Works matching IS 13674803 AND DT 2016 AND VI 32 AND IP 14

Results: 32

ASAFE: ancestry-specific allele frequency estimation.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2227, doi. 10.1093/bioinformatics/btw220

By:

Zhang, Qian S.;
Browning, Brian L.;
Browning, Sharon R.

Publication type:

Article

Incorporating organelle correlations into semi-supervised learning for protein subcellular localization prediction.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2184, doi. 10.1093/bioinformatics/btw219

By:

Ying-Ying Xu;
Fan Yang;
Hong-Bin Shen

Publication type:

Article

Beta-Poisson model for single-cell RNA-seq data analyses.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2128, doi. 10.1093/bioinformatics/btw202

By:

Vu, Trung Nghia;
Wills, Quin F.;
Kalari, Krishna R.;
Nifang Niu;
Liewei Wang;
Rantalainen, Mattias;
Pawitan, Yudi

Publication type:

Article

Estimating IBD tracts from low coverage NGS data.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2096, doi. 10.1093/bioinformatics/btw212

By:

Vieira, Filipe G.;
Albrechtsen, Anders;
Nielsen, Rasmus

Publication type:

Article

HDTD: analyzing multi-tissue gene expression data.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2193, doi. 10.1093/bioinformatics/btw224

By:

Touloumis, Anestis;
Marioni, John C.;
Tavaré, Simon

Publication type:

Article

PANTHER-PSEP: predicting disease-causing genetic variants using position-specific evolutionary preservation.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2230, doi. 10.1093/bioinformatics/btw222

By:

Haiming Tang;
Thomas, Paul D.

Publication type:

Article

e23D: database and visualization of A-to-I RNA editing sites mapped to 3D protein structures.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2213, doi. 10.1093/bioinformatics/btw204

By:

Solomon, Oz;
Eyal, Eran;
Amariglio, Ninette;
Unger, Ron;
Rechavi, Gidi

Publication type:

Article

DisGeNET-RDF: harnessing the innovative power of the Semantic Web to explore the genetic basis of diseases.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2236, doi. 10.1093/bioinformatics/btw214

By:

Queralt-Rosinach, Núria;
Piñero, Janet;
Bravo, Álex;
Sanz, Ferran;
Furlong, Laura I.

Publication type:

Article

MOLGENIS/connect: a system for semi-automatic integration of heterogeneous phenotype data with applications in biobanks.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2176, doi. 10.1093/bioinformatics/btw155

By:

Chao Pang;
van Enckevort, David;
de Haan, Mark;
Kelpin, Fleur;
Jetten, Jonathan;
Hendriksen, Dennis;
de Boer, Tommy;
Charbon, Bart;
Winder, Erwin;
van der Velde, K. Joeri;
Doiron, Dany;
Fortier, Isabel;
Hillege, Hans;
Swertz, Morris A.

Publication type:

Article

TreesimJ: a flexible, forward time population genetic simulator.

Published in:: 2016
Publication type:: Correction Notice

Inferring gene targets of drugs and chemical compounds from gene expression profiles.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2120, doi. 10.1093/bioinformatics/btw148

By:

Noh, Heeju;
Gunawan, Rudiyanto

Publication type:

Article

Quantitative phosphoproteomics-based molecular network description for high-resolution kinase-substrate interactome analysis.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2083, doi. 10.1093/bioinformatics/btw164

By:

Yuta Narushima;
Hiroko Kozuka-Hata;
Kouhei Tsumoto;
Jun-Ichiro Inoue;
Masaaki Oyama

Publication type:

Article

CaFE: a tool for binding affinity prediction using end-point free energy methods.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2216, doi. 10.1093/bioinformatics/btw215

By:

Hui Liu;
Tingjun Hou

Publication type:

Article

Ferret: a user-friendly Java tool to extract data from the 1000 Genomes Project.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2224, doi. 10.1093/bioinformatics/btw147

By:

Limou, Sophie;
Taverner, Andrew M.;
Winkler, Cheryl A.

Publication type:

Article

Minimap and miniasm: fast mapping and de novo assembly for noisy long sequences.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2103, doi. 10.1093/bioinformatics/btw152

By:

Heng Li

Publication type:

Article

LS-GKM: a new gkm-SVM for large-scale datasets.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2196, doi. 10.1093/bioinformatics/btw142

By:

Lee, Dongwon

Publication type:

Article

Haplotype synthesis analysis reveals functional variants underlying known genome-wide associated susceptibility loci.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2136, doi. 10.1093/bioinformatics/btw125

By:

Lacour, André;
Ellinghaus, David;
Schreiber, Stefan;
Franke, Andre;
Becker, Tim

Publication type:

Article

ARACNe-AP: gene network reverse engineering through adaptive partitioning inference of mutual information.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2233, doi. 10.1093/bioinformatics/btw216

By:

Lachmann, Alexander;
Giorgi, Federico M.;
Lopez, Gonzalo;
Califano, Andrea

Publication type:

Article

chopBAI: BAM index reduction solves I/O bottlenecks in the joint analysis of large sequencing cohorts.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2202, doi. 10.1093/bioinformatics/btw149

By:

Kehr, Birte;
Melsted, Páll

Publication type:

Article

SAMFIRE: multi-locus variant calling for time-resolved sequence data.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2208, doi. 10.1093/bioinformatics/btw205

By:

Illingworth, C. J. R.

Publication type:

Article

Dr.seq: a quality control and analysis pipeline for droplet sequencing.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2221, doi. 10.1093/bioinformatics/btw174

By:

Xiao Huo;
Sheng'en Hu;
Chengchen Zhao;
Yong Zhang

Publication type:

Article

gkmSVM: an R package for gapped-kmer SVM.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2205, doi. 10.1093/bioinformatics/btw203

By:

Ghandi, Mahmoud;
Mohammad-Noori, Morteza;
Ghareghani, Narges;
Lee, Dongwon;
Garraway, Levi;
Beer, Michael A.

Publication type:

Article

Integrated genome browser: visual analytics platform for genomics.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2089, doi. 10.1093/bioinformatics/btw069

By:

Freese, Nowlan H.;
Norris, David C.;
Loraine, Ann E.

Publication type:

Article

SCell: integrated analysis of single-cell RNA-seq data.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2219, doi. 10.1093/bioinformatics/btw201

By:

Diaz, Aaron;
Liu, Siyuan J.;
Sandoval, Carmen;
Pollen, Alex;
Nowakowski, Tom J.;
Lim, Daniel A.;
Kriegstein, Arnold

Publication type:

Article

jSplice: a high-performance method for accurate prediction of alternative splicing events and its application to large-scale renal cancer transcriptome data.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2111, doi. 10.1093/bioinformatics/btw145

By:

Christinat, Yann;
Pawłowski, Rafał;
Krek, Wilhelm

Publication type:

Article

Spectral identification of topological domains.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2151, doi. 10.1093/bioinformatics/btw221

By:

Jie Chen;
HeroIII, Alfred O.;
Rajapakse, Indika

Publication type:

Article

Detecting critical state before phase transition of complex biological systems by hidden Markov model.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2143, doi. 10.1093/bioinformatics/btw154

By:

Pei Chen;
Rui Liu;
Yongjun Li;
Luonan Chen

Publication type:

Article

rnaQUAST: a quality assessment tool for de novo transcriptome assemblies.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2210, doi. 10.1093/bioinformatics/btw218

By:

Bushmanova, Elena;
Antipov, Dmitry;
Lapidus, Alla;
Suvorov, Vladimir;
Prjibelski, Andrey D.

Publication type:

Article

MeCorS: Metagenome-enabled error correction of single cell sequencing reads.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2199, doi. 10.1093/bioinformatics/btw144

By:

Bremges, Andreas;
Singer, Esther;
Woyke, Tanja;
Sczyrba, Alexander

Publication type:

Article

APPAGATO: an APproximate PArallel and stochastic GrAph querying TOol for biological networks.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2159, doi. 10.1093/bioinformatics/btw223

By:

Bonnici, Vincenzo;
Busato, Federico;
Micale, Giovanni;
Bombieri, Nicola;
Pulvirenti, Alfredo;
Giugno, Rosalba

Publication type:

Article

Characterizing gene sets using discriminative random walks with restart on heterogeneous biological networks.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2167, doi. 10.1093/bioinformatics/btw151

By:

Blatti, Charles;
Sinha, Saurabh

Publication type:

Article

SharpViSu: integrated analysis and segmentation of super-resolution microscopy data.

Published in:

Bioinformatics, 2016, v. 32, n. 14, p. 2239, doi. 10.1093/bioinformatics/btw123

By:

Andron, Leonid;
Lutz, Yves;
Vonesch, Jean-Luc;
Klaholz, Bruno P.

Publication type:

Article