Works matching IS 13674803 AND DT 2016 AND VI 32 AND IP 11

Results: 26

A zero-inflated Poisson model for insertion tolerance analysis of genes based on Tn-seq data.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1701, doi. 10.1093/bioinformatics/btw061

By:

Fangfang Liu;
Chong Wang;
Zuowei Wu;
Qijing Zhang;
Peng Liu

Publication type:

Article

Model-based media selection to minimize the cost of metabolic cooperation in microbial ecosystems.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1733, doi. 10.1093/bioinformatics/btw062

By:

Zampieri, Mattia;
Sauer, Uwe

Publication type:

Article

Optimal seed solver: optimizing seed selection in read mapping.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1632, doi. 10.1093/bioinformatics/btv670

By:

Hongyi Xin;
Nahar, Sunny;
Zhu, Richard;
Emmons, John;
Pekhimenko, Gennady;
Kingsford, Carl;
Alkan, Can;
Mutl, Onur

Publication type:

Article

Identification of hierarchical chromatin domains.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1601, doi. 10.1093/bioinformatics/btv485

By:

Weinreb, Caleb;
Raphael, Benjamin J.

Publication type:

Article

Efficient privacy-preserving string search and an application in genomics.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1652, doi. 10.1093/bioinformatics/btw050

By:

Kana Shimizu;
Koji Nuida;
Rätsch, Gunnar

Publication type:

Article

HAPCOL: accurate and memory-efficient haplotype assembly from long reads.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1610, doi. 10.1093/bioinformatics/btv495

By:

Pirola, Yuri;
Zaccaria, Simone;
Dondi, Riccardo;
Klau, Gunnar W.;
Pisanti, Nadia;
Bonizzoni, Paola

Publication type:

Article

An integrative somatic mutation analysis to identify pathways linked with survival outcomes across 19 cancer types.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1643, doi. 10.1093/bioinformatics/btv692

By:

Sunho Park;
Seung-Jun Kim;
Donghyeon Yu;
Peña-Llopis, Samuel;
Jianjiong Gao;
Jin Suk Park;
Beibei Chen;
Norris, Jessie;
Xinlei Wang;
Min Chen;
Minsoo Kim;
Jeongsik Yong;
Wardak, Zabi;
Choe, Kevin;
Story, Michael;
Starr, Timothy;
Jae-Ho Cheong;
Tae Hyun Hwang

Publication type:

Article

The geospatial data quality REST API for primary biodiversity data.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1755, doi. 10.1093/bioinformatics/btw057

By:

Otegui, Javier;
Guralnick, Robert P.

Publication type:

Article

BCFtools/RoH: a hidden Markov model approach for detecting autozygosity from next-generation sequencing data.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1749, doi. 10.1093/bioinformatics/btw044

By:

Narasimhan, Vagheesh;
Danecek, Petr;
Scally, Aylwyn;
Yali Xue;
Tyler-Smith, Chris;
Durbin, Richard

Publication type:

Article

Unipept web services for metaproteomics analysis.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1746, doi. 10.1093/bioinformatics/btw039

By:

Mesuere, Bart;
Willems, Toon;
Van der Jeugt, Felix;
Devreese, Bart;
Vandamme, Peter;
Dawyndt, Peter

Publication type:

Article

metaModules identifies key functional subnetworks in microbiome-related disease.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1678, doi. 10.1093/bioinformatics/btv526

By:

May, Ali;
Brandt, Bernd W.;
El-Kebir, Mohammed;
Klau, Gunnar W.;
Zaura, Egija;
Crielaard, Wim;
Heringa, Jaap;
Abeln, Sanne

Publication type:

Article

FastLSU: a more practical approach for the Benjamini--Hochberg FDR controlling procedure for huge-scale testing problems.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1716, doi. 10.1093/bioinformatics/btw029

By:

Madar, Vered;
Batista, Sandra

Publication type:

Article

ASDB: a resource for probing protein functions with small molecules.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1752, doi. 10.1093/bioinformatics/btw055

By:

Zhihong Liu;
Peng Ding;
Xin Yan;
Minghao Zheng;
Huihao Zhou;
Yuehua Xu;
Yunfei Du;
Qiong Gu;
Jun Xu

Publication type:

Article

Protein Database, Human Retinal Pigment Epithelium.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 37

By:

West, Karen A.;
Lin Yan;
Shadrach, Karen;
Jian Sun;
Hasan, Azeem;
Miyagi, Masaru;
Crabb, John S.;
Hollyfield, Joe G.;
Marmorstein, Alan D.;
Crabb, John W.

Publication type:

Article

rHAT: fast alignment of noisy long reads with regional hashing.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1625, doi. 10.1093/bioinformatics/btv662

By:

Bo Liu;
Dengfeng Guan;
Mingxiang Teng;
Yadong Wang

Publication type:

Article

Reveel: large-scale population genotyping using low-coverage sequencing data.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1686, doi. 10.1093/bioinformatics/btv530

By:

Lin Huang;
Bo Wang;
Ruitang Chen;
Bercovici, Sivan;
Batzoglou, Serafim

Publication type:

Article

Library of binding protein scaffolds (LibBP): a computational platform for selection of binding protein scaffolds.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1709, doi. 10.1093/bioinformatics/btw032

By:

Seungpyo Hong;
Dongsup Kim

Publication type:

Article

Quantitative trait association study for mean telomere length in the South Asian genomes.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1697, doi. 10.1093/bioinformatics/btw027

By:

Hakobyan, Anna;
Nersisyan, Lilit;
Arakelyan, Arsen

Publication type:

Article

Message from the ISCB: 2016 Outstanding Contributions to ISCB Award: Burkhard Rost.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1760, doi. 10.1093/bioinformatics/btw292

By:

Fogg, Christiana N.;
Kovats, Diane K.

Publication type:

Article

Message from the ISCB: 2016 ISCB Accomplishment by a Senior Scientist Award Given to Søren Brunak.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1758, doi. 10.1093/bioinformatics/btw291

By:

Fogg, Christiana N.;
Kovats, Diane K.

Publication type:

Article

Informed kmer selection for de novo transcriptome assembly.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1670, doi. 10.1093/bioinformatics/btw217

By:

Durai, Dilip A.;
Schulz, Marcel H.

Publication type:

Article

methylFlow: cell-specific methylation pattern reconstruction from high-throughput bisulfite-converted DNA sequencing.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1618, doi. 10.1093/bioinformatics/btw287

By:

Dorri, Faezeh;
Mendelowitz, Lee;
Corrada Bravo, Héctor

Publication type:

Article

BioCircos.js: an interactive Circos JavaScript library for biological data visualization on web applications.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1740, doi. 10.1093/bioinformatics/btw041

By:

Ya Cui;
Xiaowei Chen;
Huaxia Luo;
Zhen Fan;
Jianjun Luo;
Shunmin He;
Haiyan Yue;
Peng Zhang;
Runsheng Chen

Publication type:

Article

Integrative analysis for identifying joint modular patterns of gene-expression and drug-response data.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1724, doi. 10.1093/bioinformatics/btw059

By:

Jinyu Chen;
Shihua Zhang

Publication type:

Article

Galaxy Portal: interacting with the galaxy platform through mobile devices.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1743, doi. 10.1093/bioinformatics/btw042

By:

Børnich, Claus;
Grytten, Ivar;
Hovig, Eivind;
Paulsen, Jonas;
Čech, Martin;
Kjetil Sandve, Geir

Publication type:

Article

Cell-free DNA fragment-size distribution analysis for non-invasive prenatal CNV prediction.

Published in:

Bioinformatics, 2016, v. 32, n. 11, p. 1662, doi. 10.1093/bioinformatics/btw178

By:

Arbabi, Aryan;
Rampášek, Ladislav;
Brudno, Michael

Publication type:

Article