Works matching IS 13674803 AND DT 2016 AND VI 32 AND IP 10

Results: 31

DesignSignatures: a tool for designing primers that yields amplicons with distinct signatures.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1565, doi. 10.1093/bioinformatics/btw047

By:

Wright, Erik S.;
Vetsigian, Kalin H.

Publication type:

Article

ELASPIC web-server: proteome-wide structure-based prediction of mutation effects on protein stability and binding affinity.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1589, doi. 10.1093/bioinformatics/btw031

By:

Witvliet, Daniel K.;
Strokach, Alexey;
Giraldo-Forero, Andrés. Felipe;
Teyra, Joan;
Colak, Recep;
Kim, Philip M.

Publication type:

Article

FILTUS: a desktop GUI for fast and efficient detection of disease-causing variants, including a novel autozygosity detector.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1592, doi. 10.1093/bioinformatics/btw046

By:

Vigeland, Magnus D.;
Gjøtterud, Kristina S.;
Selmer, Kaja K.

Publication type:

Article

EPI-peptide designer: a tool for designing peptide ligand libraries based on epitope--paratope interactions.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1462, doi. 10.1093/bioinformatics/btw014

By:

Viart, B.;
Dias-Lopes, C.;
Kozlova, E.;
Oliveira, C. F. B.;
Nguyen, C.;
Neshich, G.;
Chávez-Olórtegui, C.;
Molina, F.;
Felicori, L. F.

Publication type:

Article

lodGWAS: a software package for genome-wide association analysis of biomarkers with a limit of detection.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1552, doi. 10.1093/bioinformatics/btw021

By:

Vaez, Ahmad;
van der Most, Peter J.;
Prins, Bram P.;
Snieder, Harold;
van den Heuvel, Edwin;
Alizadeh, Behrooz Z.;
Nolte, Ilja M.

Publication type:

Article

PAA: an R/bioconductor package for biomarker discovery with protein microarrays.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1577, doi. 10.1093/bioinformatics/btw037

By:

Turewicz, Michael;
Ahrens, Maike;
May, Caroline;
Marcus, Katrin;
Eisenacher, Martin

Publication type:

Article

TFBSTools: an R/bioconductor package for transcription factor binding site analysis.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1555, doi. 10.1093/bioinformatics/btw024

By:

Ge Tan;
Lenhard, Boris

Publication type:

Article

Orthogonal matrix factorization enables integrative analysis of multiple RNA binding proteins.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1527, doi. 10.1093/bioinformatics/btw003

By:

Stražar, Martin;
Žitnik, Marinka;
Zupan, Blaž;
Ule, Jernej;
Curk, Tomaž

Publication type:

Article

Multi-omics enrichment analysis using the GeneTrail2 web service.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1502, doi. 10.1093/bioinformatics/btv770

By:

Stöckel, Daniel;
Kehl, Tim;
Trampert, Patrick;
Schneider, Lara;
Backes, Christina;
Ludwig, Nicole;
Gerasch, Andreas;
Kaufmann, Michael;
Gessler, Manfred;
Graf, Norbert;
Meese, Eckart;
Keller, Andreas;
Lenhof, Hans-Peter

Publication type:

Article

Protein backbone ensemble generation explores the local structural space of unseen natural homologs.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1454, doi. 10.1093/bioinformatics/btw001

By:

Schenkelberg, Christian D.;
Bystroff, Christopher

Publication type:

Article

Vasohibins: new transglutaminase-like cysteine proteases possessing a non-canonical Cys-His-Ser catalytic triad.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1441, doi. 10.1093/bioinformatics/btv761

By:

Sanchez-Pulido, Luis;
Ponting, Chris P.

Publication type:

Article

FamAgg: an R package to evaluate familial aggregation of traits in large pedigrees.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1583, doi. 10.1093/bioinformatics/btw019

By:

Rainer, Johannes;
Taliun, Daniel;
D'Elia, Yuri;
Pattaro, Cristian;
Domingues, Francisco S.;
Weichenberger, Christian X.

Publication type:

Article

Differential methylation analysis for BS-seq data under general experimental design.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1446, doi. 10.1093/bioinformatics/btw026

By:

Yongseok Park;
Hao Wu

Publication type:

Article

Fast and efficient QTL mapper for thousands of molecular phenotypes.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1479, doi. 10.1093/bioinformatics/btv722

By:

Ongen, Halit;
Buil, Alfonso;
Brown, Andrew Anand;
Dermitzakis, Emmanouil T.;
Delaneau, Olivier

Publication type:

Article

Multi-task consensus clustering of genome-wide transcriptomes from related biological conditions.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1509, doi. 10.1093/bioinformatics/btw007

By:

Zhen Niu;
Chasman, Deborah;
Eisfeld, Amie J.;
Yoshihiro Kawaoka;
Roy, Sushmita

Publication type:

Article

MultiGeMS: detection of SNVs from multiple samples using model selection on high-throughput sequencing data.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1486, doi. 10.1093/bioinformatics/btv753

By:

Murillo, Gabriel H.;
Na You;
Xiaoquan Su;
Wei Cui;
Reilly, Muredach P.;
Mingyao Li;
Kang Ning;
Xinping Cui

Publication type:

Article

BISQUE: locus- and variant-specific conversion of genomic, transcriptomic and proteomic database identifiers.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1598, doi. 10.1093/bioinformatics/btw043

By:

Meyer, Michael J.;
Geske, Philip;
Haiyuan Yu

Publication type:

Article

SIRAH tools: mapping, backmapping and visualization of coarse-grained models.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1568, doi. 10.1093/bioinformatics/btw020

By:

Machado, Matías R.;
Pantano, Sergio

Publication type:

Article

lnCaNet: pan-cancer co-expression network for human lncRNA and cancer genes.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1595, doi. 10.1093/bioinformatics/btw017

By:

Yining Liu;
Min Zhao

Publication type:

Article

Alloscore: a method for predicting allosteric ligand--protein interactions.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1574, doi. 10.1093/bioinformatics/btw036

By:

Shuai Li;
Qiancheng Shen;
Minyi Su;
Xinyi Liu;
Shaoyong Lu;
Zhongjie Chen;
Renxiao Wang;
Jian Zhang

Publication type:

Article

MuCor: mutation aggregation and correlation.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1557, doi. 10.1093/bioinformatics/btw028

By:

Kroll, Karl W.;
Eisfeld, Ann-Katherin;
Lozanski, Gerard;
Bloomfield, Clara D.;
Byrd, John C.;
Blachly, James S.

Publication type:

Article

Inclusion of dyad-repeat pattern improves topology prediction of transmembrane β-barrel proteins.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1571, doi. 10.1093/bioinformatics/btw025

By:

Hayat, Sikander;
Peters, Christoph;
Nanjiang Shu;
Tsirigos, Konstantinos D.;
Elofsson, Arne

Publication type:

Article

ParDRe: faster parallel duplicated reads removal tool for sequencing studies.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1562, doi. 10.1093/bioinformatics/btw038

By:

González-Domínguez, Jorge;
Schmidt, Bertil

Publication type:

Article

Structured sparse canonical correlation analysis for brain imaging genetics: an improved GraphNet method.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1544, doi. 10.1093/bioinformatics/btw033

By:

Lei Du;
Heng Huang;
Jingwen Yan;
Sungeun Kim;
Risacher, Shannon L.;
Inlow, Mark;
Moore, Jason H.;
Saykin, Andrew J.;
Li Shen

Publication type:

Article

GeneValidator: identify problems with protein-coding gene predictions.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1559, doi. 10.1093/bioinformatics/btw015

By:

Drăgan, Monica-Andreea;
Moghul, Ismail;
Priyam, Anurag;
Bustos, Claudio;
Wurm, Yannick

Publication type:

Article

ConceptMetab: exploring relationships among metabolite sets to identify links among biomedical concepts.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1536, doi. 10.1093/bioinformatics/btw016

By:

Cavalcante, Raymond G.;
Patil, Snehal;
Weymouth, Terry E.;
Bendinskas, Kestutis G.;
Karnovsky, Alla;
Sartor, Maureen A.

Publication type:

Article

Sampletrees and Rsampletrees: sampling gene genealogies conditional on SNP genotype data.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1580, doi. 10.1093/bioinformatics/btv763

By:

Burkett, Kelly M.;
McNeney, Brad;
Graham, Jinko

Publication type:

Article

Piecewise parameter estimation for stochastic models in COPASI.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1586, doi. 10.1093/bioinformatics/btv759

By:

Bergmann, Frank T.;
Sahle, Sven;
Zimmer, Christoph

Publication type:

Article

FINEMAP: efficient variable selection using summary data from genome-wide association studies.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1493, doi. 10.1093/bioinformatics/btw018

By:

Benner, Christian;
Spencer, Chris C. A.;
Havulinna, Aki S.;
Salomaa, Veikko;
Ripatti, Samuli;
Pirinen, Matti

Publication type:

Article

MS-REDUCE: an ultrafast technique for reduction of big mass spectrometry data for high-throughput processing.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1518, doi. 10.1093/bioinformatics/btw023

By:

Awan, Muaaz Gul;
Saeed, Fahad

Publication type:

Article

Computational approaches to define a human milk metaglycome.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1471, doi. 10.1093/bioinformatics/btw048

By:

Agravat, Sanjay B.;
Xuezheng Song;
Rojsajjakul, Teerapat;
Cummings, Richard D.;
Smith, David F.

Publication type:

Article