Works matching IS 13674803 AND DT 2015 AND VI 31 AND IP 7
Results: 65
Cooperative development of logical modelling standards and tools with CoLoMoTo.
- Published in:
- Bioinformatics, 2015, v. 31, n. 7, p. 1154, doi. 10.1093/bioinformatics/btv013
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- Article
Lipid-Pro: a computational lipid identification solution for untargeted lipidomics on data-independent acquisition tandem mass spectrometry platforms.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1150, doi. 10.1093/bioinformatics/btu796
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- Article
A logical model of HIV-1 interactions with the T-cell activation signalling pathway.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1075, doi. 10.1093/bioinformatics/btu787
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- Article
Promiscuous mRNA splicing under the control of AIRE in medullary thymic epithelial cells.
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- Bioinformatics, 2015, v. 31, n. 7, p. 986, doi. 10.1093/bioinformatics/btu785
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- Publication type:
- Article
A bio-inspired computing model for ovarian carcinoma classification and oncogene detection.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1102, doi. 10.1093/bioinformatics/btu782
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- Article
Mechanotransduction map: simulation model, molecular pathway, gene set.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1053, doi. 10.1093/bioinformatics/btu776
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- Article
DISSECT: an assignment-free Bayesian discovery method for species delimitation under the multispecies coalescent.
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- Bioinformatics, 2015, v. 31, n. 7, p. 991, doi. 10.1093/bioinformatics/btu770
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- Article
genomation: a toolkit to summarize, annotate and visualize genomic intervals.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1127, doi. 10.1093/bioinformatics/btu775
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- Article
Molecular principles of human virus protein–protein interactions.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1025, doi. 10.1093/bioinformatics/btu763
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- Article
NucleusJ: an ImageJ plugin for quantifying 3D images of interphase nuclei.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1144, doi. 10.1093/bioinformatics/btu774
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- Article
Single-cell transcriptional analysis to uncover regulatory circuits driving cell fate decisions in early mouse development.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1060, doi. 10.1093/bioinformatics/btu777
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- Article
The Victor C++ library for protein representation and advanced manipulation.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1138, doi. 10.1093/bioinformatics/btu773
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- Article
Ustiloxins, fungal cyclic peptides, are ribosomally synthesized in Ustilaginoidea virens.
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- Bioinformatics, 2015, v. 31, n. 7, p. 981, doi. 10.1093/bioinformatics/btu753
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- Article
HyDRA: gene prioritization via hybrid distance-score rank aggregation.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1034, doi. 10.1093/bioinformatics/btu766
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- Article
Unsupervised discovery of information structure in biomedical documents.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1084, doi. 10.1093/bioinformatics/btu758
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- Article
XenoSite server: a web-available site of metabolism prediction tool.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1136, doi. 10.1093/bioinformatics/btu761
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- Publication type:
- Article
SNV-PPILP: refined SNV calling for tumor data using perfect phylogenies and ILP.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1133, doi. 10.1093/bioinformatics/btu755
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- Article
Tissue-aware data integration approach for the inference of pathway interactions in metazoan organisms.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1093, doi. 10.1093/bioinformatics/btu786
- Publication type:
- Article
SAMNetWeb: identifying condition-specific networks linking signaling and transcription.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1124, doi. 10.1093/bioinformatics/btu748
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- Publication type:
- Article
Multilevel regularized regression for simultaneous taxa selection and network construction with metagenomic count data.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1067, doi. 10.1093/bioinformatics/btu778
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- Publication type:
- Article
LuciPHOr2: site localization of generic post-translational modifications from tandem mass spectrometry data.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1141, doi. 10.1093/bioinformatics/btu788
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- Publication type:
- Article
Efficient searching and annotation of metabolic networks using chemical similarity.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1016, doi. 10.1093/bioinformatics/btu760
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- Article
Bioimaging-based detection of mislocalized proteins in human cancers by semi-supervised learning.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1111, doi. 10.1093/bioinformatics/btu772
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- Article
LigDig: a web server for querying ligand–protein interactions.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1147, doi. 10.1093/bioinformatics/btu784
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- Publication type:
- Article
MetaPSICOV: combining coevolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins.
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- Bioinformatics, 2015, v. 31, n. 7, p. 999, doi. 10.1093/bioinformatics/btu791
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- Publication type:
- Article
MGAS: a powerful tool for multivariate gene-based genome-wide association analysis.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1007, doi. 10.1093/bioinformatics/btu783
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- Publication type:
- Article
QuasR: quantification and annotation of short reads in R.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1130, doi. 10.1093/bioinformatics/btu781
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- Article
Biological Dynamics Markup Language (BDML): an open format for representing quantitative biological dynamics data.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1044, doi. 10.1093/bioinformatics/btu767
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- Publication type:
- Article
CRISPRdirect: software for designing CRISPR/Cas guide RNA with reduced off-target sites.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1120, doi. 10.1093/bioinformatics/btu743
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- Article
Erratum.
- Published in:
- 2015
- Publication type:
- Correction Notice
flowCL: ontology-based cell population labelling in flow cytometry.
- Published in:
- 2015
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- Publication type:
- Product Review
SNiPA: an interactive, genetic variant-centered annotation browser.
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- 2015
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- Publication type:
- Product Review
ICMA: an integrated cardiac modeling and analysis platform.
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- 2015
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- Publication type:
- Product Review
MpTheory Java library: a multi-platform Java library for systems biology based on the Metabolic P theory.
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- 2015
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- Publication type:
- Product Review
NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy.
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- 2015
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- Publication type:
- Product Review
3Dmol.js: molecular visualization with WebGL.
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- 2015
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- Publication type:
- Product Review
HYCUD: a computational tool for prediction of effective rotational correlation time in flexible proteins.
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- 2015
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- Publication type:
- Product Review
Detection of circular permutations within protein structures using CE-CP.
- Published in:
- Bioinformatics, 2015, v. 31, n. 7, p. 1316, doi. 10.1093/bioinformatics/btu823
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- Publication type:
- Article
PEASE: predicting B-cell epitopes utilizing antibody sequence.
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- 2015
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- Publication type:
- Product Review
Phy-Mer: a novel alignment-free and reference-independent mitochondrial haplogroup classifier.
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- 2015
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- Publication type:
- Product Review
repDNA: a Python package to generate various modes of feature vectors for DNA sequences by incorporating user-defined physicochemical properties and sequence-order effects.
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- 2015
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- Publication type:
- Product Review
Kablammo: an interactive, web-based BLAST results visualizer.
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- 2015
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- Publication type:
- Product Review
GenePainter v. 2.0 resolves the taxonomic distribution of intron positions.
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- 2015
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- Publication type:
- Product Review
Sputnik: ad hoc distributed computation.
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- 2015
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- Publication type:
- Product Review
GSDS 2.0: an upgraded gene feature visualization server.
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- 2015
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- Publication type:
- Product Review
GenomeCons: a web server for manipulating multiple genome sequence alignments and their consensus sequences.
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- 2015
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- Publication type:
- Product Review
HIPPIE: a high-throughput identification pipeline for promoter interacting enhancer elements.
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- 2015
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- Publication type:
- Product Review
Population-based structural variation discovery with Hydra-Multi.
- Published in:
- Bioinformatics, 2015, v. 31, n. 7, p. 1286, doi. 10.1093/bioinformatics/btu771
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- Publication type:
- Article
Adaptive settings for the nearest-neighbor particle tracking algorithm.
- Published in:
- Bioinformatics, 2015, v. 31, n. 7, p. 1279, doi. 10.1093/bioinformatics/btu793
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- Publication type:
- Article
The chemical component dictionary: complete descriptions of constituent molecules in experimentally determined 3D macromolecules in the Protein Data Bank.
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- Bioinformatics, 2015, v. 31, n. 7, p. 1274, doi. 10.1093/bioinformatics/btu789
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- Publication type:
- Article