Works matching IS 13674803 AND DT 2015 AND VI 31 AND IP 24

Results: 32

Bayexer: an accurate and fast Bayesian demultiplexer for Illumina sequences.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4000, doi. 10.1093/bioinformatics/btv501

By:

Haisi Yi;
Zhe Li;
Tao Li;
Jindong Zhao

Publication type:

Article

A hybrid bayesian approach for genome-wide association studies on related individuals.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3890, doi. 10.1093/bioinformatics/btv496

By:

Yazdani, A.;
Dunson, D. B.

Publication type:

Article

LIBRA: LIgand Binding site Recognition Application.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4020, doi. 10.1093/bioinformatics/btv489

By:

Hung, Le Viet;
Caprari, Silvia;
Bizai, Massimiliano;
Toti, Daniele;
Polticelli, Fabio

Publication type:

Article

svviz: a read viewer for validating structural variants.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3994, doi. 10.1093/bioinformatics/btv478

By:

Spies, Noah;
Zook, Justin M.;
Salit, Marc;
Sidow, Arend

Publication type:

Article

Deciphering the associations between gene expression and copy number alteration using a sparse double Laplacian shrinkage approach.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3977, doi. 10.1093/bioinformatics/btv518

By:

Xingjie Shi;
Qing Zhao;
Jian Huang;
Yang Xie;
Shuangge Ma

Publication type:

Article

InteractiveROSETTA: a graphical user interface for the PyRosetta protein modeling suite.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4023, doi. 10.1093/bioinformatics/btv492

By:

Schenkelberg, Christian D.;
Bystroff, Christopher

Publication type:

Article

Hierarchical boosting: a machine-learning framework to detect and classify hard selective sweeps in human populations.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3946, doi. 10.1093/bioinformatics/btv493

By:

Pybus, Marc;
Luisi, Pierre;
Dall'Olio, Giovanni Marco;
Uzkudun, Manu;
Laayouni, Hafid;
Bertranpetit, Jaume;
Engelken, Johannes

Publication type:

Article

BiopLib and BiopTools--a C programming library and toolset for manipulating protein structure.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4017, doi. 10.1093/bioinformatics/btv482

By:

Porter, Craig T.;
Martin, Andrew C. R.

Publication type:

Article

Cas-Designer: a web-based tool for choice of CRISPR-Cas9 target sites.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4014, doi. 10.1093/bioinformatics/btv537

By:

Jeongbin Park;
Sangsu Bae;
Jin-Soo Kim

Publication type:

Article

database.bio: a web application for interpreting human variations.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4035, doi. 10.1093/bioinformatics/btv500

By:

Min Ou;
Ricky Ma;
Jeanno Cheung;
Katie Lo;
Yee, Patrick;
Tewei Luo;
Chan, T. L.;
Chun Hang Au;
Ava Kwong;
Ruibang Luo;
Tak-Wah Lam

Publication type:

Article

An integrated structure- and system-based framework to identify new targets of metabolites and known drugs.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3922, doi. 10.1093/bioinformatics/btv477

By:

Naveed, Hammad;
Hameed, Umar S.;
Harrus, Deborah;
Bourguet, William;
Arold, Stefan T.;
Xin Gao

Publication type:

Article

Integrated structure- and ligand-based in silico approach to predict inhibition of cytochrome P450 2D6.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3930, doi. 10.1093/bioinformatics/btv486

By:

Martiny, Virginie Y.;
Carbonell, Pablo;
Chevillard, Florent;
Moroy, Gautier;
Nicot, Arnaud B.;
Vayer, Philippe;
Villoutreix, Bruno O.;
Miteva, Maria A.

Publication type:

Article

EPGA2: memory-efficient de novo assembler.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3988, doi. 10.1093/bioinformatics/btv487

By:

Junwei Luo;
JianxinWang;
Weilong Li;
Zhen Zhang;
Fang-Xiang Wu;
Min Li;
Yi Pan

Publication type:

Article

GenomeLaser: fast and accurate haplotyping from pedigree genotypes.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3984, doi. 10.1093/bioinformatics/btv452

By:

Wenzhi Li;
Guoxing Fu;
Weinian Rao;
Wei Xu;
Li Ma;
Shiwen Guo;
Qing Song

Publication type:

Article

NgsRelate: a software tool for estimating pairwise relatedness from next-generation sequencing data.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4009, doi. 10.1093/bioinformatics/btv509

By:

Korneliussen, Thorfinn Sand;
Moltke, Ida

Publication type:

Article

HiXCorr: a portable high-speed X<sub>Corr</sub> engine for high-resolution tandem mass spectrometry.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4026, doi. 10.1093/bioinformatics/btv490

By:

Hyunwoo Kim;
Hosung Jo;
Heejin Park;
Eunok Paek

Publication type:

Article

Fast and accurate approximate inference of transcript expression from RNA-seq data.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3881, doi. 10.1093/bioinformatics/btv483

By:

Hensman, James;
Papastamoulis, Panagiotis;
Glaus, Peter;
Honkela, Antti;
Rattray, Magnus

Publication type:

Article

Benchmark analysis of algorithms for determining and quantifying full-length mRNA splice forms from RNA-seq data.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3938, doi. 10.1093/bioinformatics/btv488

By:

Hayer, Katharina E.;
Pizarro, Angel;
Lahens, Nicholas F.;
Hogenesch, John B.;
Grant, Gregory R.

Publication type:

Article

RNASeqMetaDB: a database and web server for navigating metadata of publicly available mouse RNA-Seq datasets.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4038, doi. 10.1093/bioinformatics/btv503

By:

Zhengyu Guo;
Tzvetkova, Boriana;
Bassik, Jennifer M.;
Bodziak, Tara;
Wojnar, Brianna M.;
Wei Qiao;
Obaida, Md A.;
Nelson, Sacha B.;
Bo Hua Hu;
Peng Yu

Publication type:

Article

An interactive genome browser of association results from the UK10K cohorts project.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4029, doi. 10.1093/bioinformatics/btv491

By:

Geihs, Matthias;
Ying Yan;
Walter, Klaudia;
Jie Huang;
Memari, Yasin;
Min, Josine L.;
Mead, Daniel;
Hubbard, Tim J.;
Timpson, Nicholas J.;
Down, Thomas A.;
Soranzo, Nicole

Publication type:

Article

BS-SNPer: SNP calling in bisulfite-seq data.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4006, doi. 10.1093/bioinformatics/btv507

By:

Shengjie Gao;
Dan Zou;
Likai Mao;
Huayu Liu;
Pengfei Song;
Youguo Chen;
Shancen Zhao;
Changduo Gao;
Xiangchun Li;
Zhibo Gao;
Xiaodong Fang;
Huanming Yang;
Ørntoft, Torben F.;
Sørensen, Karina D.;
Bolund, Lars

Publication type:

Article

Learning directed acyclic graphical structures with genetical genomics data.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3953, doi. 10.1093/bioinformatics/btv513

By:

Bin Gao;
Yuehua Cui

Publication type:

Article

CoD: inferring immune-cell quantities related to disease states.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3961, doi. 10.1093/bioinformatics/btv498

By:

Frishberg, Amit;
Steuerman, Yael;
Gat-Viks, Irit

Publication type:

Article

Pairwise RNA secondary structure alignment with conserved stem pattern.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3914, doi. 10.1093/bioinformatics/btv471

By:

Jimmy Ka Ho Chiu;
Yi-Ping Phoebe Chen

Publication type:

Article

glmgraph: an R package for variable selection and predictive modeling of structured genomic data.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3991, doi. 10.1093/bioinformatics/btv497

By:

Li Chen;
Han Liu;
Kocher, Jean-Pierre A.;
Hongzhe Li;
Jun Chen

Publication type:

Article

msa: an R package for multiple sequence alignment.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3997, doi. 10.1093/bioinformatics/btv494

By:

Bodenhofer, Ulrich;
Bonatesta, Enrico;
Horejš-Kainrath, Christoph;
Hochreiter, Sepp

Publication type:

Article

ABIF Manager: simple reading and editing of ABIF formatted files.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4012, doi. 10.1093/bioinformatics/btv512

By:

Beran, Pavel;
Mraz, Ivan

Publication type:

Article

Discovering hospital admission patterns using models learnt from electronic hospital records.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3970, doi. 10.1093/bioinformatics/btv508

By:

Arandjelović, Ognjen

Publication type:

Article

DIGGIT: a Bioconductor package to infer genetic variants driving cellular phenotypes.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4032, doi. 10.1093/bioinformatics/btv499

By:

Alvarez, Mariano J.;
Chen, James C.;
Califano, Andrea

Publication type:

Article

RASER: reads aligner for SNPs and editing sites of RNA.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3906, doi. 10.1093/bioinformatics/btv505

By:

Jaegyoon Ahn;
Xinshu Xiao

Publication type:

Article

LncRNA-ID: Long non-coding RNA IDentification using balanced random forests.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3897, doi. 10.1093/bioinformatics/btv480

By:

Achawanantakun, Rujira;
Jiao Chen;
Yanni Sun;
Yuan Zhang

Publication type:

Article

BigBWA: approaching the Burrows-Wheeler aligner to Big Data technologies.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 4003, doi. 10.1093/bioinformatics/btv506

By:

Abuin, José M.;
Pichel, Juan C.;
Pena, Tomás F.;
Amigo, Jorge

Publication type:

Article