Works matching IS 13674803 AND DT 2014 AND VI 30 AND IP 4

Results: 27

Chemical structure informing statistical hypothesis testing in metabolomics.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 514, doi. 10.1093/bioinformatics/btt708

By:

Zhu, Hongjie;
Luo, Man

Publication type:

Article

A combinatorial approach to graphlet counting.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 559

By:

Hočevar, Tomaž;
Demšar, Janez

Publication type:

Article

DIVE: a data intensive visualization engine.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 593, doi. 10.1093/bioinformatics/btt721

By:

Bromley, Dennis;
Rysavy, Steven J.;
Su, Robert;
Toofanny, Rudesh D.;
Schmidlin, Tom;
Daggett, Valerie

Publication type:

Article

Accurate identification of polyadenylation sites from 3′ end deep sequencing using a naïve Bayes classifier.

Published in:

2014

By:

Sheppard, Sarah;
Lawson, Nathan D.;
Zhu, Lihua Julie

Publication type:

Correction Notice

NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 566, doi. 10.1093/bioinformatics/btt702

By:

Leggett, Richard M.;
Clavijo, Bernardo J.;
Clissold, Leah;
Clark, Matthew D.;
Caccamo, Mario

Publication type:

Article

forqs: forward-in-time simulation of recombination, quantitative traits and selection.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 576, doi. 10.1093/bioinformatics/btt712

By:

Kessner, Darren;
Novembre, John

Publication type:

Article

BETASEQ: a powerful novel method to control type-I error inflation in partially sequenced data for rare variant association testing.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 480, doi. 10.1093/bioinformatics/btt719

By:

Yan, Song;
Li, Yun

Publication type:

Article

Cascade: a R package to study, predict and simulate the diffusion of a signal through a temporal gene network.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 571, doi. 10.1093/bioinformatics/btt705

By:

Jung, Nicolas;
Bertrand, Frédéric;
Bahram, Seiamak;
Vallat, Laurent;
Maumy-Bertrand, Myriam

Publication type:

Article

ORCA: a COBRA toolbox extension for model-driven discovery and analysis.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 584, doi. 10.1093/bioinformatics/btt723

By:

Mao, Longfei;
Verwoerd, Wynand S.

Publication type:

Article

A hierarchical statistical modeling approach to analyze proteomic isobaric tag for relative and absolute quantitation data.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 549, doi. 10.1093/bioinformatics/btt722

By:

Zhou, Cong;
Walker, Michael J.;
Williamson, Andrew J. K.;
Pierce, Andrew;
Berzuini, Carlo;
Dive, Caroline;
Whetton, Anthony D.

Publication type:

Article

slaMEM: efficient retrieval of maximal exact matches using a sampled LCP array.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 464, doi. 10.1093/bioinformatics/btt706

By:

Fernandes, Francisco;
Freitas, Ana T.

Publication type:

Article

Combining evolutionary information extracted from frequency profiles with sequence-based kernels for protein remote homology detection.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 472, doi. 10.1093/bioinformatics/btt709

By:

Liu, Bin;
Zhang, Deyuan;
Xu, Ruifeng;
Xu, Jinghao;
Wang, Xiaolong;
Chen, Qingcai;
Dong, Qiwen;
Chou, Kuo-Chen

Publication type:

Article

BEAMS: backbone extraction and merge strategy for the global many-to-many alignment of multiple PPI networks.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 531, doi. 10.1093/bioinformatics/btt713

By:

Alkan, Ferhat;
Erten, Cesim

Publication type:

Article

NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 540, doi. 10.1093/bioinformatics/btt715

By:

Hu, Jialu;
Kehr, Birte;
Reinert, Knut

Publication type:

Article

SILVER: an efficient tool for stable isotope labeling LC-MS data quantitative analysis with quality control methods.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 586, doi. 10.1093/bioinformatics/btt726

By:

Chang, Cheng;
Zhang, Jiyang;
Han, Mingfei;
Ma, Jie;
Zhang, Wei;
Wu, Songfeng;
Liu, Kehui;
Xie, Hongwei;
He, Fuchu;
Zhu, Yunping

Publication type:

Article

ProbeSelect: selecting differentially expressed probes in transcriptional profile data.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 574, doi. 10.1093/bioinformatics/btt720

By:

Hosur, Raghavendra;
Szak, Suzanne;
Thai, Alice;
Allaire, Norm;
Bienkowska, Jadwiga

Publication type:

Article

Causal analysis approaches in Ingenuity Pathway Analysis.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 523, doi. 10.1093/bioinformatics/btt703

By:

Krämer, Andreas;
Green, Jeff;
Pollard, Jack;
Tugendreich, Stuart

Publication type:

Article

HTS navigator: freely accessible cheminformatics software for analyzing high-throughput screening data.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 588, doi. 10.1093/bioinformatics/btt718

By:

Fourches, Denis;
Sassano, Maria F.;
Roth, Bryan L.;
Tropsha, Alexander

Publication type:

Article

RNASurface: fast and accurate detection of locally optimal potentially structured RNA segments.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 457, doi. 10.1093/bioinformatics/btt701

By:

Soldatov, Ruslan A.;
Vinogradova, Svetlana V.;
Mironov, Andrey A.

Publication type:

Article

Joint estimation of isoform expression and isoform-specific read distribution using multisample RNA-Seq data.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 506, doi. 10.1093/bioinformatics/btt704

By:

Suo, Chen;
Calza, Stefano;
Salim, Agus;
Pawitan, Yudi

Publication type:

Article

A phylogenetic Kalman filter for ancestral trait reconstruction using molecular data.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 488, doi. 10.1093/bioinformatics/btt707

By:

Lartillot, Nicolas

Publication type:

Article

ChromoHub V2: cancer genomics.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 590, doi. 10.1093/bioinformatics/btt710

By:

Shah, Muhammad A.;
Denton, Emily L.;
Liu, Lihua;
Schapira, Matthieu

Publication type:

Article

Sequence-based Gaussian network model for protein dynamics.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 497, doi. 10.1093/bioinformatics/btt716

By:

Zhang, Hua;
Kurgan, Lukasz

Publication type:

Article

HAMMER: automated operation of mass frontier to construct in silico mass spectral fragmentation libraries.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 581, doi. 10.1093/bioinformatics/btt711

By:

Zhou, Jiarui;
Weber, Ralf J. M.;
Allwood, J. William;
Mistrik, Robert;
Zhu, Zexuan;
Ji, Zhen;
Chen, Siping;
Dunn, Warwick B.;
He, Shan;
Viant, Mark R.

Publication type:

Article

GPU linear and non-linear Poisson–Boltzmann solver module for DelPhi.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 569, doi. 10.1093/bioinformatics/btt699

By:

Colmenares, José;
Ortiz, Jesús;
Rocchia, Walter

Publication type:

Article

VIRAPOPS: a forward simulator dedicated to rapidly evolved viral populations.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 578, doi. 10.1093/bioinformatics/btt724

By:

Petitjean, Michel;
Vanet, Anne

Publication type:

Article

Phylogeny-based classification of microbial communities.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 449, doi. 10.1093/bioinformatics/btt700

By:

Tanaseichuk, Olga;
Borneman, James;
Jiang, Tao

Publication type:

Article