Works matching IS 13674803 AND DT 2014 AND VI 30 AND IP 22

Results: 28

Detection of active transcription factor binding sites with the combination of DNase hypersensitivity and histone modifications.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3143, doi. 10.1093/bioinformatics/btu519

By:

Gusmao, Eduardo G.;
Dieterich, Christoph;
Zenke, Martin;
Costa, Ivan G.

Publication type:

Article

Walking the interactome for candidate prioritization in exome sequencing studies of Mendelian diseases.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3215, doi. 10.1093/bioinformatics/btu508

By:

Smedley, Damian;
Köhler, Sebastian;
Czeschik, Johanna Christina;
Amberger, Joanna;
Bocchini, Carol;
Hamosh, Ada;
Veldboer, Julian;
Zemojtel, Tomasz;
Robinson, Peter N.

Publication type:

Article

Quantitative method for the assignment of hinge and shear mechanism in protein domain movements.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3189, doi. 10.1093/bioinformatics/btu506

By:

Taylor, Daniel;
Cawley, Gavin;
Hayward, Steven

Publication type:

Article

FARVAT: a family-based rare variant association test.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3197, doi. 10.1093/bioinformatics/btu496

By:

Choi, Sungkyoung;
Lee, Sungyoung;
Cichon, Sven;
Nöthen, Markus M.;
Lange, Christoph;
Won, Sungho;
Park, Taesung

Publication type:

Article

Figmop: a profile HMM to identify genes and bypass troublesome gene models in draft genomes.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3266

By:

Gilleard, John S.;
Wasmuth, James D.;
Curran, David M.

Publication type:

Article

Trowel: a fast and accurate error correction module for Illumina sequencing reads.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3264, doi. 10.1093/bioinformatics/btu513

By:

Lim, Eun-Cheon;
Müller, Jonas;
Hagmann, Jörg;
Henz, Stefan R.;
Kim, Sang-Tae;
Weigel, Detlef

Publication type:

Article

Tracking global changes induced in the CD4 T-cell receptor repertoire by immunization with a complex antigen using short stretches of CDR3 protein sequence.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3181, doi. 10.1093/bioinformatics/btu523

By:

Thomas, Niclas;
Best, Katharine;
Cinelli, Mattia;
Reich-Zeliger, Shlomit;
Gal, Hilah;
Shifrut, Eric;
Madi, Asaf;
Friedman, Nir;
Shawe-Taylor, John;
Chain, Benny

Publication type:

Article

A method for de novo nucleic acid diagnostic target discovery.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3174, doi. 10.1093/bioinformatics/btu515

By:

Zhang, Yeting;
Sun, Yazhou

Publication type:

Article

Modeling genome coverage in single-cell sequencing.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3159, doi. 10.1093/bioinformatics/btu540

By:

Daley, Timothy;
Smith, Andrew D.

Publication type:

Article

MEGADOCK 4.0: an ultra–high-performance protein–protein docking software for heterogeneous supercomputers.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3281

By:

Matsuzaki, Yuri;
Ishida, Takashi;
Ohue, Masahito;
Shimoda, Takehiro;
Akiyama, Yutaka;
Suzuki, Shuji

Publication type:

Article

AliView: a fast and lightweight alignment viewer and editor for large datasets.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3276, doi. 10.1093/bioinformatics/btu531

By:

Larsson, Anders

Publication type:

Article

BitPAl: a bit-parallel, general integer-scoring sequence alignment algorithm.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3166, doi. 10.1093/bioinformatics/btu507

By:

Loving, Joshua;
Hernandez, Yozen;
Benson, Gary

Publication type:

Article

APPEX: analysis platform for the identification of prognostic gene expression signatures in cancer.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3284

By:

Yun, Seok-Joong;
Kim, Wun-Jae;
Kim, Seon-Kyu;
Hwan Kim, Jong;
Kim, Seon-Young

Publication type:

Article

BioTextQuest+: a knowledge integration platform for literature mining and concept discovery.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3249, doi. 10.1093/bioinformatics/btu524

By:

Papanikolaou, Nikolas;
Pavlopoulos, Georgios A.;
Pafilis, Evangelos;
Theodosiou, Theodosios;
Schneider, Reinhard;
Satagopam, Venkata P.;
Promponas, Vasilis J.;
Iliopoulos, Ioannis;
Ouzounis, Christos A.;
Eliopoulos, Aristides G.

Publication type:

Article

Basic4Cseq: an R/Bioconductor package for analyzing 4C-seq data.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3268, doi. 10.1093/bioinformatics/btu497

By:

Walter, Carolin;
Schuetzmann, Daniel;
Rosenbauer, Frank;
Dugas, Martin

Publication type:

Article

Thresher: an improved algorithm for peak height thresholding of microbial community profiles.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3257, doi. 10.1093/bioinformatics/btu528

By:

Starke, Verena;
Steele, Andrew

Publication type:

Article

Retro: concept-based clustering of biomedical topical sets.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3240, doi. 10.1093/bioinformatics/btu514

By:

Yeganova, Lana;
Kim, Won;
Kim, Sun;
Wilbur, W. John

Publication type:

Article

Greater power and computational efficiency for kernel-based association testing of sets of genetic variants.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3206, doi. 10.1093/bioinformatics/btu504

By:

Lippert, Christoph;
Xiang, Jing;
Horta, Danilo;
Widmer, Christian;
Kadie, Carl;
Heckerman, David;
Listgarten, Jennifer

Publication type:

Article

DNAApp: a mobile application for sequencing data analysis.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3270, doi. 10.1093/bioinformatics/btu525

By:

Nguyen, Phi-Vu;
Gan, Samuel Ken-En;
Verma, Chandra Shekhar

Publication type:

Article

gCUP: rapid GPU-based HIV-1 co-receptor usage prediction for next-generation sequencing.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3272, doi. 10.1093/bioinformatics/btu535

By:

Olejnik, Michael;
Steuwer, Michel;
Gorlatch, Sergei;
Heider, Dominik

Publication type:

Article

Fast construction of FM-index for long sequence reads.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3274

By:

Li, Heng

Publication type:

Article

Drug/Cell-line Browser: interactive canvas visualization of cancer drug/cell-line viability assay datasets.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3289, doi. 10.1093/bioinformatics/btu526

By:

Duan, Qiaonan;
Wang, Zichen;
Fernandez, Nicolas F.;
Rouillard, Andrew D.;
Tan, Christopher M.;
Benes, Cyril H.;
Ma'ayan, Avi

Publication type:

Article

Metabomxtr: an R package for mixture-model analysis of non-targeted metabolomics data.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3287, doi. 10.1093/bioinformatics/btu509

By:

Nodzenski, Michael;
Muehlbauer, Michael J.;
Reisetter, Anna C.;
Lowe, William L.;
Scholtens, Denise M.;
Bain, James R.

Publication type:

Article

img2net: automated network-based analysis of imaged phenotypes.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3291, doi. 10.1093/bioinformatics/btu503

By:

Breuer, David;
Nikoloski, Zoran

Publication type:

Article

Estimating biological elementary flux modes that decompose a flux distribution by the minimal branching property.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3232, doi. 10.1093/bioinformatics/btu529

By:

Chan, Siu Hung Joshua;
Solem, Christian;
Jensen, Peter Ruhdal;
Ji, Ping

Publication type:

Article

Bias correction for selecting the minimal-error classifier from many machine learning models.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3152

By:

Tang, Shaowu;
Liao, Serena G.;
Jia, Jia;
Oesterreich, Steffi;
Lin, Yan;
Ding, Ying;
Tseng, George C.

Publication type:

Article

Kotai Antibody Builder: automated high-resolution structural modeling of antibodies.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3279, doi. 10.1093/bioinformatics/btu510

By:

Yamashita, Kazuo;
Ikeda, Kazuyoshi;
Amada, Karlou;
Liang, Shide;
Tsuchiya, Yuko;
Nakamura, Haruki;
Shirai, Hiroki;
Standley, Daron M.

Publication type:

Article

Network-based analysis of genotype–phenotype correlations between different inheritance modes.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3223, doi. 10.1093/bioinformatics/btu482

By:

Hao, Dapeng;
Zhang, Shaojun;
Lu, Jianping;
Jiang, Yongshuai;
Wang, Shiyuan;
Zhou, Meng;
Li, Chuanxing

Publication type:

Article