Works matching IS 13674803 AND DT 2014 AND VI 30 AND IP 14

Results: 26

GAP: towards almost 100 percent prediction for β-strand-mediated aggregating peptides with distinct morphologies.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 1983, doi. 10.1093/bioinformatics/btu167

By:

Thangakani, A. Mary;
Kumar, Sandeep;
Nagarajan, R.;
Velmurugan, D.;
Gromiha, M. Michael

Publication type:

Article

kmacs: the k-Mismatch Average Common Substring Approach to alignment-free sequence comparison.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 1, doi. 10.1093/bioinformatics/btu331

By:

Leimeister, Chris-Andre;
Morgenstern, Burkhard

Publication type:

Article

The automated function prediction SIG looks back at 2013 and prepares for 2014.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2091, doi. 10.1093/bioinformatics/btu117

By:

Wass, Mark N.;
Mooney, Sean D.;
Linial, Michal;
Radivojac, Predrag;
Friedberg, Iddo

Publication type:

Article

Prediction of individualized therapeutic vulnerabilities in cancer from genomic profiles.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2051, doi. 10.1093/bioinformatics/btu164

By:

Aksoy, Bülent Arman;
Demir, Emek;
Babur, Özgün;
Wang, Weiqing;
Jing, Xiaohong;
Schultz, Nikolaus;
Sander, Chris

Publication type:

Article

Assessing multivariate gene-metabolome associations with rare variants using Bayesian reduced rank regression.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2026, doi. 10.1093/bioinformatics/btu140

By:

Marttinen, Pekka;
Pirinen, Matti;
Sarin, Antti-Pekka;
Gillberg, Jussi;
Kettunen, Johannes;
Surakka, Ida;
Kangas, Antti J.;
Soininen, Pasi;
O’Reilly, Paul;
Kaakinen, Marika;
Kähönen, Mika;
Lehtimäki, Terho;
Ala-Korpela, Mika;
Raitakari, Olli T.;
Salomaa, Veikko;
Järvelin, Marjo-Riitta;
Ripatti, Samuli;
Kaski, Samuel

Publication type:

Article

CorMut: an R/Bioconductor package for computing correlated mutations based on selection pressure.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2073

By:

Li, Zhenpeng;
Huang, Yang;
Ouyang, Yabo;
Jiao, Yang;
Xing, Hui;
Liao, Lingjie;
Jiang, Shibo;
Shao, Yiming;
Ma, Liying

Publication type:

Article

comTAR: a web tool for the prediction and characterization of conserved microRNA targets in plants.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2066, doi. 10.1093/bioinformatics/btu147

By:

Chorostecki, Uciel;
Palatnik, Javier F.

Publication type:

Article

Improving MEME via a two-tiered significance analysis.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 1965, doi. 10.1093/bioinformatics/btu163

By:

Tanaka, Emi;
Bailey, Timothy L.;
Keich, Uri

Publication type:

Article

KAnalyze: a fast versatile pipelined K-mer toolkit.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2070, doi. 10.1093/bioinformatics/btu152

By:

Audano, Peter;
Vannberg, Fredrik

Publication type:

Article

Prokka: rapid prokaryotic genome annotation.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2068, doi. 10.1093/bioinformatics/btu153

By:

Seemann, Torsten

Publication type:

Article

Piecewise-constant and low-rank approximation for identification of recurrent copy number variations.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 1943, doi. 10.1093/bioinformatics/btu131

By:

Zhou, Xiaowei;
Liu, Jiming;
Wan, Xiang;
Yu, Weichuan

Publication type:

Article

tqDist: a library for computing the quartet and triplet distances between binary or general trees.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2079, doi. 10.1093/bioinformatics/btu157

By:

Sand, Andreas;
Holt, Morten K.;
Johansen, Jens;
Brodal, Gerth Stølting;
Mailund, Thomas;
Pedersen, Christian N. S.

Publication type:

Article

Fast alignment-free sequence comparison using spaced-word frequencies.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 1991, doi. 10.1093/bioinformatics/btu177

By:

Leimeister, Chris-Andre;
Boden, Marcus;
Horwege, Sebastian;
Lindner, Sebastian;
Morgenstern, Burkhard

Publication type:

Article

Turtle: Identifying frequent k-mers with cache-efficient algorithms.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 1950, doi. 10.1093/bioinformatics/btu132

By:

Roy, Rajat Shuvro;
Bhattacharya, Debashish;
Schliep, Alexander

Publication type:

Article

flowFit: a Bioconductor package to estimate proliferation in cell-tracking dye studies.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2060, doi. 10.1093/bioinformatics/btu127

By:

Rambaldi, Davide;
Pece, Salvatore;
Di Fiore, Pier Paolo

Publication type:

Article

molBLOCKS: decomposing small molecule sets and uncovering enriched fragments.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2081, doi. 10.1093/bioinformatics/btu173

By:

Ghersi, Dario;
Singh, Mona

Publication type:

Article

SECA: SNP effect concordance analysis using genome-wide association summary results.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2086, doi. 10.1093/bioinformatics/btu171

By:

Nyholt, Dale R.

Publication type:

Article

Beyond the proteome: Mass Spectrometry Special Interest Group (MS-SIG) at ISMB/ECCB 2013.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2089

By:

Ryu, So Young;
Payne, Samuel H.;
Schaab, Christoph;
Xiao, Wenzhong

Publication type:

Article

A general method for accurate estimation of false discovery rates in identification of differentially expressed genes.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2018, doi. 10.1093/bioinformatics/btu124

By:

Tan, Yuan-De;
Xu, Hongyan

Publication type:

Article

Improved transcript isoform discovery using ORF graphs.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 1958, doi. 10.1093/bioinformatics/btu160

By:

Majoros, William H.;
Lebeck, Niel;
Ohler, Uwe;
Li, Song

Publication type:

Article

Motifs tree: a new method for predicting post-translational modifications.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 1974, doi. 10.1093/bioinformatics/btu165

By:

Charpilloz, Christophe;
Veuthey, Anne-Lise;
Chopard, Bastien;
Falcone, Jean-Luc

Publication type:

Article

Basin Hopping Graph: a computational framework to characterize RNA folding landscapes.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2009

By:

Kucharík, Marcel;
Hofacker, Ivo L.;
Stadler, Peter F.;
Qin, Jing

Publication type:

Article

TroX: a new method to learn about the genesis of aneuploidy from trisomic products of conception.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2035, doi. 10.1093/bioinformatics/btu159

By:

Kermany, Amir R.;
Segurel, Laure;
Oliver, Tiffany R.;
Przeworski, Molly

Publication type:

Article

VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2076, doi. 10.1093/bioinformatics/btu168

By:

Obenchain, Valerie;
Lawrence, Michael;
Carey, Vincent;
Gogarten, Stephanie;
Shannon, Paul;
Morgan, Martin

Publication type:

Article

massiR: a method for predicting the sex of samples in gene expression microarray datasets.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2084, doi. 10.1093/bioinformatics/btu161

By:

Buckberry, Sam;
Bent, Stephen J.;
Bianco-Miotto, Tina;
Roberts, Claire T.

Publication type:

Article

Optimal metabolic route search based on atom mappings.

Published in:

Bioinformatics, 2014, v. 30, n. 14, p. 2043, doi. 10.1093/bioinformatics/btu150

By:

Latendresse, Mario;
Krummenacker, Markus;
Karp, Peter D.

Publication type:

Article