Works matching IS 13674803 AND DT 2014 AND VI 30 AND IP 11

Results: 26

SurvMicro: assessment of miRNA-based prognostic signatures for cancer clinical outcomes by multivariate survival analysis.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1630, doi. 10.1093/bioinformatics/btu087

By:

Aguirre-Gamboa, Raul;
Trevino, Victor

Publication type:

Article

An efficient algorithm for accurate computation of the Dirichlet-multinomial log-likelihood function.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1547, doi. 10.1093/bioinformatics/btu079

By:

Yu, Peng;
Shaw, Chad A.

Publication type:

Article

AMASS: a database for investigating protein structures.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1595, doi. 10.1093/bioinformatics/btu073

By:

Mielke, Clinton J.;
Mandarino, Lawrence J.;
Dinu, Valentin

Publication type:

Article

Comparing DNA integration site clusters with scan statistics.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1493, doi. 10.1093/bioinformatics/btu035

By:

Berry, Charles C.;
Ocwieja, Karen E.;
Malani, Nirav;
Bushman, Frederic D.

Publication type:

Article

The 3DGD: a database of genome 3D structure.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1640, doi. 10.1093/bioinformatics/btu081

By:

Li, Chao;
Dong, Xiao;
Fan, Haiwei;
Wang, Chuan;
Ding, Guohui;
Li, Yixue

Publication type:

Article

ARTS: automated randomization of multiple traits for study design.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1637, doi. 10.1093/bioinformatics/btu075

By:

Maienschein-Cline, Mark;
Lei, Zhengdeng;
Gardeux, Vincent;
Abbasi, Taimur;
Machado, Roberto F.;
Gordeuk, Victor;
Desai, Ankit A.;
Saraf, Santosh;
Bahroos, Neil;
Lussier, Yves

Publication type:

Article

BIMA V3: an aligner customized for mate pair library sequencing.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1627, doi. 10.1093/bioinformatics/btu078

By:

Drucker, Travis M.;
Johnson, Sarah H.;
Murphy, Stephen J.;
Cradic, Kendall W.;
Therneau, Terry M.;
Vasmatzis, George

Publication type:

Article

Analysis of gene expression data using a linear mixed model/finite mixture model approach: application to regional differences in the human brain.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1555, doi. 10.1093/bioinformatics/btu088

By:

Trabzuni, Daniah;
Thomson, Peter C.

Publication type:

Article

Unraveling the outcome of 16S rDNA-based taxonomy analysis through mock data and simulations.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1530, doi. 10.1093/bioinformatics/btu085

By:

May, Ali;
Abeln, Sanne;
Crielaard, Wim;
Heringa, Jaap;
Brandt, Bernd W.

Publication type:

Article

Complete enumeration of elementary flux modes through scalable demand-based subnetwork definition.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1569, doi. 10.1093/bioinformatics/btu021

By:

Hunt, Kristopher A.;
Folsom, James P.;
Taffs, Reed L.;
Carlson, Ross P.

Publication type:

Article

Supercomputing for the parallelization of whole genome analysis.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1508, doi. 10.1093/bioinformatics/btu071

By:

Puckelwartz, Megan J.;
Pesce, Lorenzo L.;
Nelakuditi, Viswateja;
Dellefave-Castillo, Lisa;
Golbus, Jessica R.;
Day, Sharlene M.;
Cappola, Thomas P.;
Dorn, Gerald W.;
Foster, Ian T.;
McNally, Elizabeth M.

Publication type:

Article

SegAnnDB: interactive Web-based genomic segmentation.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1539, doi. 10.1093/bioinformatics/btu072

By:

Hocking, Toby D.;
Boeva, Valentina;
Rigaill, Guillem;
Schleiermacher, Gudrun;
Janoueix-Lerosey, Isabelle;
Delattre, Olivier;
Richer, Wilfrid;
Bourdeaut, Franck;
Suguro, Miyuki;
Seto, Masao;
Bach, Francis;
Vert, Jean-Philippe

Publication type:

Article

HiBrowse: multi-purpose statistical analysis of genome-wide chromatin 3D organization.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1620, doi. 10.1093/bioinformatics/btu082

By:

Paulsen, Jonas;
Sandve, Geir Kjetil;
Gundersen, Sveinung;
Lien, Tonje G.;
Trengereid, Kai;
Hovig, Eivind

Publication type:

Article

LPmerge: an R package for merging genetic maps by linear programming.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1623, doi. 10.1093/bioinformatics/btu091

By:

Endelman, Jeffrey B.;
Plomion, Christophe

Publication type:

Article

HUM calculator and HUM package for R: easy-to-use software tools for multicategory receiver operating characteristic analysis.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1635, doi. 10.1093/bioinformatics/btu086

By:

Novoselova, Natalia;
Della Beffa, Cristina;
Wang, Junxi;
Li, Jialiang;
Pessler, Frank;
Klawonn, Frank

Publication type:

Article

Event trigger identification for biomedical events extraction using domain knowledge.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1587, doi. 10.1093/bioinformatics/btu061

By:

Zhou, Deyu;
Zhong, Dayou;
He, Yulan

Publication type:

Article

Integrative gene set analysis of multi-platform data with sample heterogeneity.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1501, doi. 10.1093/bioinformatics/btu060

By:

Hu, Jun;
Tzeng, Jung-Ying

Publication type:

Article

Visualization and probability-based scoring of structural variants within repetitive sequences.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1514, doi. 10.1093/bioinformatics/btu054

By:

Halper-Stromberg, Eitan;
Steranka, Jared;
Burns, Kathleen H.;
Sabunciyan, Sarven;
Irizarry, Rafael A.

Publication type:

Article

StochHMM: a flexible hidden Markov model tool and C++ library.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1625, doi. 10.1093/bioinformatics/btu057

By:

Lott, Paul C.;
Korf, Ian

Publication type:

Article

The cleverSuite approach for protein characterization: predictions of structural properties, solubility, chaperone requirements and RNA-binding abilities.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1601, doi. 10.1093/bioinformatics/btu074

By:

Klus, Petr;
Bolognesi, Benedetta;
Agostini, Federico;
Marchese, Domenica;
Zanzoni, Andreas;
Tartaglia, Gian Gaetano

Publication type:

Article

iNuc-PseKNC: a sequence-based predictor for predicting nucleosome positioning in genomes with pseudo k-tuple nucleotide composition.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1522, doi. 10.1093/bioinformatics/btu083

By:

Guo, Shou-Hui;
Deng, En-Ze;
Xu, Li-Qin;
Ding, Hui;
Lin, Hao;
Chen, Wei;
Chou, Kuo-Chen

Publication type:

Article

Learning phenotype densities conditional on many interacting predictors.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1562, doi. 10.1093/bioinformatics/btu040

By:

Kessler, David C.;
Taylor, Jack A.;
Dunson, David B.

Publication type:

Article

Identifying critical transitions of complex diseases based on a single sample.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1579, doi. 10.1093/bioinformatics/btu084

By:

Liu, Rui;
Yu, Xiangtian;
Liu, Xiaoping;
Xu, Dong;
Aihara, Kazuyuki;
Chen, Luonan

Publication type:

Article

CoNtRol: an open source framework for the analysis of chemical reaction networks.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1633, doi. 10.1093/bioinformatics/btu063

By:

Donnell, Pete;
Banaji, Murad;
Marginean, Anca;
Pantea, Casian

Publication type:

Article

bwtool: a tool for bigWig files.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1618, doi. 10.1093/bioinformatics/btu056

By:

Pohl, Andy;
Beato, Miguel

Publication type:

Article

A benchmark for comparison of cell tracking algorithms.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1609, doi. 10.1093/bioinformatics/btu080

By:

Maška, Martin;
Ulman, Vladimír;
Svoboda, David;
Matula, Pavel;
Matula, Petr;
Ederra, Cristina;
Urbiola, Ainhoa;
España, Tomás;
Venkatesan, Subramanian;
Balak, Deepak M.W.;
Karas, Pavel;
Bolcková, Tereza;
Štreitová, Markéta;
Carthel, Craig;
Coraluppi, Stefano;
Harder, Nathalie;
Rohr, Karl;
Magnusson, Klas E. G.;
Jaldén, Joakim;
Blau, Helen M.

Publication type:

Article