Works matching IS 13674803 AND DT 2014 AND VI 30 AND IP 10

Results: 28

Bayesian joint analysis of heterogeneous genomics data.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1370, doi. 10.1093/bioinformatics/btu064

By:

Ray, Priyadip;
Zheng, Lingling;
Lucas, Joseph;
Carin, Lawrence

Publication type:

Article

Adaption of the global test idea to proteomics data with missing values.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1424, doi. 10.1093/bioinformatics/btu062

By:

Jung, Klaus;
Dihazi, Hassan;
Bibi, Asima;
Dihazi, Gry H.;
Beißbarth, Tim

Publication type:

Article

Mobyle SNAP Workbench: a web-based analysis portal for population genetics and evolutionary genomics.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1488, doi. 10.1093/bioinformatics/btu055

By:

Monacell, James T.;
Carbone, Ignazio

Publication type:

Article

Comparison of approaches for parameter identifiability analysis of biological systems.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1440, doi. 10.1093/bioinformatics/btu006

By:

Raue, Andreas;
Karlsson, Johan;
Saccomani, Maria Pia;
Jirstrand, Mats;
Timmer, Jens

Publication type:

Article

Composition of seed sequence is a major determinant of microRNA targeting patterns.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1377, doi. 10.1093/bioinformatics/btu045

By:

Wang, Xiaowei

Publication type:

Article

CAFE: an R package for the detection of gross chromosomal abnormalities from gene expression microarray data.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1484, doi. 10.1093/bioinformatics/btu028

By:

Bollen, Sander;
Leddin, Mathias;
Andrade-Navarro, Miguel A.;
Mah, Nancy

Publication type:

Article

Reference-free cell mixture adjustments in analysis of DNA methylation data.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1431, doi. 10.1093/bioinformatics/btu029

By:

Houseman, Eugene Andres;
Molitor, John;
Marsit, Carmen J.

Publication type:

Article

G-BLASTN: accelerating nucleotide alignment by graphics processors.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1384, doi. 10.1093/bioinformatics/btu047

By:

Zhao, Kaiyong;
Chu, Xiaowen

Publication type:

Article

Modeling tissue contamination to improve molecular identification of the primary tumor site of metastases.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1417, doi. 10.1093/bioinformatics/btu044

By:

Vincent, Martin;
Perell, Katharina;
Nielsen, Finn Cilius;
Daugaard, Gedske;
Hansen, Niels Richard

Publication type:

Article

Parseq: reconstruction of microbial transcription landscape from RNA-Seq read counts using state-space models.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1409, doi. 10.1093/bioinformatics/btu042

By:

Mirauta, Bogdan;
Nicolas, Pierre;
Richard, Hugues

Publication type:

Article

ChEpiMod: a knowledgebase for chemical modulators of epigenome reader domains.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1481, doi. 10.1093/bioinformatics/btu052

By:

Meslamani, Jamel;
Smith, Steven G.;
Sanchez, Roberto;
Zhou, Ming-Ming

Publication type:

Article

PUmPER: phylogenies updated perpetually.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1476, doi. 10.1093/bioinformatics/btu053

By:

Izquierdo-Carrasco, Fernando;
Cazes, John;
Smith, Stephen A.;
Stamatakis, Alexandros

Publication type:

Article

Combinatorial therapy discovery using mixed integer linear programming.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1456, doi. 10.1093/bioinformatics/btu046

By:

Pang, Kaifang;
Wan, Ying-Wooi;
Choi, William T.;
Donehower, Lawrence A.;
Sun, Jingchun;
Pant, Dhruv;
Liu, Zhandong

Publication type:

Article

h5vc: scalable nucleotide tallies with HDF5.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1464, doi. 10.1093/bioinformatics/btu026

By:

Pyl, Paul Theodor;
Gehring, Julian;
Fischer, Bernd;
Huber, Wolfgang

Publication type:

Article

Bio Simulators: a web UI for biological simulation.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1491, doi. 10.1093/bioinformatics/btu050

By:

Pedersen, Michael;
Oury, Nicolas;
Gravill, Colin;
Phillips, Andrew

Publication type:

Article

Algorithms and tools for protein–protein interaction networks clustering, with a special focus on population-based stochastic methods.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1343, doi. 10.1093/bioinformatics/btu034

By:

Pizzuti, Clara;
Rombo, Simona E.

Publication type:

Article

IQRray, a new method for Affymetrix microarray quality control, and the homologous organ conservation score, a new benchmark method for quality control metrics.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1392, doi. 10.1093/bioinformatics/btu027

By:

Rosikiewicz, Marta;
Robinson-Rechavi, Marc

Publication type:

Article

Network orientation via shortest paths.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1449, doi. 10.1093/bioinformatics/btu043

By:

Silverbush, Dana;
Sharan, Roded

Publication type:

Article

MEMBPLUGIN: studying membrane complexity in VMD.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1478

By:

Guixà-González, Ramon;
Rodriguez-Espigares, Ismael;
Ramírez-Anguita, Juan Manuel;
Carrió-Gaspar, Pau;
Martinez-Seara, Hector;
Giorgino, Toni;
Selent, Jana

Publication type:

Article

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1363, doi. 10.1093/bioinformatics/btu049

By:

Aryee, Martin J.;
Jaffe, Andrew E.;
Corrada-Bravo, Hector;
Ladd-Acosta, Christine;
Feinberg, Andrew P.;
Hansen, Kasper D.;
Irizarry, Rafael A.

Publication type:

Article

BLESS: Bloom filter-based error correction solution for high-throughput sequencing reads.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1354, doi. 10.1093/bioinformatics/btu030

By:

Heo, Yun;
Wu, Xiao-Long;
Chen, Deming;
Ma, Jian;
Hwu, Wen-Mei

Publication type:

Article

PGP: parallel prokaryotic proteogenomics pipeline for MPI clusters, high-throughput batch clusters and multicore workstations.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1469, doi. 10.1093/bioinformatics/btu051

By:

Tovchigrechko, Andrey;
Venepally, Pratap;
Payne, Samuel H.

Publication type:

Article

ECplot: an online tool for making standardized plots from large datasets for bioinformatics publications.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1467, doi. 10.1093/bioinformatics/btu038

By:

Fok, Alex Chun-Hong;
Mok, Sunny Siu-Nam;
Lee, Sau Dan;
Yip, Kevin Y.

Publication type:

Article

NGSANE: a lightweight production informatics framework for high-throughput data analysis.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1471, doi. 10.1093/bioinformatics/btu036

By:

Buske, Fabian A.;
French, Hugh J.;
Smith, Martin A.;
Clark, Susan J.;
Bauer, Denis C.

Publication type:

Article

The most informative spacing test effectively discovers biologically relevant outliers or multiple modes in expression.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1400, doi. 10.1093/bioinformatics/btu039

By:

Pawlikowska, Iwona;
Wu, Gang;
Edmonson, Michael;
Liu, Zhifa;
Gruber, Tanja;
Zhang, Jinghui;
Pounds, Stan

Publication type:

Article

Cas-OFFinder: a fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1473, doi. 10.1093/bioinformatics/btu048

By:

Bae, Sangsu;
Park, Jeongbin;
Kim, Jin-Soo

Publication type:

Article

A new era in bioimage informatics.

Published in:

2014

By:

Murphy, Robert F.

Publication type:

Editorial

ngsTools: methods for population genetics analyses from next-generation sequencing data.

Published in:

Bioinformatics, 2014, v. 30, n. 10, p. 1486, doi. 10.1093/bioinformatics/btu041

By:

Fumagalli, Matteo;
Vieira, Filipe G.;
Linderoth, Tyler;
Nielsen, Rasmus

Publication type:

Article