Works matching IS 13674803 AND DT 2014 AND VI 30 AND IP 1

Results: 30

ISCB: past–present perspective for the International Society for Computational Biology.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 143, doi. 10.1093/bioinformatics/btt669

By:

Rost, Burkhard

Publication type:

Article

SeqPig: simple and scalable scripting for large sequencing data sets in Hadoop.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 119, doi. 10.1093/bioinformatics/btt601

By:

Schumacher, André;
Pireddu, Luca;
Niemenmaa, Matti;
Kallio, Aleksi;
Korpelainen, Eija;
Zanetti, Gianluigi;
Heljanko, Keijo

Publication type:

Article

A user-oriented web crawler for selectively acquiring online content in e-health research.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 104, doi. 10.1093/bioinformatics/btt571

By:

Xu, Songhua;
Yoon, Hong-Jun;
Tourassi, Georgia

Publication type:

Article

AnchorMS: a bioinformatics tool to derive structural information from the mass spectra of cross-linked protein complexes.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 125, doi. 10.1093/bioinformatics/btt617

By:

Mayne, Shannon L.N.;
Patterton, Hugh-G.

Publication type:

Article

Phylowood: interactive web-based animations of biogeographic and phylogeographic histories.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 123, doi. 10.1093/bioinformatics/btt635

By:

Landis, Michael J.;
Bedford, Trevor

Publication type:

Article

MSPrep—Summarization, normalization and diagnostics for processing of mass spectrometry–based metabolomic data.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 133, doi. 10.1093/bioinformatics/btt589

By:

Hughes, Grant;
Cruickshank-Quinn, Charmion;
Reisdorph, Richard;
Lutz, Sharon;
Petrache, Irina;
Reisdorph, Nichole;
Bowler, Russell;
Kechris, Katerina

Publication type:

Article

Using Genome Query Language to uncover genetic variation.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 1, doi. 10.1093/bioinformatics/btt250

By:

Kozanitis, Christos;
Heiberg, Andrew;
Varghese, George;
Bafna, Vineet

Publication type:

Article

Cascleave 2.0, a new approach for predicting caspase and granzyme cleavage targets.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 71, doi. 10.1093/bioinformatics/btt603

By:

Wang, Mingjun;
Zhao, Xing-Ming;
Tan, Hao;
Akutsu, Tatsuya;
Whisstock, James C.;
Song, Jiangning

Publication type:

Article

Further Steps in TANGO: improved taxonomic assignment in metagenomics.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 17, doi. 10.1093/bioinformatics/btt256

By:

Alonso-Alemany, Daniel;
Barré, Aurélien;
Beretta, Stefano;
Bonizzoni, Paola;
Nikolski, Macha;
Valiente, Gabriel

Publication type:

Article

gCMAP: user-friendly connectivity mapping with R.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 127, doi. 10.1093/bioinformatics/btt592

By:

Sandmann, Thomas;
Kummerfeld, Sarah K.;
Gentleman, Robert;
Bourgon, Richard

Publication type:

Article

Functional module identification in protein interaction networks by interaction patterns.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 81, doi. 10.1093/bioinformatics/btt569

By:

Wang, Yijie;
Qian, Xiaoning

Publication type:

Article

Specificity control for read alignments using an artificial reference genome-guided false discovery rate.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 9, doi. 10.1093/bioinformatics/btt255

By:

Giese, Sven H.;
Zickmann, Franziska;
Renard, Bernhard Y.

Publication type:

Article

MFCompress: a compression tool for FASTA and multi-FASTA data.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 117, doi. 10.1093/bioinformatics/btt594

By:

Pinho, Armando J.;
Pratas, Diogo

Publication type:

Article

Pattern search in BioPAX models.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 139, doi. 10.1093/bioinformatics/btt539

By:

Babur, Özgün;
Aksoy, Bülent Arman;
Rodchenkov, Igor;
Sümer, Selçuk Onur;
Sander, Chris;
Demir, Emek

Publication type:

Article

EXPANDS: expanding ploidy and allele frequency on nested subpopulations.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 50, doi. 10.1093/bioinformatics/btt622

By:

Andor, Noemi;
Harness, Julie V.;
Müller, Sabine;
Mewes, Hans W.;
Petritsch, Claudia

Publication type:

Article

De novo finished 2.8 Mbp Staphylococcus aureus genome assembly from 100 bp short and long range paired-end reads.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 40, doi. 10.1093/bioinformatics/btt590

By:

Hernandez, David;
Tewhey, Ryan;
Veyrieras, Jean-Baptiste;
Farinelli, Laurent;
Østerås, Magne;
François, Patrice;
Schrenzel, Jacques

Publication type:

Article

A C library for retrieving specific reactions from the BioModels database.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 129, doi. 10.1093/bioinformatics/btt567

By:

Neal, M. L.;
Galdzicki, M.;
Gallimore, J. T.;
Sauro, H. M.

Publication type:

Article

Sequence alignment visualization in HTML5 without Java.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 121, doi. 10.1093/bioinformatics/btt614

By:

Gille, Christoph;
Birgit, Weyand;
Gille, Andreas

Publication type:

Article

The International Society of Computational Biology presents: the Great Lakes Bioinformatics Conference, May 16–18, 2014, Cincinnati, Ohio.

Published in:

2014

By:

Cavalcoli, Jim;
Welch, Lonnie;
Aronow, Bruce;
Draghici, Sorin;
Kihara, Daisuke

Publication type:

Proceeding

ISCB/SPRINGER series in computational biology.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 146, doi. 10.1093/bioinformatics/btt670

By:

Dress, Andreas;
Linial, Michal;
Troyanskaya, Olga;
Vingron, Martin

Publication type:

Article

BooleSim: an interactive Boolean network simulator.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 131, doi. 10.1093/bioinformatics/btt568

By:

Bock, Matthias;
Scharp, Till;
Talnikar, Chaitanya;
Klipp, Edda

Publication type:

Article

Adaptive reference-free compression of sequence quality scores.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 24, doi. 10.1093/bioinformatics/btt257

By:

Janin, Lilian;
Rosone, Giovanna;
Cox, Anthony J.

Publication type:

Article

PhosphoNetworks: a database for human phosphorylation networks.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 141

By:

Hu, Jianfei;
Rho, Hee-Sool;
Newman, Robert H.;
Zhang, Jin;
Zhu, Heng;
Qian, Jiang

Publication type:

Article

StochDecomp—Matlab package for noise decomposition in stochastic biochemical systems.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 137, doi. 10.1093/bioinformatics/btt631

By:

Jetka, Tomasz;
Charzyńska, Agata;
Gambin, Anna;
Stumpf, Michael P.H.;
Komorowski, Michał

Publication type:

Article

A poor man’s BLASTX—high-throughput metagenomic protein database search using PAUDA.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 38, doi. 10.1093/bioinformatics/btt254

By:

Huson, Daniel H.;
Xie, Chao

Publication type:

Article

snoStrip: a snoRNA annotation pipeline.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 115, doi. 10.1093/bioinformatics/btt604

By:

Bartschat, Sebastian;
Kehr, Stephanie;
Tafer, Hakim;
Stadler, Peter F.;
Hertel, Jana

Publication type:

Article

Inferring the soybean (Glycine max) microRNA functional network based on target gene network.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 94, doi. 10.1093/bioinformatics/btt605

By:

Xu, Yungang;
Guo, Maozu;
Liu, Xiaoyan;
Wang, Chunyu;
Liu, Yang

Publication type:

Article

BEReX: Biomedical Entity-Relationship eXplorer.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 135, doi. 10.1093/bioinformatics/btt598

By:

Jeon, Minji;
Lee, Sunwon;
Lee, Kyubum;
Tan, Aik-Choon;
Kang, Jaewoo

Publication type:

Article

Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 61, doi. 10.1093/bioinformatics/btt597

By:

Milreu, Paulo Vieira;
Klein, Cecilia Coimbra;
Cottret, Ludovic;
Acuña, Vicente;
Birmelé, Etienne;
Borassi, Michele;
Junot, Christophe;
Marchetti-Spaccamela, Alberto;
Marino, Andrea;
Stougie, Leen;
Jourdan, Fabien;
Crescenzi, Pierluigi;
Lacroix, Vincent;
Sagot, Marie-France

Publication type:

Article

Informed and automated k-mer size selection for genome assembly.

Published in:

Bioinformatics, 2014, v. 30, n. 1, p. 31, doi. 10.1093/bioinformatics/btt310

By:

Chikhi, Rayan;
Medvedev, Paul

Publication type:

Article