Works matching IS 13674803 AND DT 2013 AND VI 29 AND IP 17

Results: 26

Charge asymmetry in the proteins of the outer membrane.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2122, doi. 10.1093/bioinformatics/btt355

By:

Slusky, Joanna S. G.;
Dunbrack, Roland L.

Publication type:

Article

Linc2GO: a human LincRNA function annotation resource based on ceRNA hypothesis.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2221, doi. 10.1093/bioinformatics/btt361

By:

Liu, Ke;
Yan, Zhangming;
Li, Yuchao;
Sun, Zhirong

Publication type:

Article

Joint analysis of expression profiles from multiple cancers improves the identification of microRNA–gene interactions.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2137, doi. 10.1093/bioinformatics/btt341

By:

Chen, Xiaowei;
Slack, Frank J.;
Zhao, Hongyu

Publication type:

Article

The human genome contracts again.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2199, doi. 10.1093/bioinformatics/btt362

By:

Pavlichin, Dmitri S.;
Weissman, Tsachy;
Yona, Golan

Publication type:

Article

CellMix: a comprehensive toolbox for gene expression deconvolution.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2211, doi. 10.1093/bioinformatics/btt351

By:

Gaujoux, Renaud;
Seoighe, Cathal

Publication type:

Article

Optimizing multiple sequence alignments using a genetic algorithm based on three objectives: structural information, non-gaps percentage and totally conserved columns.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2112

By:

Ortuño, Francisco M.;
Valenzuela, Olga;
Rojas, Fernando;
Pomares, Hector;
Florido, Javier P.;
Urquiza, Jose M.;
Rojas, Ignacio

Publication type:

Article

Mechanistic insights into mutually exclusive splicing in dynamin 1.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2084, doi. 10.1093/bioinformatics/btt368

By:

Suyama, Mikita

Publication type:

Article

Differential gene expression analysis using coexpression and RNA-Seq data.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2153, doi. 10.1093/bioinformatics/btt363

By:

Yang, Ei-Wen;
Girke, Thomas;
Jiang, Tao

Publication type:

Article

Co-regulation in embryonic stem cells via context-dependent binding of transcription factors.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2162, doi. 10.1093/bioinformatics/btt365

By:

Lee, Yuju;
Zhou, Qing

Publication type:

Article

Flux balance impact degree: a new definition of impact degree to properly treat reversible reactions in metabolic networks.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2178, doi. 10.1093/bioinformatics/btt364

By:

Zhao, Yang;
Tamura, Takeyuki;
Akutsu, Tatsuya;
Vert, Jean-Philippe

Publication type:

Article

A genomic random interval model for statistical analysis of genomic lesion data.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2088, doi. 10.1093/bioinformatics/btt372

By:

Pounds, Stan;
Cheng, Cheng;
Li, Shaoyu;
Liu, Zhifa;
Zhang, Jinghui;
Mullighan, Charles

Publication type:

Article

A Sensitive and Accurate protein domain cLassification Tool (SALT) for short reads.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2103, doi. 10.1093/bioinformatics/btt357

By:

Zhang, Yuan;
Sun, Yanni;
Cole, James R.

Publication type:

Article

Pipit: visualizing functional impacts of structural variations.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2206, doi. 10.1093/bioinformatics/btt367

By:

Sakai, Ryo;
Moisse, Matthieu;
Reumers, Joke;
Aerts, Jan

Publication type:

Article

Data-based filtering for replicated high-throughput transcriptome sequencing experiments.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2146, doi. 10.1093/bioinformatics/btt350

By:

Rau, Andrea;
Gallopin, Mélina;
Celeux, Gilles;
Jaffrézic, Florence

Publication type:

Article

GRN2SBML: automated encoding and annotation of inferred gene regulatory networks complying with SBML.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2216, doi. 10.1093/bioinformatics/btt370

By:

Vlaic, Sebastian;
Hoffmann, Bianca;
Kupfer, Peter;
Weber, Michael;
Dräger, Andreas

Publication type:

Article

Metingear: a development environment for annotating genome-scale metabolic models.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2213, doi. 10.1093/bioinformatics/btt342

By:

May, John W.;
James, A. Gordon;
Steinbeck, Christoph

Publication type:

Article

Harnessing virtual machines to simplify next-generation DNA sequencing analysis.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2075, doi. 10.1093/bioinformatics/btt352

By:

Nocq, Julie;
Celton, Magalie;
Gendron, Patrick;
Lemieux, Sebastien;
Wilhelm, Brian T.

Publication type:

Article

Quikr: a method for rapid reconstruction of bacterial communities via compressive sensing.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2096, doi. 10.1093/bioinformatics/btt336

By:

Koslicki, David;
Foucart, Simon;
Rosen, Gail

Publication type:

Article

Cake: a bioinformatics pipeline for the integrated analysis of somatic variants in cancer genomes.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2208, doi. 10.1093/bioinformatics/btt371

By:

Rashid, Mamunur;
Robles-Espinoza, Carla Daniela;
Rust, Alistair G.;
Adams, David J.

Publication type:

Article

ChroMoS: an integrated web tool for SNP classification, prioritization and functional interpretation.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2197, doi. 10.1093/bioinformatics/btt356

By:

Barenboim, Maxim;
Manke, Thomas

Publication type:

Article

GPViz: dynamic visualization of genomic regions and variants affecting protein domains.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2195, doi. 10.1093/bioinformatics/btt354

By:

Snajder, Rene;
Trajanoski, Zlatko;
Hackl, Hubert

Publication type:

Article

SbacHTS: Spatial background noise correction for High-Throughput RNAi Screening.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2218, doi. 10.1093/bioinformatics/btt358

By:

Zhong, Rui;
Kim, Min Soo;
White, Michael A.;
Xie, Yang;
Xiao, Guanghua

Publication type:

Article

Topologically inferring risk-active pathways toward precise cancer classification by directed random walk.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2169, doi. 10.1093/bioinformatics/btt373

By:

Liu, Wei;
Li, Chunquan;
Xu, Yanjun;
Yang, Haixiu;
Yao, Qianlan;
Han, Junwei;
Shang, Desi;
Zhang, Chunlong;
Su, Fei;
Li, Xiaoxi;
Xiao, Yun;
Zhang, Fan;
Dai, Meng;
Li, Xia

Publication type:

Article

cisExpress: motif detection in DNA sequences.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2203, doi. 10.1093/bioinformatics/btt366

By:

Triska, Martin;
Grocutt, David;
Southern, James;
Murphy, Denis J.;
Tatarinova, Tatiana

Publication type:

Article

Towards building a disease-phenotype knowledge base: extracting disease-manifestation relationship from literature.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2186

By:

Xu, Rong;
Li, Li;
Wang, QuanQiu

Publication type:

Article

A new framework for computational protein design through cost function network optimization.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2129, doi. 10.1093/bioinformatics/btt374

By:

Traoré, Seydou;
Allouche, David;
André, Isabelle;
de Givry, Simon;
Katsirelos, George;
Schiex, Thomas;
Barbe, Sophie

Publication type:

Article