Works matching IS 13674803 AND DT 2013 AND VI 29 AND IP 14

Results: 29

A method for finding consensus breakpoints in the cancer genome from copy number data.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1793, doi. 10.1093/bioinformatics/btt300

By:

Toloşi, Laura;
Theißen, Jessica;
Halachev, Konstantin;
Hero, Barbara;
Berthold, Frank;
Lengauer, Thomas

Publication type:

Article

AuthorReward: increasing community curation in biological knowledge wikis through automated authorship quantification.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1837, doi. 10.1093/bioinformatics/btt284

By:

Dai, Lin;
Tian, Ming;
Wu, Jiayan;
Xiao, Jingfa;
Wang, Xumin;
Townsend, Jeffrey P.;
Zhang, Zhang

Publication type:

Article

ChemMapper: a versatile web server for exploring pharmacology and chemical structure association based on molecular 3D similarity method.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1827, doi. 10.1093/bioinformatics/btt270

By:

Gong, Jiayu;
Cai, Chaoqian;
Liu, Xiaofeng;
Ku, Xin;
Jiang, Hualiang;
Gao, Daqi;
Li, Honglin

Publication type:

Article

TiPs: a database of therapeutic targets in pathogens and associated tools.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1821, doi. 10.1093/bioinformatics/btt289

By:

Lepore, Rosalba;
Tramontano, Anna;
Via, Allegra

Publication type:

Article

REDItools: high-throughput RNA editing detection made easy.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1813, doi. 10.1093/bioinformatics/btt287

By:

Picardi, Ernesto;
Pesole, Graziano

Publication type:

Article

GAGE-B: an evaluation of genome assemblers for bacterial organisms.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1718, doi. 10.1093/bioinformatics/btt273

By:

Magoc, Tanja;
Pabinger, Stephan;
Canzar, Stefan;
Liu, Xinyue;
Su, Qi;
Puiu, Daniela;
Tallon, Luke J.;
Salzberg, Steven L.

Publication type:

Article

Pathview: an R/Bioconductor package for pathway-based data integration and visualization.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1830, doi. 10.1093/bioinformatics/btt285

By:

Luo, Weijun;
Brouwer, Cory

Publication type:

Article

InterEvScore: a novel coarse-grained interface scoring function using a multi-body statistical potential coupled to evolution.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1742, doi. 10.1093/bioinformatics/btt260

By:

Andreani, Jessica;
Faure, Guilhem;
Guerois, Raphael

Publication type:

Article

TrioVis: a visualization approach for filtering genomic variants of parent–child trios.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1801, doi. 10.1093/bioinformatics/btt267

By:

Sakai, Ryo;
Sifrim, Alejandro;
Vande Moere, Andrew;
Aerts, Jan

Publication type:

Article

CMAP: Complement Map Database.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1832, doi. 10.1093/bioinformatics/btt269

By:

Yang, Kun;
Dinasarapu, Ashok R.;
Reis, Edimara S.;
DeAngelis, Robert A.;
Ricklin, Daniel;
Subramaniam, Shankar;
Lambris, John D.

Publication type:

Article

opm: an R package for analysing OmniLog® phenotype microarray data.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1823, doi. 10.1093/bioinformatics/btt291

By:

Vaas, Lea A. I.;
Sikorski, Johannes;
Hofner, Benjamin;
Fiebig, Anne;
Buddruhs, Nora;
Klenk, Hans-Peter;
Göker, Markus

Publication type:

Article

ShereKhan—calculating exchange parameters in relaxation dispersion data from CPMG experiments.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1819, doi. 10.1093/bioinformatics/btt286

By:

Mazur, Adam;
Hammesfahr, Björn;
Griesinger, Christian;
Lee, Donghan;
Kollmar, Martin

Publication type:

Article

ACCUSA2: multi-purpose SNV calling enhanced by probabilistic integration of quality scores.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1809, doi. 10.1093/bioinformatics/btt268

By:

Piechotta, Michael;
Dieterich, Christoph

Publication type:

Article

Tasuke: a web-based visualization program for large-scale resequencing data.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1806, doi. 10.1093/bioinformatics/btt295

By:

Kumagai, Masahiko;
Kim, Jungsok;
Itoh, Ryutaro;
Itoh, Takeshi

Publication type:

Article

PconsC: combination of direct information methods and alignments improves contact prediction.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1815, doi. 10.1093/bioinformatics/btt259

By:

Skwark, Marcin J.;
Abdel-Rehim, Abbi;
Elofsson, Arne

Publication type:

Article

A combinatorial approach to the peptide feature matching problem for label-free quantification.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1768, doi. 10.1093/bioinformatics/btt274

By:

Lin, Hao;
He, Lin;
Ma, Bin

Publication type:

Article

Pathway Processor 2.0: a web resource for pathway-based analysis of high-throughput data.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1825, doi. 10.1093/bioinformatics/btt292

By:

Beltrame, Luca;
Bianco, Luca;
Fontana, Paolo;
Cavalieri, Duccio

Publication type:

Article

Identification of hidden relationships from the coupling of Hydrophobic Cluster Analysis and Domain Architecture information.

Published in:

2013

By:

Faure, Guilhem;
Callebaut, Isabelle

Publication type:

Back Cover

Alternative polyadenylation sites reveal distinct chromatin accessibility and histone modification in human cell lines.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1713, doi. 10.1093/bioinformatics/btt288

By:

Lee, Che-yu;
Chen, Liang

Publication type:

Article

Differential network analysis for the identification of condition-specific pathway activity and regulation.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1776, doi. 10.1093/bioinformatics/btt290

By:

Gambardella, Gennaro;
Moretti, Maria Nicoletta;
de Cegli, Rossella;
Cardone, Luca;
Peron, Adriano;
di Bernardo, Diego

Publication type:

Article

DrugMap Central: an on-line query and visualization tool to facilitate drug repositioning studies.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1834

By:

Fu, Changhe;
Jin, Guangxu;
Gao, Junfeng;
Zhu, Rui;
Ballesteros-villagrana, Efren;
Wong, Stephen T. C.

Publication type:

Article

COPRED: prediction of fold, GO molecular function and functional residues at the domain level.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1811, doi. 10.1093/bioinformatics/btt283

By:

López, Daniel;
Pazos, Florencio

Publication type:

Article

CAPITO—a web server-based analysis and plotting tool for circular dichroism data.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1750, doi. 10.1093/bioinformatics/btt278

By:

Wiedemann, Christoph;
Bellstedt, Peter;
Görlach, Matthias

Publication type:

Article

ReviSTER: an automated pipeline to revise misaligned reads to simple tandem repeats.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1734, doi. 10.1093/bioinformatics/btt277

By:

Tae, Hongseok;
McMahon, Kevin W.;
Settlage, Robert E.;
Bavarva, Jasmin H.;
Garner, Harold R.

Publication type:

Article

PconsD: ultra rapid, accurate model quality assessment for protein structure prediction.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1817, doi. 10.1093/bioinformatics/btt272

By:

Skwark, Marcin J.;
Elofsson, Arne

Publication type:

Article

Intervention in gene regulatory networks with maximal phenotype alteration.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1758, doi. 10.1093/bioinformatics/btt242

By:

Yousefi, Mohammadmahdi R.;
Dougherty, Edward R.

Publication type:

Article

MetPP: a computational platform for comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry-based metabolomics.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1786, doi. 10.1093/bioinformatics/btt275

By:

Wei, Xiaoli;
Shi, Xue;
Koo, Imhoi;
Kim, Seongho;
Schmidt, Robin H.;
Arteel, Gavin E.;
Watson, Walter H.;
McClain, Craig;
Zhang, Xiang

Publication type:

Article

MASS: meta-analysis of score statistics for sequencing studies.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1803, doi. 10.1093/bioinformatics/btt280

By:

Tang, Zheng-Zheng;
Lin, Dan-Yu

Publication type:

Article

TANGO: a generic tool for high-throughput 3D image analysis for studying nuclear organization.

Published in:

Bioinformatics, 2013, v. 29, n. 14, p. 1840, doi. 10.1093/bioinformatics/btt276

By:

Ollion, Jean;
Cochennec, Julien;
Loll, François;
Escudé, Christophe;
Boudier, Thomas

Publication type:

Article