Works matching IS 13674803 AND DT 2013 AND VI 29 AND IP 12

Results: 20

UPDtool: a tool for detection of iso- and heterodisomy in parent–child trios using SNP microarrays.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1562, doi. 10.1093/bioinformatics/btt174

By:

Schroeder, Christopher;
Sturm, Marc;
Dufke, Andreas;
Mau-Holzmann, Ulrike;
Eggermann, Thomas;
Poths, Sven;
Riess, Olaf;
Bonin, Michael

Publication type:

Article

rRNA:mRNA pairing alters the length and the symmetry of mRNA-protected fragments in ribosome profiling experiments.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1488, doi. 10.1093/bioinformatics/btt184

By:

O’Connor, Patrick B. F.;
Li, Gene-Wei;
Weissman, Jonathan S.;
Atkins, John F.;
Baranov, Pavel V.

Publication type:

Article

INstruct: a database of high-quality 3D structurally resolved protein interactome networks.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1577, doi. 10.1093/bioinformatics/btt181

By:

Meyer, Michael J.;
Das, Jishnu;
Wang, Xiujuan;
Yu, Haiyuan

Publication type:

Article

Exome-based analysis for RNA epigenome sequencing data.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1565, doi. 10.1093/bioinformatics/btt171

By:

Meng, Jia;
Cui, Xiaodong;
Rao, Manjeet K.;
Chen, Yidong;
Huang, Yufei

Publication type:

Article

International Society for Computational Biology Honors Goncalo Abecasis with Top Bioinformatics/Computational Biology Award for 2013.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1586, doi. 10.1093/bioinformatics/btt251

By:

Fogg, Christiana N.;
Kovats, Diane E.

Publication type:

Article

An HMM-based algorithm for evaluating rates of receptor–ligand binding kinetics from thermal fluctuation data.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1511

By:

Ju, Lining;
Wang, Yijie Dylan;
Hung, Ying;
Wu, Chien-Fu Jeff;
Zhu, Cheng

Publication type:

Article

Shimmer: detection of genetic alterations in tumors using next-generation sequence data.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1498, doi. 10.1093/bioinformatics/btt183

By:

Hansen, Nancy F.;
Gartner, Jared J.;
Mei, Lan;
Samuels, Yardena;
Mullikin, James C.

Publication type:

Article

Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome shotgun sequencing data.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1492, doi. 10.1093/bioinformatics/btt178

By:

Birol, Inanc;
Raymond, Anthony;
Jackman, Shaun D.;
Pleasance, Stephen;
Coope, Robin;
Taylor, Greg A.;
Yuen, Macaire Man Saint;
Keeling, Christopher I.;
Brand, Dana;
Vandervalk, Benjamin P.;
Kirk, Heather;
Pandoh, Pawan;
Moore, Richard A.;
Zhao, Yongjun;
Mungall, Andrew J.;
Jaquish, Barry;
Yanchuk, Alvin;
Ritland, Carol;
Boyle, Brian;
Bousquet, Jean

Publication type:

Article

OCSANA: optimal combinations of interventions from network analysis.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1571, doi. 10.1093/bioinformatics/btt195

By:

Vera-Licona, Paola;
Bonnet, Eric;
Barillot, Emmanuel;
Zinovyev, Andrei

Publication type:

Article

A powerful and efficient set test for genetic markers that handles confounders.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1526, doi. 10.1093/bioinformatics/btt177

By:

Listgarten, Jennifer;
Lippert, Christoph;
Kang, Eun Yong;
Xiang, Jing;
Kadie, Carl M.;
Heckerman, David

Publication type:

Article

A hierarchical model of transcriptional dynamics allows robust estimation of transcription rates in populations of single cells with variable gene copy number.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1519, doi. 10.1093/bioinformatics/btt201

By:

Woodcock, Dan J.;
Vance, Keith W.;
Komorowski, Michał;
Koentges, Georgy;
Finkenstädt, Bärbel;
Rand, David A.

Publication type:

Article

CellH5: a format for data exchange in high-content screening.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1580, doi. 10.1093/bioinformatics/btt175

By:

Sommer, Christoph;
Held, Michael;
Fischer, Bernd;
Huber, Wolfgang;
Gerlich, Daniel W.

Publication type:

Article

Mendel: the Swiss army knife of genetic analysis programs.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1568, doi. 10.1093/bioinformatics/btt187

By:

Lange, Kenneth;
Papp, Jeanette C.;
Sinsheimer, Janet S.;
Sripracha, Ram;
Zhou, Hua;
Sobel, Eric M.

Publication type:

Article

Systematic tracking of dysregulated modules identifies novel genes in cancer.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1553, doi. 10.1093/bioinformatics/btt191

By:

Srihari, Sriganesh;
Ragan, Mark A.

Publication type:

Article

A multi-layer inference approach to reconstruct condition-specific genes and their regulation.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1541, doi. 10.1093/bioinformatics/btt186

By:

Wu, Ming;
Liu, Li;
Hijazi, Hussein;
Chan, Christina

Publication type:

Article

Predicting the functional consequences of cancer-associated amino acid substitutions.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1504, doi. 10.1093/bioinformatics/btt182

By:

Shihab, Hashem A.;
Gough, Julian;
Cooper, David N.;
Day, Ian N. M.;
Gaunt, Tom R.

Publication type:

Article

Learning gene network structure from time laps cell imaging in RNAi Knock downs.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1534, doi. 10.1093/bioinformatics/btt179

By:

Failmezger, Henrik;
Praveen, Paurush;
Tresch, Achim;
Fröhlich, Holger

Publication type:

Article

HOMECAT: consensus homologs mapping for interspecific knowledge transfer and functional genomic data integration.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1574, doi. 10.1093/bioinformatics/btt189

By:

Zorzan, Simone;
Lorenzetto, Erika;
Ettorre, Michele;
Pontelli, Valeria;
Laudanna, Carlo;
Buffelli, Mario

Publication type:

Article

Promoter-proximal CCCTC-factor binding is associated with an increase in the transcriptional pausing index.

Published in:

Bioinformatics, 2013, v. 29, n. 12, p. 1485, doi. 10.1093/bioinformatics/bts596

By:

Paredes, Sur Herrera;
Melgar, Michael F.;
Sethupathy, Praveen

Publication type:

Article

Novel algorithms and the benefits of comparative validation.

Published in:

2013

By:

Smith, Robert;
Ventura, Dan;
Prince, John T.

Publication type:

Letter