Works matching IS 13674803 AND DT 2012 AND VI 28 AND IP 4

Results: 27

The role of miRNAs in complex formation and control.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 453, doi. 10.1093/bioinformatics/btr693

By:

Goh, Wilson Wen Bin;
Oikawa, Hirotaka;
Sng, Judy Chia Ghee;
Sergot, Marek;
Wong, Limsoon

Publication type:

Article

Artemis: an integrated platform for visualization and analysis of high-throughput sequence-based experimental data.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 464, doi. 10.1093/bioinformatics/btr703

By:

Carver, Tim;
Harris, Simon R.;
Berriman, Matthew;
Parkhill, Julian;
McQuillan, Jacqueline A.

Publication type:

Article

JDet: interactive calculation and visualization of function-related conservation patterns in multiple sequence alignments and structures.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 584, doi. 10.1093/bioinformatics/btr688

By:

Muth, Thilo;
García-Martín, Juan A.;
Rausell, Antonio;
Juan, David;
Valencia, Alfonso;
Pazos, Florencio

Publication type:

Article

Fast large-scale clustering of protein structures using Gauss integrals.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 510, doi. 10.1093/bioinformatics/btr692

By:

Harder, Tim;
Borg, Mikael;
Boomsma, Wouter;
Røgen, Peter;
Hamelryck, Thomas

Publication type:

Article

PopDrowser: the Population Drosophila Browser.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 595, doi. 10.1093/bioinformatics/btr691

By:

Ràmia, Miquel;
Librado, Pablo;
Casillas, Sònia;
Rozas, Julio;
Barbadilla, Antonio

Publication type:

Article

Identifying small interfering RNA loci from high-throughput sequencing data.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 457, doi. 10.1093/bioinformatics/btr687

By:

Hardcastle, Thomas J.;
Kelly, Krystyna A.;
Baulcombe, David C.

Publication type:

Article

Robust rank aggregation for gene list integration and meta-analysis.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 573, doi. 10.1093/bioinformatics/btr709

By:

Kolde, Raivo;
Laur, Sven;
Adler, Priit;
Vilo, Jaak

Publication type:

Article

BPDA2d—a 2D global optimization-based Bayesian peptide detection algorithm for liquid chromatograph–mass spectrometry.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 564, doi. 10.1093/bioinformatics/btr675

By:

Sun, Youting;
Zhang, Jianqiu;
Braga-Neto, Ulisses;
Dougherty, Edward R.

Publication type:

Article

LaTcOm: a web server for visualizing rare codon clusters in coding sequences.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 591, doi. 10.1093/bioinformatics/btr706

By:

Theodosiou, Athina;
Promponas, Vasilis J.

Publication type:

Article

Optimal structural inference of signaling pathways from unordered and overlapping gene sets.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 546, doi. 10.1093/bioinformatics/btr696

By:

Acharya, Lipi R.;
Judeh, Thair;
Wang, Guangdi;
Zhu, Dongxiao

Publication type:

Article

Approximating the set of local minima in partial RNA folding landscapes.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 523, doi. 10.1093/bioinformatics/btr715

By:

Sahoo, S.;
Albrecht, A.A.

Publication type:

Article

CLARE: Cracking the LAnguage of Regulatory Elements.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 581, doi. 10.1093/bioinformatics/btr704

By:

Taher, Leila;
Narlikar, Leelavati;
Ovcharenko, Ivan

Publication type:

Article

BOCTOPUS: improved topology prediction of transmembrane β barrel proteins.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 516, doi. 10.1093/bioinformatics/btr710

By:

Hayat, Sikander;
Elofsson, Arne

Publication type:

Article

Improved mean estimation and its application to diagonal discriminant analysis.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 531, doi. 10.1093/bioinformatics/btr690

By:

Tong, Tiejun;
Chen, Liang;
Zhao, Hongyu

Publication type:

Article

Quantifying the white blood cell transcriptome as an accessible window to the multiorgan transcriptome.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 538, doi. 10.1093/bioinformatics/btr713

By:

Kohane, Isaac S.;
Valtchinov, Vladimir I.

Publication type:

Article

Measuring the distance between multiple sequence alignments.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 495, doi. 10.1093/bioinformatics/btr701

By:

Blackburne, Benjamin P.;
Whelan, Simon

Publication type:

Article

PIE the search: searching PubMed literature for protein interaction information.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 597, doi. 10.1093/bioinformatics/btr702

By:

Kim, Sun;
Kwon, Dongseop;
Shin, Soo-Yong;
Wilbur, W. John

Publication type:

Article

Read count approach for DNA copy number variants detection.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 470, doi. 10.1093/bioinformatics/btr707

By:

Magi, Alberto;
Tattini, Lorenzo;
Pippucci, Tommaso;
Torricelli, Francesca;
Benelli, Matteo

Publication type:

Article

ART: a next-generation sequencing read simulator.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 593, doi. 10.1093/bioinformatics/btr708

By:

Huang, Weichun;
Li, Leping;
Myers, Jason R.;
Marth, Gabor T.

Publication type:

Article

SNPdbe: constructing an nsSNP functional impacts database.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 601, doi. 10.1093/bioinformatics/btr705

By:

Schaefer, Christian;
Meier, Alice;
Rost, Burkhard;
Bromberg, Yana

Publication type:

Article

MeQA: a pipeline for MeDIP-seq data quality assessment and analysis.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 587, doi. 10.1093/bioinformatics/btr699

By:

Huang, J.;
Renault, V.;
Sengenès, J.;
Touleimat, N.;
Michel, S.;
Lathrop, M.;
Tost, J.

Publication type:

Article

MotEvo: integrated Bayesian probabilistic methods for inferring regulatory sites and motifs on multiple alignments of DNA sequences.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 487, doi. 10.1093/bioinformatics/btr695

By:

Arnold, Phil;
Erb, Ionas;
Pachkov, Mikhail;
Molina, Nacho;
van Nimwegen, Erik

Publication type:

Article

Modeling mechanistic biological networks: An advanced Boolean approach.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 557, doi. 10.1093/bioinformatics/btr697

By:

Handorf, T.;
Klipp, E.

Publication type:

Article

VarSifter: Visualizing and analyzing exome-scale sequence variation data on a desktop computer.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 599, doi. 10.1093/bioinformatics/btr711

By:

Teer, Jamie K.;
Green, Eric D.;
Mullikin, James C.;
Biesecker, Leslie G.

Publication type:

Article

ESpritz: accurate and fast prediction of protein disorder.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 503, doi. 10.1093/bioinformatics/btr682

By:

Walsh, Ian;
Martin, Alberto J. M.;
Di Domenico, Tomàs;
Tosatto, Silvio C. E.

Publication type:

Article

PASSion: a pattern growth algorithm-based pipeline for splice junction detection in paired-end RNA-Seq data.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 479, doi. 10.1093/bioinformatics/btr712

By:

Zhang, Yanju;
Lameijer, Eric-Wubbo;
't Hoen, Peter A. C.;
Ning, Zemin;
Slagboom, P. Eline;
Ye, Kai

Publication type:

Article

htSeqTools: high-throughput sequencing quality control, processing and visualization in R.

Published in:

Bioinformatics, 2012, v. 28, n. 4, p. 589, doi. 10.1093/bioinformatics/btr700

By:

Planet, Evarist;
Attolini, Camille Stephan-Otto;
Reina, Oscar;
Flores, Oscar;
Rossell, David

Publication type:

Article