Works matching IS 13674803 AND DT 2012 AND VI 28 AND IP 24

Results: 29

A high-performance computing toolset for relatedness and principal component analysis of SNP data.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3326, doi. 10.1093/bioinformatics/bts606

By:

Zheng, Xiuwen;
Levine, David;
Shen, Jess;
Gogarten, Stephanie M.;
Laurie, Cathy;
Weir, Bruce S.

Publication type:

Article

Assessing the relationship between conservation of function and conservation of sequence using photosynthetic proteins.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3203, doi. 10.1093/bioinformatics/bts608

By:

Ashkenazi, Shaul;
Snir, Rotem;
Ofran, Yanay

Publication type:

Article

Discriminative modelling of context-specific amino acid substitution probabilities.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3240

By:

Angermüller, Christof;
Biegert, Andreas;
Söding, Johannes

Publication type:

Article

CDRUG: a web server for predicting anticancer activity of chemical compounds.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3334, doi. 10.1093/bioinformatics/bts625

By:

Li, Gong-Hua;
Huang, Jing-Fei

Publication type:

Article

Distinction immune genes of hepatitis-induced heptatocellular carcinoma.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3191

By:

Hu, Jinyu;
Gao, David Zhiwei

Publication type:

Article

Two distinct SSB protein families in nucleo-cytoplasmic large DNA viruses.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3186, doi. 10.1093/bioinformatics/bts626

By:

Kazlauskas, Darius;
Venclovas, Česlovas

Publication type:

Article

Aragonite-associated biomineralization proteins are disordered and contain interactive motifs.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3182, doi. 10.1093/bioinformatics/bts604

By:

Evans, John Spencer

Publication type:

Article

Discovering chimeric transcripts in paired-end RNA-seq data by using EricScript.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3232, doi. 10.1093/bioinformatics/bts617

By:

Benelli, Matteo;
Pescucci, Chiara;
Marseglia, Giuseppina;
Severgnini, Marco;
Torricelli, Francesca;
Magi, Alberto

Publication type:

Article

An ensemble correlation-based gene selection algorithm for cancer classification with gene expression data.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3306, doi. 10.1093/bioinformatics/bts602

By:

Piao, Yongjun;
Piao, Minghao;
Park, Kiejung;
Ryu, Keun Ho

Publication type:

Article

FOLD-EM: automated fold recognition in medium- and low-resolution (4–15 Å) electron density maps.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3265, doi. 10.1093/bioinformatics/bts616

By:

Saha, Mitul;
Morais, Marc C.

Publication type:

Article

DAFS: simultaneous aligning and folding of RNA sequences via dual decomposition.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3218, doi. 10.1093/bioinformatics/bts612

By:

Sato, Kengo;
Kato, Yuki;
Akutsu, Tatsuya;
Asai, Kiyoshi;
Sakakibara, Yasubumi

Publication type:

Article

FFPopSim: an efficient forward simulation package for the evolution of large populations.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3332, doi. 10.1093/bioinformatics/bts633

By:

Zanini, Fabio;
Neher, Richard A.

Publication type:

Article

Inference of temporally varying Bayesian Networks.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3298, doi. 10.1093/bioinformatics/bts614

By:

Thorne, Thomas;
Stumpf, Michael P. H.

Publication type:

Article

A method for integrative structure determination of protein-protein complexes.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3282, doi. 10.1093/bioinformatics/bts628

By:

Schneidman-Duhovny, Dina;
Rossi, Andrea;
Avila-Sakar, Agustin;
Kim, Seung Joong;
Velázquez-Muriel, Javier;
Strop, Pavel;
Liang, Hong;
Krukenberg, Kristin A.;
Liao, Maofu;
Kim, Ho Min;
Sobhanifar, Solmaz;
Dötsch, Volker;
Rajpal, Arvind;
Pons, Jaume;
Agard, David A.;
Cheng, Yifan;
Sali, Andrej

Publication type:

Article

Real Time Metagenomics: Using k-mers to annotate metagenomes.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3316, doi. 10.1093/bioinformatics/bts599

By:

Edwards, Robert A.;
Olson, Robert;
Disz, Terry;
Pusch, Gordon D.;
Vonstein, Veronika;
Stevens, Rick;
Overbeek, Ross

Publication type:

Article

RAPHAEL: recognition, periodicity and insertion assignment of solenoid protein structures.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3257, doi. 10.1093/bioinformatics/bts550

By:

Walsh, Ian;
Sirocco, Francesco G.;
Minervini, Giovanni;
Di Domenico, Tomás;
Ferrari, Carlo;
Tosatto, Silvio C. E.

Publication type:

Article

Olorin: combining gene flow with exome sequencing in large family studies of complex disease.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3320, doi. 10.1093/bioinformatics/bts609

By:

Morris, James A.;
Barrett, Jeffrey C.

Publication type:

Article

MULTOVL: fast multiple overlaps of genomic regions.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3318, doi. 10.1093/bioinformatics/bts607

By:

Aszódi, András

Publication type:

Article

GWASTools: an R/Bioconductor package for quality control and analysis of genome-wide association studies.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3329, doi. 10.1093/bioinformatics/bts610

By:

Gogarten, Stephanie M.;
Bhangale, Tushar;
Conomos, Matthew P.;
Laurie, Cecelia A.;
McHugh, Caitlin P.;
Painter, Ian;
Zheng, Xiuwen;
Crosslin, David R.;
Levine, David;
Lumley, Thomas;
Nelson, Sarah C.;
Rice, Kenneth;
Shen, Jess;
Swarnkar, Rohit;
Weir, Bruce S.;
Laurie, Cathy C.

Publication type:

Article

Tools for mapping high-throughput sequencing data.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3169, doi. 10.1093/bioinformatics/bts605

By:

Fonseca, Nuno A.;
Rung, Johan;
Brazma, Alvis;
Marioni, John C.

Publication type:

Article

A counting renaissance: combining stochastic mapping and empirical Bayes to quickly detect amino acid sites under positive selection.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3248, doi. 10.1093/bioinformatics/bts580

By:

Lemey, Philippe;
Minin, Vladimir N.;
Bielejec, Filip;
Kosakovsky Pond, Sergei L.;
Suchard, Marc A.

Publication type:

Article

TIBA: a tool for phylogeny inference from rearrangement data with bootstrap analysis.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3324, doi. 10.1093/bioinformatics/bts603

By:

Lin, Yu;
Rajan, Vaibhav;
Moret, Bernard M. E.

Publication type:

Article

Fast protein structure alignment using Gaussian overlap scoring of backbone peptide fragment similarity.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3274, doi. 10.1093/bioinformatics/bts618

By:

Ritchie, David W.;
Ghoorah, Anisah W.;
Mavridis, Lazaros;
Venkatraman, Vishwesh

Publication type:

Article

Lengthening of 3′UTR increases with morphological complexity in animal evolution.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3178, doi. 10.1093/bioinformatics/bts623

By:

Chen, Cho-Yi;
Chen, Shui-Tein;
Juan, Hsueh-Fen;
Huang, Hsuan-Cheng

Publication type:

Article

De novo detection of copy number variation by co-assembly.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3195, doi. 10.1093/bioinformatics/bts601

By:

Nijkamp, Jurgen F.;
van den Broek, Marcel A.;
Geertman, Jan-Maarten A.;
Reinders, Marcel J. T.;
Daran, Jean-Marc G.;
de Ridder, Dick

Publication type:

Article

Bayesian correlated clustering to integrate multiple datasets.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3290, doi. 10.1093/bioinformatics/bts595

By:

Kirk, Paul;
Griffin, Jim E.;
Savage, Richard S.;
Ghahramani, Zoubin;
Wild, David L.

Publication type:

Article

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3211, doi. 10.1093/bioinformatics/bts611

By:

Kopylova, Evguenia;
Noé, Laurent;
Touzet, Hélène

Publication type:

Article

Reference-independent comparative metagenomics using cross-assembly: crAss.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3225, doi. 10.1093/bioinformatics/bts613

By:

Dutilh, Bas E.;
Schmieder, Robert;
Nulton, Jim;
Felts, Ben;
Salamon, Peter;
Edwards, Robert A.;
Mokili, John L.

Publication type:

Article

Interactive exploration of RNA22 microRNA target predictions.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3322, doi. 10.1093/bioinformatics/bts615

By:

Loher, Phillipe;
Rigoutsos, Isidore

Publication type:

Article