Works matching IS 13674803 AND DT 2012 AND VI 28 AND IP 15

Results: 30

Robust identification of transcriptional regulatory networks using a Gibbs sampler on outlier sum statistic.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 1990

By:

Gu, Jinghua;
Xuan, Jianhua;
Riggins, Rebecca B.;
Chen, Li;
Wang, Yue;
Clarke, Robert

Publication type:

Article

POOL server: machine learning application for functional site prediction in proteins.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2078, doi. 10.1093/bioinformatics/bts321

By:

Somarowthu, Srinivas;
Ondrechen, Mary Jo

Publication type:

Article

BioMercator V3: an upgrade of genetic map compilation and quantitative trait loci meta-analysis algorithms.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2082, doi. 10.1093/bioinformatics/bts313

By:

Sosnowski, Olivier;
Charcosset, Alain;
Joets, Johann

Publication type:

Article

High-throughput analysis of epistasis in genome-wide association studies with BiForce.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 1957, doi. 10.1093/bioinformatics/bts304

By:

Gyenesei, Attila;
Moody, Jonathan;
Semple, Colin A.M.;
Haley, Chris S.;
Wei, Wen-Hua

Publication type:

Article

Software support for SBGN maps: SBGN-ML and LibSBGN.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2016, doi. 10.1093/bioinformatics/bts270

By:

van Iersel, Martijn P.;
Villéger, Alice C.;
Czauderna, Tobias;
Boyd, Sarah E.;
Bergmann, Frank T.;
Luna, Augustin;
Demir, Emek;
Sorokin, Anatoly;
Dogrusoz, Ugur;
Matsuoka, Yukiko;
Funahashi, Akira;
Aladjem, Mirit I.;
Mi, Huaiyu;
Moodie, Stuart L.;
Kitano, Hiroaki;
Le Novère, Nicolas;
Schreiber, Falk

Publication type:

Article

AS-EAST: a functional annotation tool for putative proteins encoded by alternatively spliced transcripts.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2076, doi. 10.1093/bioinformatics/bts320

By:

Shionyu, Masafumi;
Takahashi, Ken-ichi;
Go, Mitiko

Publication type:

Article

Gowinda: unbiased analysis of gene set enrichment for genome-wide association studies.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2084, doi. 10.1093/bioinformatics/bts315

By:

Kofler, Robert;
Schlötterer, Christian

Publication type:

Article

Optimal simultaneous superpositioning of multiple structures with missing data.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 1972, doi. 10.1093/bioinformatics/bts243

By:

Theobald, Douglas L.;
Steindel, Phillip A.

Publication type:

Article

Borrowing strength: a likelihood ratio test for related sparse signals.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 1980, doi. 10.1093/bioinformatics/bts316

By:

Wit, Ernst C.;
Bakewell, David J. G.

Publication type:

Article

Identification of functional CNV region networks using a CNV-gene mapping algorithm in a genome-wide scale.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2045, doi. 10.1093/bioinformatics/bts318

By:

Park, Chihyun;
Ahn, Jaegyoon;
Yoon, Youngmi;
Park, Sanghyun

Publication type:

Article

MobiDB: a comprehensive database of intrinsic protein disorder annotations.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2080, doi. 10.1093/bioinformatics/bts327

By:

Di Domenico, Tomás;
Walsh, Ian;
Martin, Alberto J.M.;
Tosatto, Silvio C.E.

Publication type:

Article

Blockwise HMM computation for large-scale population genomic inference.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2008, doi. 10.1093/bioinformatics/bts314

By:

Paul, Joshua S.;
Song, Yun S.

Publication type:

Article

Empirical Bayes conditional independence graphs for regulatory network recovery.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2029, doi. 10.1093/bioinformatics/bts312

By:

Mahdi, Rami;
Madduri, Abishek S.;
Wang, Guoqing;
Strulovici-Barel, Yael;
Salit, Jacqueline;
Hackett, Neil R.;
Crystal, Ronald G.;
Mezey, Jason G.

Publication type:

Article

Bayesian model-based clustering of temporal gene expression using autoregressive panel data approach.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2004, doi. 10.1093/bioinformatics/bts322

By:

Nascimento, Moysés;
Sáfadi, Thelma;
Silva, Fabyano Fonseca e;
Nascimento, Ana Carolina C.

Publication type:

Article

Multi-scale computational modeling of developmental biology.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2022, doi. 10.1093/bioinformatics/bts307

By:

Setty, Yaki

Publication type:

Article

miRcode: a map of putative microRNA target sites in the long non-coding transcriptome.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2062, doi. 10.1093/bioinformatics/bts344

By:

Jeggari, Ashwini;
Marks, Debora S;
Larsson, Erik

Publication type:

Article

flowPeaks: a fast unsupervised clustering for flow cytometry data via K-means and density peak finding.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2052

By:

Ge, Yongchao;
Sealfon, Stuart C.

Publication type:

Article

PyKnot: a PyMOL tool for the discovery and analysis of knots in proteins.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2069, doi. 10.1093/bioinformatics/bts299

By:

Lua, Rhonald C.

Publication type:

Article

synbreed: a framework for the analysis of genomic prediction data using R.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2086, doi. 10.1093/bioinformatics/bts335

By:

Wimmer, Valentin;
Albrecht, Theresa;
Auinger, Hans-Jürgen;
Schön, Chris-Carolin

Publication type:

Article

Application of survival analysis methodology to the quantitative analysis of LC-MS proteomics data.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 1998, doi. 10.1093/bioinformatics/bts306

By:

Tekwe, Carmen D.;
Carroll, Raymond J.;
Dabney, Alan R.

Publication type:

Article

SALIGN: a web server for alignment of multiple protein sequences and structures.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2072, doi. 10.1093/bioinformatics/bts302

By:

Braberg, Hannes;
Webb, Benjamin M.;
Tjioe, Elina;
Pieper, Ursula;
Sali, Andrej;
Madhusudhan, M.S.

Publication type:

Article

BATMAN—an R package for the automated quantification of metabolites from nuclear magnetic resonance spectra using a Bayesian model.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2088, doi. 10.1093/bioinformatics/bts308

By:

Hao, Jie;
Astle, William;
De Iorio, Maria;
Ebbels, Timothy M D

Publication type:

Article

An integrated open framework for thermodynamics of reactions that combines accuracy and coverage.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2037, doi. 10.1093/bioinformatics/bts317

By:

Noor, Elad;
Bar-Even, Arren;
Flamholz, Avi;
Lubling, Yaniv;
Davidi, Dan;
Milo, Ron

Publication type:

Article

DiNuP: a systematic approach to identify regions of differential nucleosome positioning.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 1965, doi. 10.1093/bioinformatics/bts329

By:

Fu, Kai;
Tang, Qianzi;
Feng, Jianxing;
Liu, X. Shirley;
Zhang, Yong

Publication type:

Article

DoGSiteScorer: a web server for automatic binding site prediction, analysis and druggability assessment.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2074, doi. 10.1093/bioinformatics/bts310

By:

Volkamer, Andrea;
Kuhn, Daniel;
Rippmann, Friedrich;
Rarey, Matthias

Publication type:

Article

RAxML-Light: a tool for computing terabyte phylogenies.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2064, doi. 10.1093/bioinformatics/bts309

By:

Stamatakis, A.;
Aberer, A.J.;
Goll, C.;
Smith, S.A.;
Berger, S.A.;
Izquierdo-Carrasco, F.

Publication type:

Article

The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2059, doi. 10.1093/bioinformatics/bts311

By:

Stocks, Matthew B.;
Moxon, Simon;
Mapleson, Daniel;
Woolfenden, Hugh C.;
Mohorianu, Irina;
Folkes, Leighton;
Schwach, Frank;
Dalmay, Tamas;
Moulton, Vincent

Publication type:

Article

A common ancestry for BAP1 and Uch37 regulators.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 1953, doi. 10.1093/bioinformatics/bts319

By:

Sanchez-Pulido, Luis;
Kong, Lesheng;
Ponting, Chris P.

Publication type:

Article

SYNCSA—R tool for analysis of metacommunities based on functional traits and phylogeny of the community components.

Published in:

Bioinformatics, 2012, v. 28, n. 15, p. 2067, doi. 10.1093/bioinformatics/bts325

By:

Debastiani, Vanderlei J.;
Pillar, Valério D.

Publication type:

Article

A strategy for building neuroanatomy ontologies.

Published in:

2012

By:

Osumi-Sutherland, David;
Reeve, Simon;
Mungall, Christopher J.;
Neuhaus, Fabian;
Ruttenberg, Alan;
Jefferis, Gregory S. X. E.;
Armstrong, J. Douglas

Publication type:

Correction Notice