Works matching IS 13674803 AND DT 2011 AND VI 27 AND IP 9

Results: 32

ogaraK: a population genetics simulator for malaria.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1335, doi. 10.1093/bioinformatics/btr139

By:

Antao, Tiago;
Hastings, Ian M.

Publication type:

Article

SplamiR—prediction of spliced miRNAs in plants.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1215, doi. 10.1093/bioinformatics/btr132

By:

Thieme, Christoph J.;
Gramzow, Lydia;
Lobbes, Dajana;
Theißen, Günter

Publication type:

Article

SC2ATmd: a tool for integration of the figure of merit with cluster analysis for gene expression data.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1330, doi. 10.1093/bioinformatics/btr115

By:

Olex, Amy L.;
Fetrow, Jacquelyn S.

Publication type:

Article

fastsimcoal: a continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1332, doi. 10.1093/bioinformatics/btr124

By:

Excoffier, Laurent;
Foll, Matthieu

Publication type:

Article

Large-scale learning of combinatorial transcriptional dynamics from gene expression.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1277, doi. 10.1093/bioinformatics/btr113

By:

Asif, H. M. Shahzad;
Sanguinetti, Guido

Publication type:

Article

Comparative visualization of genetic and physical maps with Strudel.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1307, doi. 10.1093/bioinformatics/btr111

By:

Bayer, Micha;
Milne, Iain;
Stephen, Gordon;
Shaw, Paul;
Cardle, Linda;
Wright, Frank;
Marshall, David

Publication type:

Article

sc-PDB: a database for identifying variations and multiplicity of ‘druggable’ binding sites in proteins.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1324, doi. 10.1093/bioinformatics/btr120

By:

Meslamani, Jamel;
Rognan, Didier;
Kellenberger, Esther

Publication type:

Article

Prediction of microRNA targets in Caenorhabditis elegans using a self-organizing map.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1247, doi. 10.1093/bioinformatics/btr144

By:

Heikkinen, Liisa;
Kolehmainen, Mikko;
Wong, Garry

Publication type:

Article

GBOOST: a GPU-based tool for detecting gene–gene interactions in genome–wide case control studies.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1309, doi. 10.1093/bioinformatics/btr114

By:

Yung, Ling Sing;
Yang, Can;
Wan, Xiang;
Yu, Weichuan

Publication type:

Article

Histogram-based DNA analysis for the visualization of chromosome, genome and species information.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1207, doi. 10.1093/bioinformatics/btr131

By:

Costa, António M.;
Machado, José T.;
Quelhas, Maria D.

Publication type:

Article

Customizable views on semantically integrated networks for systems biology.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1299, doi. 10.1093/bioinformatics/btr134

By:

Weile, Jochen;
Pocock, Matthew;
Cockell, Simon J.;
Lord, Phillip;
Dewar, James M.;
Holstein, Eva−Maria;
Wilkinson, Darren;
Lydall, David;
Hallinan, Jennifer;
Wipat, Anil

Publication type:

Article

PRIMe: a method for characterization and evaluation of pleiotropic regions from multiple genome-wide association studies.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1201, doi. 10.1093/bioinformatics/btr116

By:

Huang, Jie;
Johnson, Andrew D.;
O'Donnell, Christopher J.

Publication type:

Article

A wholly defined Agilent microarray spike-in dataset.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1284, doi. 10.1093/bioinformatics/btr135

By:

Zhu, Qianqian;
Miecznikowski, Jeffrey C.;
Halfon, Marc S.

Publication type:

Article

birgHPC: creating instant computing clusters for bioinformatics and molecular dynamics.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1320, doi. 10.1093/bioinformatics/btr109

By:

Chew, Teong Han;
Joyce-Tan, Kwee Hong;
Akma, Farizuwana;
Shamsir, Mohd Shahir

Publication type:

Article

Mixtures of common t-factor analyzers for clustering high-dimensional microarray data.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1269, doi. 10.1093/bioinformatics/btr112

By:

Baek, Jangsun;
McLachlan, Geoffrey J.

Publication type:

Article

AStream: an R package for annotating LC/MS metabolomic data.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1339, doi. 10.1093/bioinformatics/btr138

By:

Alonso, Arnald;
Julià, Antonio;
Beltran, Antoni;
Vinaixa, Maria;
Díaz, Marta;
Ibañez, Lourdes;
Correig, Xavier;
Marsal, Sara

Publication type:

Article

Compounds In Literature (CIL): screening for compounds and relatives in PubMed.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1341, doi. 10.1093/bioinformatics/btr130

By:

Grüning, Björn A.;
Senger, Christian;
Erxleben, Anika;
Flemming, Stephan;
Günther, Stefan

Publication type:

Article

Rigid substructure search.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1327, doi. 10.1093/bioinformatics/btr129

By:

Shirvanyants, David;
Alexandrova, Anastassia N.;
Dokholyan, Nikolay V.

Publication type:

Article

aCGH.Spline—an R package for aCGH dye bias normalization.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1195, doi. 10.1093/bioinformatics/btr107

By:

Fitzgerald, Tomas W.;
Larcombe, Lee D.;
Le Scouarnec, Solena;
Clayton, Stephen;
Rajan, Diana;
Carter, Nigel P.;
Redon, Richard

Publication type:

Article

ExpEdit: a webserver to explore human RNA editing in RNA-Seq experiments.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1311, doi. 10.1093/bioinformatics/btr117

By:

Picardi, Ernesto;
D'Antonio, Mattia;
Carrabino, Danilo;
Castrignanò, Tiziana;
Pesole, Graziano

Publication type:

Article

A probabilistic model of nuclear import of proteins.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1239, doi. 10.1093/bioinformatics/btr121

By:

Mehdi, Ahmed M.;
Sehgal, Muhammad Shoaib B.;
Kobe, Bostjan;
Bailey, Timothy L.;
Bodén, Mikael

Publication type:

Article

Rapid membrane protein topology prediction.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1322, doi. 10.1093/bioinformatics/btr119

By:

Hennerdal, Aron;
Elofsson, Arne

Publication type:

Article

Identifying discriminative classification-based motifs in biological sequences.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1231, doi. 10.1093/bioinformatics/btr110

By:

Vens, Celine;
Rosso, Marie-Noëlle;
Danchin, Etienne G. J.

Publication type:

Article

UniCarb-DB: a database resource for glycomic discovery.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1343, doi. 10.1093/bioinformatics/btr137

By:

Hayes, Catherine A.;
Karlsson, Niclas G.;
Struwe, Weston B.;
Lisacek, Frederique;
Rudd, Pauline M.;
Packer, Nicolle H.;
Campbell, Matthew P.

Publication type:

Article

COSINE: COndition-SpecIfic sub-NEtwork identification using a global optimization method.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1290, doi. 10.1093/bioinformatics/btr136

By:

Ma, Haisu;
Schadt, Eric E.;
Kaplan, Lee M.;
Zhao, Hongyu

Publication type:

Article

GeCo++: a C++ library for genomic features computation and annotation in the presence of variants.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1313, doi. 10.1093/bioinformatics/btr123

By:

Cereda, Matteo;
Sironi, Manuela;
Cavalleri, Matteo;
Pozzoli, Uberto

Publication type:

Article

High-throughput feature counting and measurement of roots.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1337, doi. 10.1093/bioinformatics/btr126

By:

Naeem, Asad;
French, Andrew P.;
Wells, Darren M.;
Pridmore, Tony P.

Publication type:

Article

Structure-based de novo prediction of zinc-binding sites in proteins of unknown function.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1262, doi. 10.1093/bioinformatics/btr133

By:

Zhao, Wei;
Xu, Meng;
Liang, Zhi;
Ding, Bo;
Niu, Liwen;
Liu, Haiyan;
Teng, Maikun

Publication type:

Article

TEQC: an R package for quality control in target capture experiments.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1316, doi. 10.1093/bioinformatics/btr122

By:

Hummel, Manuela;
Bonnin, Sarah;
Lowy, Ernesto;
Roma, Guglielmo

Publication type:

Article

Agos—a universal web tool for GW Argonaute-binding domain prediction.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1318, doi. 10.1093/bioinformatics/btr128

By:

Zielezinski, Andrzej;
Karlowski, Wojciech M.

Publication type:

Article

MemLoci: predicting subcellular localization of membrane proteins in eukaryotes.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1224, doi. 10.1093/bioinformatics/btr108

By:

Pierleoni, Andrea;
Martelli, Pier Luigi;
Casadio, Rita

Publication type:

Article

MrBayes on a Graphics Processing Unit.

Published in:

Bioinformatics, 2011, v. 27, n. 9, p. 1255, doi. 10.1093/bioinformatics/btr140

By:

Zhou, Jianfu;
Liu, Xiaoguang;
Stones, Douglas S.;
Xie, Qiang;
Wang, Gang

Publication type:

Article