Works matching IS 13674803 AND DT 2011 AND VI 27 AND IP 22

Results: 26

Kaviar: an accessible system for testing SNV novelty.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3216, doi. 10.1093/bioinformatics/btr540

By:

Glusman, Gustavo;
Caballero, Juan;
Mauldin, Denise E.;
Hood, Leroy;
Roach, Jared C.

Publication type:

Article

Neural fate decisions mediated by trans-activation and cis-inhibition in Notch signaling.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3158, doi. 10.1093/bioinformatics/btr551

By:

Wang, Ruiqi;
Liu, Kaihui;
Chen, Luonan;
Aihara, Kazuyuki

Publication type:

Article

Visual DSD: a design and analysis tool for DNA strand displacement systems.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3211, doi. 10.1093/bioinformatics/btr543

By:

Lakin, Matthew R.;
Youssef, Simon;
Polo, Filippo;
Emmott, Stephen;
Phillips, Andrew

Publication type:

Article

PIDO: the primary immunodeficiency disease ontology.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3193, doi. 10.1093/bioinformatics/btr531

By:

Adams, Nico;
Hoehndorf, Robert;
Gkoutos, Georgios V.;
Hansen, Gesine;
Hennig, Christian

Publication type:

Article

Lower confidence bounds for prediction accuracy in high dimensions via AROHIL Monte Carlo.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3129, doi. 10.1093/bioinformatics/btr542

By:

Dobbin, Kevin K.;
Cooke, Stephanie

Publication type:

Article

survcomp: an R/Bioconductor package for performance assessment and comparison of survival models.

Published in:

2011

By:

Schröder, Markus S.;
Culhane, Aedín C.;
Quackenbush, John;
Haibe-Kains, Benjamin

Publication type:

Case Study

A wide repertoire of miRNA binding sites: prediction and functional implications.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3093, doi. 10.1093/bioinformatics/btr534

By:

Elefant, Naama;
Altuvia, Yael;
Margalit, Hanah

Publication type:

Article

An efficient network querying method based on conditional random fields.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3173, doi. 10.1093/bioinformatics/btr524

By:

Huang, Qiang;
Wu, Ling-Yun;
Zhang, Xiang-Sun

Publication type:

Article

Weakly supervised learning of information structure of scientific abstracts—is it accurate enough to benefit real-world tasks in biomedicine?

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3179, doi. 10.1093/bioinformatics/btr536

By:

Guo, Yufan;
Korhonen, Anna;
Silins, Ilona;
Stenius, Ulla

Publication type:

Article

TFRank: network-based prioritization of regulatory associations underlying transcriptional responses.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3149

By:

Gonçalves, Joana P.;
Francisco, Alexandre P.;
Mira, Nuno P.;
Teixeira, Miguel C.;
Sá-Correia, Isabel;
Oliveira, Arlindo L.;
Madeira, Sara C.

Publication type:

Article

A non-biased framework for the annotation and classification of the non-miRNA small RNA transcriptome.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3202, doi. 10.1093/bioinformatics/btr527

By:

Pantano, Lorena;
Estivill, Xavier;
Martí, Eulalia

Publication type:

Article

RNA-Seq analysis in MeV.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3209, doi. 10.1093/bioinformatics/btr490

By:

Howe, Eleanor A.;
Sinha, Raktim;
Schlauch, Daniel;
Quackenbush, John

Publication type:

Article

inSilicoDb: an R/Bioconductor package for accessing human Affymetrix expert-curated datasets from GEO.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3204, doi. 10.1093/bioinformatics/btr529

By:

Taminau, Jonatan;
Steenhoff, David;
Coletta, Alain;
Meganck, Stijn;
Lazar, Cosmin;
de Schaetzen, Virginie;
Duque, Robin;
Molter, Colin;
Bersini, Hugues;
Nowé, Ann;
Weiss Solís, David Y.

Publication type:

Article

Improving the detection of transmembrane β-barrel chains with N-to-1 extreme learning machines.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3123, doi. 10.1093/bioinformatics/btr549

By:

Savojardo, Castrense;
Fariselli, Piero;
Casadio, Rita

Publication type:

Article

ISPyB: an information management system for synchrotron macromolecular crystallography.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3186, doi. 10.1093/bioinformatics/btr535

By:

Delagenière, Solange;
Brenchereau, Patrice;
Launer, Ludovic;
Ashton, Alun W.;
Leal, Ricardo;
Veyrier, Stéphanie;
Gabadinho, José;
Gordon, Elspeth J.;
Jones, Samuel D.;
Levik, Karl Erik;
McSweeney, Seán M.;
Monaco, Stéphanie;
Nanao, Max;
Spruce, Darren;
Svensson, Olof;
Walsh, Martin A.;
Leonard, Gordon A.

Publication type:

Article

Knime4Bio: a set of custom nodes for the interpretation of next-generation sequencing data with KNIME†.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3200, doi. 10.1093/bioinformatics/btr554

By:

Lindenbaum, Pierre;
Le Scouarnec, Solena;
Portero, Vincent;
Redon, Richard

Publication type:

Article

Unsupervised detection of genes of influence in lung cancer using biological networks.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3166, doi. 10.1093/bioinformatics/btr533

By:

Goldenberg, Anna;
Mostafavi, Sara;
Quon, Gerald;
Boutros, Paul C.;
Morris, Quaid D.

Publication type:

Article

Probabilistic alignments with quality scores: an application to short-read mapping toward accurate SNP/indel detection.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3085, doi. 10.1093/bioinformatics/btr537

By:

Hamada, Michiaki;
Wijaya, Edward;
Frith, Martin C.;
Asai, Kiyoshi

Publication type:

Article

Discovering relational-based association rules with multiple minimum supports on microarray datasets.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3142, doi. 10.1093/bioinformatics/btr526

By:

Liu, Yu-Cheng;
Cheng, Chun-Pei;
Tseng, Vincent S.

Publication type:

Article

HHfrag: HMM-based fragment detection using HHpred.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3110, doi. 10.1093/bioinformatics/btr541

By:

Kalev, Ivan;
Habeck, Michael

Publication type:

Article

The strength of intron donor splice sites in human genes displays a bell-shaped pattern.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3079, doi. 10.1093/bioinformatics/btr532

By:

Wang, Kai;
Wernersson, Rasmus;
Brunak, Søren

Publication type:

Article

DroPhEA: Drosophila phenotype enrichment analysis for insect functional genomics.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3218, doi. 10.1093/bioinformatics/btr530

By:

Weng, Meng-Pin;
Liao, Ben-Yang

Publication type:

Article

Distance-based differential analysis of gene curves.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3135, doi. 10.1093/bioinformatics/btr528

By:

Minas, Christopher;
Waddell, Simon J.;
Montana, Giovanni

Publication type:

Article

Fast filtering for RNA homology search.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3102, doi. 10.1093/bioinformatics/btr545

By:

Kolbe, Diana L.;
Eddy, Sean R.

Publication type:

Article

RASP: rapid modeling of protein side chain conformations.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3117, doi. 10.1093/bioinformatics/btr538

By:

Miao, Zhichao;
Cao, Yang;
Jiang, Taijiao

Publication type:

Article

Supporting tool suite for production proteomics.

Published in:

Bioinformatics, 2011, v. 27, n. 22, p. 3214

By:

Ma, Ze-Qiang;
Tabb, David L.;
Burden, Joseph;
Chambers, Matthew C.;
Cox, Matthew B.;
Cantrell, Michael J.;
Ham, Amy-Joan L.;
Litton, Michael D.;
Oreto, Michael R.;
Schultz, William C.;
Sobecki, Scott M.;
Tsui, Tina Y.;
Wernke, Gregory R.;
Liebler, Daniel C.

Publication type:

Article