Works matching IS 13674803 AND DT 2011 AND VI 27 AND IP 21

Results: 25

SpliceTrap: a method to quantify alternative splicing under single cellular conditions.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3010, doi. 10.1093/bioinformatics/btr508

By:

Wu, Jie;
Akerman, Martin;
Sun, Shuying;
McCombie, W. Richard;
Krainer, Adrian R.;
Zhang, Michael Q.

Publication type:

Article

Computational prediction of eukaryotic phosphorylation sites.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 2927, doi. 10.1093/bioinformatics/btr525

By:

Trost, Brett;
Kusalik, Anthony

Publication type:

Article

adegenet 1.3-1: new tools for the analysis of genome-wide SNP data.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3070, doi. 10.1093/bioinformatics/btr521

By:

Jombart, Thibaut;
Ahmed, Ismaïl

Publication type:

Article

An empirical comparison of several recent epistatic interaction detection methods.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 2936, doi. 10.1093/bioinformatics/btr512

By:

Wang, Yue;
Liu, Guimei;
Feng, Mengling;
Wong, Limsoon

Publication type:

Article

Metavir: a web server dedicated to virome analysis.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3074, doi. 10.1093/bioinformatics/btr519

By:

Roux, Simon;
Faubladier, Michaël;
Mahul, Antoine;
Paulhe, Nils;
Bernard, Aurélien;
Debroas, Didier;
Enault, François

Publication type:

Article

Correlated evolution of transcription factors and their binding sites.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 2972, doi. 10.1093/bioinformatics/btr503

By:

Yang, Shu;
Yalamanchili, Hari Krishna;
Li, Xinran;
Yao, Kwok-Ming;
Sham, Pak Chung;
Zhang, Michael Q.;
Wang, Junwen

Publication type:

Article

Protein–protein binding affinity prediction on a diverse set of structures.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3002, doi. 10.1093/bioinformatics/btr513

By:

Moal, Iain H.;
Agius, Rudi;
Bates, Paul A.

Publication type:

Article

Semi-supervised learning improves gene expression-based prediction of cancer recurrence.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3017, doi. 10.1093/bioinformatics/btr502

By:

Shi, Mingguang;
Zhang, Bing

Publication type:

Article

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 2987

By:

Li, Heng

Publication type:

Article

Comparing bioassay response and similarity ensemble approaches to probing protein pharmacology.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3044, doi. 10.1093/bioinformatics/btr506

By:

Chen, Bin;
McConnell, Kevin J.;
Wale, Nikil;
Wild, David J.;
Gifford, Eric M.

Publication type:

Article

Finding recurrent copy number alterations preserving within-sample homogeneity.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 2949, doi. 10.1093/bioinformatics/btr488

By:

Morganella, Sandro;
Pagnotta, Stefano Maria;
Ceccarelli, Michele

Publication type:

Article

HIV Therapy Simulator: a graphical user interface for comparing the effectiveness of novel therapy regimens.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3065, doi. 10.1093/bioinformatics/btr515

By:

Lim, Huat Chye;
Curlin, Marcel E.;
Mittler, John E.

Publication type:

Article

Sparse non-negative generalized PCA with applications to metabolomics.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3029, doi. 10.1093/bioinformatics/btr522

By:

Allen, Genevera I.;
Maletić-Savatić, Mirjana

Publication type:

Article

AUC-based biomarker ensemble with an application on gene scores predicting low bone mineral density.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3050, doi. 10.1093/bioinformatics/btr516

By:

Zhao, X. G.;
Dai, W.;
Li, Y.;
Tian, L.

Publication type:

Article

Population length variability and nucleoid numbers in Escherichia coli.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 2944, doi. 10.1093/bioinformatics/btr501

By:

Athale, Chaitanya A.;
Chaudhari, Hemangi

Publication type:

Article

FLASH: fast length adjustment of short reads to improve genome assemblies.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 2957, doi. 10.1093/bioinformatics/btr507

By:

Magoč, Tanja;
Salzberg, Steven L.

Publication type:

Article

Bambus 2: scaffolding metagenomes.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 2964, doi. 10.1093/bioinformatics/btr520

By:

Koren, Sergey;
Treangen, Todd J.;
Pop, Mihai

Publication type:

Article

TopiaryExplorer: visualizing large phylogenetic trees with environmental metadata.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3067, doi. 10.1093/bioinformatics/btr517

By:

Pirrung, Meg;
Kennedy, Ryan;
Caporaso, J. Gregory;
Stombaugh, Jesse;
Wendel, Doug;
Knight, Rob

Publication type:

Article

wapRNA: a web-based application for the processing of RNA sequences.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3076, doi. 10.1093/bioinformatics/btr504

By:

Zhao, Wenming;
Liu, Wanfei;
Tian, Dongmei;
Tang, Bixia;
Wang, Yanqing;
Yu, Caixia;
Li, Rujiao;
Ling, Yunchao;
Wu, Jiayan;
Song, Shuhui;
Hu, Songnian

Publication type:

Article

Revisiting the negative example sampling problem for predicting protein–protein interactions.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3024, doi. 10.1093/bioinformatics/btr514

By:

Park, Yungki;
Marcotte, Edward M.

Publication type:

Article

Gaussian interaction profile kernels for predicting drug–target interaction.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3036, doi. 10.1093/bioinformatics/btr500

By:

van Laarhoven, Twan;
Nabuurs, Sander B.;
Marchiori, Elena

Publication type:

Article

Robust relative compression of genomes with random access.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 2979, doi. 10.1093/bioinformatics/btr505

By:

Deorowicz, Sebastian;
Grabowski, Szymon

Publication type:

Article

MapReduce implementation of a hybrid spectral library-database search method for large-scale peptide identification.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3072, doi. 10.1093/bioinformatics/btr523

By:

Kalyanaraman, Ananth;
Cannon, William R.;
Latt, Benjamin;
Baxter, Douglas J.

Publication type:

Article

High-dimensional bolstered error estimation.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 3056, doi. 10.1093/bioinformatics/btr518

By:

Sima, Chao;
Braga-Neto, Ulisses M.;
Dougherty, Edward R.

Publication type:

Article

Finding stable local optimal RNA secondary structures.

Published in:

Bioinformatics, 2011, v. 27, n. 21, p. 2994, doi. 10.1093/bioinformatics/btr510

By:

Li, Yuan;
Zhang, Shaojie

Publication type:

Article