Works matching IS 13674803 AND DT 2011 AND VI 27 AND IP 16

Results: 29

Noise reduction in genome-wide perturbation screens using linear mixed-effect models.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2173, doi. 10.1093/bioinformatics/btr359

By:

Yu, Danni;
Danku, John;
Baxter, Ivan;
Kim, Sungjin;
Vatamaniuk, Olena K.;
Salt, David E.;
Vitek, Olga

Publication type:

Article

SNPman: a program for genotype calling using run data from TaqMan allelic discrimination.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2306, doi. 10.1093/bioinformatics/btr383

By:

Konopac, Martin;
Dusatkova, Petra;
Cinek, Ondrej

Publication type:

Article

Enhancing the rate of scaffold discovery with diversity-oriented prioritization.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2271, doi. 10.1093/bioinformatics/btr369

By:

Swamidass, S. Joshua;
Calhoun, Bradley T.;
Bittker, Joshua A.;
Bodycombe, Nicole E.;
Clemons, Paul A.

Publication type:

Article

Biologically inspired EM image alignment and neural reconstruction.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2216, doi. 10.1093/bioinformatics/btr378

By:

Knowles-Barley, Seymour;
Butcher, Nancy J.;
Meinertzhagen, Ian A.;
Armstrong, J. Douglas

Publication type:

Article

Integration and visualization of host–pathogen data related to infectious diseases.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2279, doi. 10.1093/bioinformatics/btr391

By:

Driscoll, Timothy;
Gabbard, Joseph L.;
Mao, Chunhong;
Dalay, Oral;
Shukla, Maulik;
Freifeld, Clark C.;
Hoen, Anne Gatewood;
Brownstein, John S.;
Sobral, Bruno W.

Publication type:

Article

Gaia: automated quality assessment of protein structure models.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2209, doi. 10.1093/bioinformatics/btr374

By:

Kota, Pradeep;
Ding, Feng;
Ramachandran, Srinivas;
Dokholyan, Nikolay V.

Publication type:

Article

Methyl-Analyzer—whole genome DNA methylation profiling.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2296, doi. 10.1093/bioinformatics/btr356

By:

Xin, Yurong;
Ge, Yongchao;
Haghighi, Fatemeh G.

Publication type:

Article

RIP: the regulatory interaction predictor—a machine learning-based approach for predicting target genes of transcription factors.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2239, doi. 10.1093/bioinformatics/btr366

By:

Bauer, Tobias;
Eils, Roland;
König, Rainer

Publication type:

Article

MGV: a generic graph viewer for comparative omics data.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2248, doi. 10.1093/bioinformatics/btr351

By:

Symons, Stephan;
Nieselt, Kay

Publication type:

Article

eResponseNet: a package prioritizing candidate disease genes through cellular pathways.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2319, doi. 10.1093/bioinformatics/btr380

By:

Huang, Jialiang;
Liu, Yi;
Zhang, Wei;
Yu, Hong;
Han, Jing-Dong J.

Publication type:

Article

Menu-driven cloud computing and resource sharing for R and Bioconductor.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2309, doi. 10.1093/bioinformatics/btr364

By:

Bolouri, Hamid;
Dulepet, Rajiv;
Angerman, Michael

Publication type:

Article

The Cardiac Atlas Project—an imaging database for computational modeling and statistical atlases of the heart.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2288, doi. 10.1093/bioinformatics/btr360

By:

Fonseca, Carissa G.;
Backhaus, Michael;
Bluemke, David A.;
Britten, Randall D.;
Chung, Jae Do;
Cowan, Brett R.;
Dinov, Ivo D.;
Finn, J. Paul;
Hunter, Peter J.;
Kadish, Alan H.;
Lee, Daniel C.;
Lima, Joao A. C.;
Medrano−Gracia, Pau;
Shivkumar, Kalyanam;
Suinesiaputra, Avan;
Tao, Wenchao;
Young, Alistair A.

Publication type:

Article

Decomposing flux distributions into elementary flux modes in genome-scale metabolic networks.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2256, doi. 10.1093/bioinformatics/btr367

By:

Chan, Siu Hung Joshua;
Ji, Ping

Publication type:

Article

Improving the prediction of disulfide bonds in Eukaryotes with machine learning methods and protein subcellular localization.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2224, doi. 10.1093/bioinformatics/btr387

By:

Savojardo, Castrense;
Fariselli, Piero;
Alhamdoosh, Monther;
Martelli, Pier Luigi;
Pierleoni, Andrea;
Casadio, Rita

Publication type:

Article

ODORactor: a web server for deciphering olfactory coding.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2302, doi. 10.1093/bioinformatics/btr385

By:

Liu, Xinyi;
Su, Xubo;
Wang, Fei;
Huang, Zhimin;
Wang, Qi;
Li, Zhen;
Zhang, Ruina;
Wu, Lifang;
Pan, Yi;
Chen, Yingyi;
Zhuang, Hanyi;
Chen, Guoqiang;
Shi, Ting;
Zhang, Jian

Publication type:

Article

CAMPAIGN: an open-source library of GPU-accelerated data clustering algorithms.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2322, doi. 10.1093/bioinformatics/btr386

By:

Kohlhoff, Kai J.;
Sosnick, Marc H.;
Hsu, William T.;
Pande, Vijay S.;
Altman, Russ B.

Publication type:

Article

KvSNP: accurately predicting the effect of genetic variants in voltage-gated potassium channels.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2181, doi. 10.1093/bioinformatics/btr365

By:

Stead, L. F.;
Wood, I. C.;
Westhead, D. R.

Publication type:

Article

HAPGEN2: simulation of multiple disease SNPs.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2304, doi. 10.1093/bioinformatics/btr341

By:

Su, Zhan;
Marchini, Jonathan;
Donnelly, Peter

Publication type:

Article

In silico analysis of phytoene synthase and its promoter reveals hints for regulation mechanisms of carotenogenesis in Duanliella bardawil.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2201, doi. 10.1093/bioinformatics/btr371

By:

Lao, Yong-Min;
Xiao, Lan;
Ye, Zhi−Wei;
Jiang, Jian-Guo;
Zhou, Shi-Shui

Publication type:

Article

Genomic data integration using guided clustering.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2231, doi. 10.1093/bioinformatics/btr363

By:

Maneck, Matthias;
Schrader, Alexandra;
Kube, Dieter;
Spang, Rainer

Publication type:

Article

GeneNetWeaver: in silico benchmark generation and performance profiling of network inference methods.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2263, doi. 10.1093/bioinformatics/btr373

By:

Schaffter, Thomas;
Marbach, Daniel;
Floreano, Dario

Publication type:

Article

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2300, doi. 10.1093/bioinformatics/btr372

By:

Grant, Jason R.;
Arantes, Adriano S.;
Liao, Xiaoping;
Stothard, Paul

Publication type:

Article

AMIGO, a toolbox for advanced model identification in systems biology using global optimization.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2311, doi. 10.1093/bioinformatics/btr370

By:

Balsa-Canto, Eva;
Banga, Julio R.

Publication type:

Article

Paired-end RAD-seq for de novo assembly and marker design without available reference.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2187, doi. 10.1093/bioinformatics/btr346

By:

Willing, Eva-Maria;
Hoffmann, Margarete;
Klein, Juliane D.;
Weigel, Detlef;
Dreyer, Christine

Publication type:

Article

Metab: an R package for high-throughput analysis of metabolomics data generated by GC-MS.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2316, doi. 10.1093/bioinformatics/btr379

By:

Aggio, Raphael;
Villas−Bôas, Silas Granato;
Ruggiero, Katya

Publication type:

Article

UCHIME improves sensitivity and speed of chimera detection.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2194, doi. 10.1093/bioinformatics/btr381

By:

Edgar, Robert C.;
Haas, Brian J.;
Clemente, Jose C.;
Quince, Christopher;
Knight, Rob

Publication type:

Article

MetaABC—an integrated metagenomics platform for data adjustment, binning and clustering.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2298, doi. 10.1093/bioinformatics/btr376

By:

Su, Chien-Hao;
Hsu, Ming-Tsung;
Wang, Tse−Yi;
Chiang, Sufeng;
Cheng, Jen-Hao;
Weng, Francis C.;
Kao, Cheng−Yan;
Wang, Daryi;
Tsai, Huai-Kuang

Publication type:

Article

KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2314, doi. 10.1093/bioinformatics/btr377

By:

Wrzodek, Clemens;
Dräger, Andreas;
Zell, Andreas

Publication type:

Article

Bioinformatics challenges for personalized medicine.

Published in:

Bioinformatics, 2011, v. 27, n. 16, p. 2324, doi. 10.1093/bioinformatics/btr408

By:

Fernald, G. H.;
Capriotti, E.;
Daneshjou, R.;
Karczewski, K. J.;
Altman, R. B.

Publication type:

Article