Works matching IS 13674803 AND DT 2010 AND VI 26 AND IP 7

Results: 27

Viewing cancer genes from co-evolving gene modules.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 919, doi. 10.1093/bioinformatics/btq055

By:

Jing Zhu;
Hui Xiao;
Xiaopei Shen;
Jing Wang;
Jinfeng Zou;
Lin Zhang;
Da Yang;
Wencai Ma;
Chen Yao;
Xue Gong;
Min Zhang;
Yang Zhang;
Zheng Guo

Publication type:

Article

Assigning roles to DNA regulatory motifs using comparative genomics.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 860, doi. 10.1093/bioinformatics/btq049

By:

Buske, Fabian A.;
Bodén, Mikael;
Bauer, Denis C.;
Bailey, Timothy L.

Publication type:

Article

Modeling macro–molecular interfaces with Intervor.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 964, doi. 10.1093/bioinformatics/btq052

By:

Loriot, Sébastien;
Cazals, Frédéric

Publication type:

Article

How significant is a protein structure similarity with TM-score = 0.5?

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 889, doi. 10.1093/bioinformatics/btq066

By:

Jinrui Xu;
Yang Zhang

Publication type:

Article

Treephyler: fast taxonomic profiling of metagenomes.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 960, doi. 10.1093/bioinformatics/btq070

By:

Schreiber, Fabian;
Gumrich, Peter;
Daniel, Rolf;
Meinicke, Peter

Publication type:

Article

iPHACE: integrative navigation in pharmacological space.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 985, doi. 10.1093/bioinformatics/btq061

By:

Garcia-Serna, Ricard;
Ursu, Oleg;
Oprea, Tudor I.;
Mestres, Jordi

Publication type:

Article

Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 971, doi. 10.1093/bioinformatics/btq048

By:

Gao, Jing;
Tarcea, V. Glenn;
Karnovsky, Alla;
Mirel, Barbara R.;
Weymouth, Terry E.;
Beecher, Christopher W.;
Cavalcoli, James D.;
Athey, Brian D.;
Omenn, Gilbert S.;
Burant, Charles F.;
Jagadish, H. V.

Publication type:

Article

Accelerated similarity searching and clustering of large compound sets by geometric embedding and locality sensitive hashing.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 953, doi. 10.1093/bioinformatics/btq067

By:

Yiqun Cao;
Tao Jiang;
Girke, Thomas

Publication type:

Article

GO-Bayes: Gene Ontology-based overrepresentation analysis using a Bayesian approach.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 905, doi. 10.1093/bioinformatics/btq059

By:

Song Zhang;
Jing Cao;
Kong, Y. Megan;
Scheuermann, Richard H.

Publication type:

Article

A link between H3K27me3 mark and exon length in the gene promoters of pluripotent and differentiated cells.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 855, doi. 10.1093/bioinformatics/btq047

By:

Liang Chen

Publication type:

Article

An optimal experimental design approach to model discrimination in dynamic biochemical systems.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 939, doi. 10.1093/bioinformatics/btq074

By:

Skanda, Dominik;
Lebiedz, Dirk

Publication type:

Article

SoDA2: a Hidden Markov Model approach for identification of immunoglobulin rearrangements.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 867, doi. 10.1093/bioinformatics/btq056

By:

Munshaw, Supriya;
Kepler, Thomas B.

Publication type:

Article

A meta-analysis of two-dimensional electrophoresis pattern of the Parkinson's disease-related protein DJ-1.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 946, doi. 10.1093/bioinformatics/btq073

By:

Natale, Massimo;
Bonino, Dario;
Consoli, Paolo;
Alberio, Tiziana;
Ravid, Rivka G.;
Fasano, Mauro;
Bucci, Enrico M.

Publication type:

Article

CandiSNPer: a web tool for the identification of candidate SNPs for causal variants.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 969, doi. 10.1093/bioinformatics/btq068

By:

Schmitt, Armin O.;
Aßmus, Jens;
Bortfeldt, Ralf H.;
Brockmann, Gudrun A.

Publication type:

Article

PaperMaker: validation of biomedical scientific publications.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 982, doi. 10.1093/bioinformatics/btq060

By:

Rebholz-Schuhmann, D.;
Kavaliauskas, S.;
Pezik, P.

Publication type:

Article

GOSemSim: an R package for measuring semantic similarity among GO terms and gene products.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 976, doi. 10.1093/bioinformatics/btq064

By:

Guangchuang Yu;
Fei Li;
Yide Qin;
Xiaochen Bo;
Yibo Wu;
Shengqi Wang

Publication type:

Article

Gene function prediction from synthetic lethality networks via ranking on demand.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 912, doi. 10.1093/bioinformatics/btq053

By:

Lippert, Christoph;
Ghahramani, Zoubin;
Borgwardt, Karsten M.

Publication type:

Article

Skyline: an open source document editor for creating and analyzing targeted proteomics experiments.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 966, doi. 10.1093/bioinformatics/btq054

By:

MacLean, Brendan;
Tomazela, Daniela M.;
Shulman, Nicholas;
Chambers, Matthew;
Finney, Gregory L.;
Frewen, Barbara;
Kern, Randall;
Tabb, David L.;
Liebler, Daniel C.;
MacCoss, Michael J.

Publication type:

Article

MULTICOM: a multi-level combination approach to protein structure prediction and its assessments in CASP8.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 882, doi. 10.1093/bioinformatics/btq058

By:

Zheng Wang;
Eickholt, Jesse;
Jianlin Cheng

Publication type:

Article

EBImage—an R package for image processing with applications to cellular phenotypes.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 979, doi. 10.1093/bioinformatics/btq046

By:

Pau, Grégoire;
Fuchs, Florian;
Sklyar, Oleg;
Boutros, Michael;
Huber, Wolfgang

Publication type:

Article

DASS-GUI: a user interface for identification and analysis of significant patterns in non-sequential data.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 987, doi. 10.1093/bioinformatics/btq071

By:

Hollunder, Jens;
Friedel, Maik;
Kuiper, Martin;
Wilhelm, Thomas

Publication type:

Article

Standard virtual biological parts: a repository of modular modeling components for synthetic biology.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 925, doi. 10.1093/bioinformatics/btq063

By:

Cooling, M. T.;
Rouilly, V.;
Misirli, G.;
Lawson, J.;
Yu, T.;
Hallinan, J.;
Wipat, A.

Publication type:

Article

Snoopy—a unifying Petri net framework to investigate biomolecular networks.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 974, doi. 10.1093/bioinformatics/btq050

By:

Rohr, Christian;
Marwan, Wolfgang;
Heiner, Monika

Publication type:

Article

Phybase: an R package for species tree analysis.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 962, doi. 10.1093/bioinformatics/btq062

By:

Liang Liu;
Lili Yu

Publication type:

Article

Regulatory impact factors: unraveling the transcriptional regulation of complex traits from expression data.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 896, doi. 10.1093/bioinformatics/btq051

By:

Reverter, Antonio;
Hudson, Nicholas J.;
Nagaraj, Shivashankar H.;
Pérez-Enciso, Miguel;
Dalrymple, Brian P.

Publication type:

Article

Fast and SNP-tolerant detection of complex variants and splicing in short reads.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 873, doi. 10.1093/bioinformatics/btq057

By:

Wu, Thomas D.;
Nacu, Serban

Publication type:

Article

SBRML: a markup language for associating systems biology data with models.

Published in:

Bioinformatics, 2010, v. 26, n. 7, p. 932, doi. 10.1093/bioinformatics/btq069

By:

Dada, Joseph O.;
Spasić, Irena;
Paton, Norman W.;
Mendes, Pedro

Publication type:

Article