Works matching IS 13674803 AND DT 2010 AND VI 26 AND IP 5

Results: 25

Multifactor dimensionality reduction for graphics processing units enables genome-wide testing of epistasis in sporadic ALS.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 694, doi. 10.1093/bioinformatics/btq009

By:

Greene, Casey S.;
Sinnott-Armstrong, Nicholas A.;
Himmelstein, Daniel S.;
Park, Paul J.;
Moore, Jason H.;
Harris, Brent T.

Publication type:

Article

rMAT - an R/Bioconductor package for analyzing ChIP-chip experiments.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 678, doi. 10.1093/bioinformatics/btq023

By:

Droit, Arnaud;
Cheung, Charles;
Gottardo, Raphael

Publication type:

Article

BamView: viewing mapped read alignment data in the context of the reference sequence.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 676, doi. 10.1093/bioinformatics/btq010

By:

Carver, Tim;
Böhme, Ulrike;
Otto, Thomas D.;
Parkhill, Julian;
Berriman, Matthew

Publication type:

Article

Active site prediction using evolutionary and structural information.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 617, doi. 10.1093/bioinformatics/btq008

By:

Sankararaman, Sriram;
Fei Sha;
Kirsch, Jack F.;
Jordan, Michael I.;
Sjölander, Kimmen

Publication type:

Article

Protein secondary structure appears to be robust under in silico evolution while protein disorder appears not to be.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 625, doi. 10.1093/bioinformatics/btq012

By:

Schaefer, Christian;
Schlessinger, Avner;
Rost, Burkhard

Publication type:

Article

iDBPs: a web server for the identification of DNA binding proteins.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 692, doi. 10.1093/bioinformatics/btq019

By:

Nimrod, Guy;
Schushan, Maya;
Szilágyi, András;
Leslie, Christina;
Ben-Tal, Nir

Publication type:

Article

Next-generation bioinformatics: using many-core processor architecture to develop a web service for sequence alignment.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 683, doi. 10.1093/bioinformatics/btq017

By:

Gálvez, Sergio;
Díaz, David;
Hernández, Pilar;
Esteban, Francisco J.;
Caballero, Juan A.;
Dorado, Gabriel

Publication type:

Article

Disambiguating the species of biomedical named entities using natural language parsers.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 661, doi. 10.1093/bioinformatics/btq002

By:

Xinglong Wang;
Jun'ichi Tsujii;
Ananiadou, Sophia

Publication type:

Article

RNAsnoop: efficient target prediction for H/ACA snoRNAs.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 610, doi. 10.1093/bioinformatics/btp680

By:

Tafer, Hakim;
Kehr, Stephanie;
Hertel, Jana;
Hofacker, Ivo L.;
Stadler, Peter F.

Publication type:

Article

A censored beta mixture model for the estimation of the proportion of non-differentially expressed genes.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 640, doi. 10.1093/bioinformatics/btq001

By:

Markitsis, Anastasios;
Yinglei Lai

Publication type:

Article

dbTEU: a protein database of trace element utilization.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 700, doi. 10.1093/bioinformatics/btp705

By:

Yan Zhang;
Gladyshev, Vadim N.

Publication type:

Article

Xper2: introducing e-taxonomy.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 703, doi. 10.1093/bioinformatics/btp715

By:

Ung, Visotheary;
Dubus, Guillaume;
Zaragüeta-Bagils, René;
Vignes-Lebbe, Régine

Publication type:

Article

Fast and accurate long-read alignment with Burrows–Wheeler transform.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 589, doi. 10.1093/bioinformatics/btp698

By:

Heng Li;
Durbin, Richard

Publication type:

Article

MSMSpdbb: providing protein databases of closely related organisms to improve proteomic characterization of prokaryotic microbes.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 698, doi. 10.1093/bioinformatics/btq004

By:

De Souza, Gustavo A.;
Arntzen, Magnus Ø.;
Wiker, Harald G.

Publication type:

Article

Bayesian rule learning for biomedical data mining.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 668, doi. 10.1093/bioinformatics/btq005

By:

Gopalakrishnan, Vanathi;
Lustgarten, Jonathan L.;
Visweswaran, Shyam;
Cooper, Gregory F.

Publication type:

Article

CD-HIT Suite: a web server for clustering and comparing biological sequences.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 680, doi. 10.1093/bioinformatics/btq003

By:

Ying Huang;
Beifang Niu;
Ying Gao;
Limin Fu;
Weizhong Li

Publication type:

Article

Faster computation of exact RNA shape probabilities.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 632, doi. 10.1093/bioinformatics/btq014

By:

Janssen, Stefan;
Giegerich, Robert

Publication type:

Article

Improving protein secondary structure prediction using a simple k-mer model.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 596, doi. 10.1093/bioinformatics/btq020

By:

Madera, Martin;
Calmus, Ryan;
Thiltgen, Grant;
Karplus, Kevin;
Gough, Julian

Publication type:

Article

Exploring classification strategies with the CoEPrA 2006 contest.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 603, doi. 10.1093/bioinformatics/btq021

By:

Demir-Kavuk, Ozgur;
Riedesel, Henning;
Knapp, Ernst-Walter

Publication type:

Article

ProteinWorldDB: querying radical pairwise alignments among protein sets from complete genomes.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 705, doi. 10.1093/bioinformatics/btq011

By:

Otto, Thomas Dan;
Catanho, Marcos;
Tristão, Cristian;
Bezerra, Márcia;
Fernandes, Renan Mathias;
Elias, Guilherme Steinberger;
Scaglia, Alexandre Capeletto;
Bovermann, Bill;
Berstis, Viktors;
Lifschitz, Sergio;
De Miranda, Antonio Basílio;
Degrave, Wim

Publication type:

Article

PSiFR: an integrated resource for prediction of protein structure and function.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 687, doi. 10.1093/bioinformatics/btq006

By:

Pandit, Shashi B.;
Brylinski, Michal;
Hongyi Zhou;
Mu Gao;
Arakaki, Adrian K.;
Skolnick, Jeffrey

Publication type:

Article

Computational quantification of metabolic fluxes from a single isotope snapshot: application to an animal biopsy.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 653, doi. 10.1093/bioinformatics/btq018

By:

Binsl, Thomas W.;
Alders, David J. C.;
Heringa, Jaap;
Groeneveld, A. B. Johan;
Van Beek, Johannes H. G. M.

Publication type:

Article

PyRosetta: a script-based interface for implementing molecular modeling algorithms using Rosetta.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 689, doi. 10.1093/bioinformatics/btq007

By:

Chaudhury, Sidhartha;
Lyskov, Sergey;
Gray, Jeffrey J.

Publication type:

Article

Random distance dependent attachment as a model for neural network generation in the Caenorhabditis elegans.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 647, doi. 10.1093/bioinformatics/btq015

By:

Itzhack, Royi;
Louzoun, Yoram

Publication type:

Article

NEMO: a tool for analyzing gene and chromosome territory distributions from 3D-FISH experiments.

Published in:

Bioinformatics, 2010, v. 26, n. 5, p. 696, doi. 10.1093/bioinformatics/btq013

By:

Iannuccelli, E.;
Mompart, F.;
Gellin, J.;
Lahbib-Mansais, Y.;
Yerle, M.;
Boudier, T.

Publication type:

Article