Works matching IS 13674803 AND DT 2010 AND VI 26 AND IP 4

Results: 26

Penalized mixtures of factor analyzers with application to clustering high-dimensional microarray data.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 501, doi. 10.1093/bioinformatics/btp707

By:

Benhuai Xie;
Wei Pan;
Xiaotong Shen

Publication type:

Article

Pandora, a PAthway and Network DiscOveRy Approach based on common biological evidence.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 529, doi. 10.1093/bioinformatics/btp701

By:

Zhang, Kelvin Xi;
Ouellette, B. F. Francis

Publication type:

Article

BRAT: bisulfite-treated reads analysis tool.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 572, doi. 10.1093/bioinformatics/btp706

By:

Harris, Elena Y.;
Ponts, Nadia;
Levchuk, Aleksandr;
Le Roch, Karine;
Lonardi, Stefano

Publication type:

Article

ConceptGen: a gene set enrichment and gene set relation mapping tool.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 456, doi. 10.1093/bioinformatics/btp683

By:

Sartor, Maureen A.;
Mahavisno, Vasudeva;
Keshamouni, Venkateshwar G.;
Cavalcoli, James;
Wright, Zachary;
Karnovsky, Alla;
Kuick, Rork;
Jagadish, H. V.;
Mirel, Barbara;
Weymouth, Terry;
Athey, Brian;
Omenn, Gilbert S.

Publication type:

Article

COPS Benchmark: interactive analysis of database search methods.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 574, doi. 10.1093/bioinformatics/btp712

By:

Frank, Karl;
Gruber, Markus;
Sippl, Manfred J.

Publication type:

Article

Visualizing SNP statistics in the context of linkage disequilibrium using LD-Plus.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 578, doi. 10.1093/bioinformatics/btp678

By:

Bush, William S.;
Dudek, Scott M.;
Ritchie, Marylyn D.

Publication type:

Article

GWAS Analyzer: integrating genotype, phenotype and public annotation data for genome-wide association study analysis.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 560, doi. 10.1093/bioinformatics/btp714

By:

Fong, Christine;
Ko, Dennis C.;
Wasnick, Michael;
Radey, Matthew;
Miller, Samuel I.;
Brittnacher, Mitchell

Publication type:

Article

WebPARE: web-computing for inferring genetic or transcriptional interactions.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 582, doi. 10.1093/bioinformatics/btp684

By:

Cheng-Long Chuang;
Jia-Hong Wu;
Chi-Sheng Cheng;
Shieh, Grace S.

Publication type:

Article

Bioinformatics challenges for genome-wide association studies.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 445, doi. 10.1093/bioinformatics/btp713

By:

Moore, Jason H.;
Asselbergs, Folkert W.;
Williams, Scott M.

Publication type:

Article

GWAF: an R package for genome-wide association analyses with family data.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 580, doi. 10.1093/bioinformatics/btp710

By:

Ming-Huei Chen;
Qiong Yang

Publication type:

Article

jORCA: easily integrating bioinformatics Web Services.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 553, doi. 10.1093/bioinformatics/btp709

By:

Martin-Requena, Victoria;
Ríos, Javier;
García, Maximiliano;
Ramírez, Sergio;
Trelles, Oswaldo

Publication type:

Article

r2cat: synteny plots and comparative assembly.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 570, doi. 10.1093/bioinformatics/btp690

By:

Husemann, Peter;
Stoye, Jens

Publication type:

Article

Limited contribution of stem-loop potential to symmetry of single-stranded genomic DNA.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 478, doi. 10.1093/bioinformatics/btp703

By:

Shang-Hong Zhang;
Ya-Zhi Huang

Publication type:

Article

Copy number variant detection in inbred strains from short read sequence data.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 565, doi. 10.1093/bioinformatics/btp693

By:

Simpson, Jared T.;
McIntyre, Rebecca E.;
Adams, David J.;
Durbin, Richard

Publication type:

Article

Mixture-model based estimation of gene expression variance from public database improves identification of differentially expressed genes in small sized microarray data.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 486, doi. 10.1093/bioinformatics/btp685

By:

Mingoo Kim;
Sung Bum Cho;
Ju Han Kim

Publication type:

Article

DCDB: Drug combination database.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 587, doi. 10.1093/bioinformatics/btp697

By:

Yanbin Liu;
Bin Hu;
Chengxin Fu;
Xin Chen

Publication type:

Article

Bisque: a platform for bioimage analysis and management.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 544, doi. 10.1093/bioinformatics/btp699

By:

Kvilekval, Kristian;
Fedorov, Dmitry;
Obara, Boguslaw;
Singh, Ambuj;
Manjunath, B. S.

Publication type:

Article

A novel method for accurate one-dimensional protein structure prediction based on fragment matching.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 470, doi. 10.1093/bioinformatics/btp679

By:

Zhou, Tuping;
Shu, Nanjiang;
Hovmöller, Sven

Publication type:

Article

Predicting metabolic engineering knockout strategies for chemical production: accounting for competing pathways.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 536, doi. 10.1093/bioinformatics/btp704

By:

Tepper, Naama;
Shlomi, Tomer

Publication type:

Article

MARTA: a suite of Java-based tools for assigning taxonomic status to DNA sequences.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 568, doi. 10.1093/bioinformatics/btp682

By:

Horton, Matthew;
Bodenhausen, Natacha;
Bergelson, Joy

Publication type:

Article

Power to detect selective allelic amplification in genome-wide scans of tumor data.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 518, doi. 10.1093/bioinformatics/btp694

By:

Dewal, Ninad;
Freedman, Matthew L.;
LaFramboise, Thomas;
Pe'er, Itsik

Publication type:

Article

GonadSAGE: a comprehensive SAGE database for transcript discovery on male embryonic gonad development.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 585, doi. 10.1093/bioinformatics/btp695

By:

Tin-Lap Lee;
Yunmin Li;
Hoi-Hung Cheung;
Claus, Janek;
Singh, Sumeeta;
Sastry, Chandan;
Rennert, Owen M.;
Lau, Yun-Fai Chris;
Wai-Yee Chan

Publication type:

Article

emPAI Calc—for the estimation of protein abundance from large-scale identification data by liquid chromatography-tandem mass spectrometry.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 576, doi. 10.1093/bioinformatics/btp700

By:

Shinoda, Kosaku;
Tomita, Masaru;
Ishihama, Yasushi

Publication type:

Article

RNA-Seq gene expression estimation with read mapping uncertainty.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 493, doi. 10.1093/bioinformatics/btp692

By:

Bo Li;
Ruotti, Victor;
Stewart, Ron M.;
Thomson, James A.;
Dewey, Colin N.

Publication type:

Article

Functional embedding for the classification of gene expression profiles.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 509, doi. 10.1093/bioinformatics/btp711

By:

Ping-Shi Wu;
Müller, Hans-Georg

Publication type:

Article

CMDS: a population-based method for identifying recurrent DNA copy number aberrations in cancer from high-resolution data.

Published in:

Bioinformatics, 2010, v. 26, n. 4, p. 464, doi. 10.1093/bioinformatics/btp708

By:

Qunyuan Zhang;
Ding, Li;
Larson, David E.;
Koboldt, Daniel C.;
McLellan, Michael D.;
Chen, Ken;
Xiaoqi Shi;
Kraja, Aldi;
Mardis, Elaine R.;
Wilson, Richard K.;
Borecki, Ingrid B.;
Province, Michael A.

Publication type:

Article