Works matching IS 13674803 AND DT 2009 AND VI 25 AND IP 14

Results: 24

NTAP: for NimbleGen tiling array ChIP-chip data analysis.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1838

By:

Kun He;
Xueyong Li;
Junli Zhou;
Xing-Wang Deng;
Hongyu Zhao;
Jingchu Luo

Publication type:

Article

PESTAS: a web server for EST analysis and sequence mining.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1846, doi. 10.1093/bioinformatics/btp293

By:

Seong-Hyeuk Nam;
Dae-Won Kim;
Tae-Sung Jung;
Young-Sang Choi;
Dong-Wook Kim;
Han-Suk Choi;
Sang-Haeng Choi;
Hong-Seog Park

Publication type:

Article

Estimating the posterior probability that genome-wide association findings are true or false.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1807

By:

József Bukszár;
Joseph L. McClay;
Edwin J. C. G. van den Oord

Publication type:

Article

MetaTISA: Metagenomic Translation Initiation Site Annotator for improving gene start prediction.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1843, doi. 10.1093/bioinformatics/btp272

By:

Gang-Qing Hu;
Jiang-Tao Guo;
Yong-Chu Liu;
Huaiqiu Zhu

Publication type:

Article

pGenTHREADER and pDomTHREADER: new methods for improved protein fold recognition and superfamily discrimination.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1761, doi. 10.1093/bioinformatics/btp302

By:

Anna Lobley;
Michael I. Sadowski;
David T. Jones

Publication type:

Article

baobabLUNA: the solution space of sorting by reversals.

Published in:: Bioinformatics, 2009, v. 25, n. 14, p. 1833, doi. 10.1093/bioinformatics/btp285
Publication type:: Article

Structure discovery in PPI networks using pattern-based network decomposition.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1814, doi. 10.1093/bioinformatics/btp297

By:

Philip Bachman;
Ying Liu

Publication type:

Article

Response to comment on On the inference of spatial structure from population genetics data.

Published in:: Bioinformatics, 2009, v. 25, n. 14, p. 1805, doi. 10.1093/bioinformatics/btp351
Publication type:: Article

Literature-based priors for gene regulatory networks.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1768, doi. 10.1093/bioinformatics/btp277

By:

E. Steele;
A. Tucker;
P.A.C. t Hoen;
M.J. Schuemie

Publication type:

Article

Relating periodicity of nucleosome organization and gene regulation.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1782, doi. 10.1093/bioinformatics/btp323

By:

Jun Wan;
Jimmy Lin;
Donald J. Zack;
Jiang Qian

Publication type:

Article

Rahnuma: hypergraph-based tool for metabolic pathway prediction and network comparison.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1831, doi. 10.1093/bioinformatics/btp269

By:

Aziz Mithani;
Gail M. Preston;
Jotun Hein

Publication type:

Article

Seeing the forest for the trees: using the Gene Ontology to restructure hierarchical clustering.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1789, doi. 10.1093/bioinformatics/btp327

By:

Dikla Dotan-Cohen;
Simon Kasif;
Avraham A. Melkman

Publication type:

Article

Gradient lasso for Cox proportional hazards model.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1775, doi. 10.1093/bioinformatics/btp322

By:

Insuk Sohn;
Jinseog Kim;
Sin-Ho Jung;
Changyi Park

Publication type:

Article

Comment on On the inference of spatial structure from population genetics data.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1802, doi. 10.1093/bioinformatics/btp337

By:

Eric Durand;
Chibiao Chen;
Olivier François

Publication type:

Article

Apollo: a community resource for genome annotation editing.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1836, doi. 10.1093/bioinformatics/btp314

By:

Lee Ed;
Harris Nomi;
Gibson Mark;
Chetty Raymond;
Lewis Suzanna

Publication type:

Article

Robust synthetic biology design: stochastic game theory approach.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1822, doi. 10.1093/bioinformatics/btp310

By:

Bor-Sen Chen;
Chia-Hung Chang;
Hsiao-Ching Lee

Publication type:

Article

ESG: extended similarity group method for automated protein function prediction.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1739, doi. 10.1093/bioinformatics/btp309

By:

Meghana Chitale;
Troy Hawkins;
Changsoon Park;
Daisuke Kihara

Publication type:

Article

On the inference of spatial structure from population genetics data.

Published in:: Bioinformatics, 2009, v. 25, n. 14, p. 1796, doi. 10.1093/bioinformatics/btp267
Publication type:: Article

Fast and accurate short read alignment with Burrows-Wheeler transform.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1754

By:

Heng Li;
Richard Durbin

Publication type:

Article

SOrt-ITEMS: Sequence orthology based approach for improved taxonomic estimation of metagenomic sequences.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1722, doi. 10.1093/bioinformatics/btp317

By:

M. Monzoorul Haque;
Tarini Shankar Ghosh;
Dinakar Komanduri;
Sharmila S. Mande

Publication type:

Article

Efficient computation of all perfect repeats in genomic sequences of up to half a gigabyte, with a case study on the human genome.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1746, doi. 10.1093/bioinformatics/btp321

By:

Verónica Becher;
Alejandro Deymonnaz;
Pablo Heiber

Publication type:

Article

Data structures and compression algorithms for genomic sequence data.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1731, doi. 10.1093/bioinformatics/btp319

By:

Marty C. Brandon;
Douglas C. Wallace;
Pierre Baldi

Publication type:

Article

Hierarchical hidden Markov model with application to joint analysis of ChIP-chip and ChIP-seq data.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1715, doi. 10.1093/bioinformatics/btp312

By:

Hyungwon Choi;
Alexey I. Nesvizhskii;
Debashis Ghosh;
Zhaohui S. Qin

Publication type:

Article

rtracklayer: an R package for interfacing with genome browsers.

Published in:

Bioinformatics, 2009, v. 25, n. 14, p. 1841, doi. 10.1093/bioinformatics/btp328

By:

Michael Lawrence;
Robert Gentleman;
Vincent Carey

Publication type:

Article