Works matching IS 13674803 AND DT 2008 AND VI 24 AND IP 3

Results: 30

affyGG: computational protocols for genetical genomics with Affymetrix arrays.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 433, doi. 10.1093/bioinformatics/btm614

By:

Rudi Alberts;
Gonzalo Vera;
Ritsert C. Jansen

Publication type:

Article

A note on difficult structure alignment problems.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 426, doi. 10.1093/bioinformatics/btm622

By:

Manfred J. Sippl;
Markus Wiederstein

Publication type:

Article

OBO Explorer: an editor for open biomedical ontologies in OWL.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 443, doi. 10.1093/bioinformatics/btm593

By:

Stuart Aitken;
Yin Chen;
Jonathan Bard

Publication type:

Article

ZFIQ: a software package for zebrafish biology.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 438, doi. 10.1093/bioinformatics/btm615

By:

Tianming Liu;
Jingxin Nie;
Gang Li;
Lei Guo;
Stephen T. C. Wong

Publication type:

Article

Model-based deconvolution of genome-wide DNA binding.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 396, doi. 10.1093/bioinformatics/btm592

By:

David J. Reiss;
Marc T. Facciotti;
Nitin S. Baliga

Publication type:

Article

Incorporating gene networks into statistical tests for genomic data via a spatially correlated mixture model.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 404, doi. 10.1093/bioinformatics/btm612

By:

Peng Wei;
Wei Pan

Publication type:

Article

TOM: enhancement and extension of a tool suite for in silico approaches to multigenic hereditary disorders.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 428, doi. 10.1093/bioinformatics/btm588

By:

Daniele Masotti;
Christine Nardini;
Simona Rossi;
Elena Bonora;
Giovanni Romeo;
Stefano Volinia;
Luca Benini

Publication type:

Article

TimeClust: a clustering tool for gene expression time series.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 430, doi. 10.1093/bioinformatics/btm605

By:

Paolo Magni;
Fulvia Ferrazzi;
Lucia Sacchi;
Riccardo Bellazzi

Publication type:

Article

MutaGeneSys: estimating individual disease susceptibility based on genome-wide SNP array data.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 440, doi. 10.1093/bioinformatics/btm587

By:

Julia Stoyanovich;
Itsik Peer

Publication type:

Article

Association studies for untyped markers with TUNA.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 435, doi. 10.1093/bioinformatics/btm603

By:

Xiaoquan Wen;
Dan L. Nicolae

Publication type:

Article

GEAR: genomic enrichment analysis of regional DNA copy number changes.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 420, doi. 10.1093/bioinformatics/btm582

By:

Tae-Min Kim;
Yu-Chae Jung;
Mun-Gan Rhyu;
Myeong Ho Jung;
Yeun-Jun Chung

Publication type:

Article

BAGET: a web server for the effortless retrieval of prokaryotic gene context and sequence.

Published in:: Bioinformatics, 2008, v. 24, n. 3, p. 424, doi. 10.1093/bioinformatics/btm600
Publication type:: Article

Hybrid huberized support vector machines for microarray classification and gene selection.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 412, doi. 10.1093/bioinformatics/btm579

By:

Li Wang;
Ji Zhu;
Hui Zou

Publication type:

Article

Successful anti-cancer drug targets able to pass FDA review demonstrate the identifiable signature distinct from the signatures of random genes and initially proposed targets.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 389, doi. 10.1093/bioinformatics/btm447

By:

Anatoly L. Mayburd;
Inna Golovchikova;
James L. Mulshine

Publication type:

Article

The SGN comparative map viewer.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 422, doi. 10.1093/bioinformatics/btm597

By:

Lukas A. Mueller;
Adri A. Mills;
Beth Skwarecki;
Robert M. Buels;
Naama Menda;
Steven D. Tanksley

Publication type:

Article

Exploiting indirect neighbours and topological weight to predict protein function from protein-protein interactions.

Published in:: Bioinformatics, 2008, v. 24, n. 3, p. 452, doi. 10.1093/bioinformatics/btm609
Publication type:: Article

Automated programming for bioinformatics algorithm deployment.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 450, doi. 10.1093/bioinformatics/btm602

By:

Gil Alterovitz;
Adnaan Jiwaji;
Marco F. Ramoni

Publication type:

Article

COMPARE, a multi-organism system for cross-species data comparison and transfer of information.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 447, doi. 10.1093/bioinformatics/btm599

By:

David Salgado;
Gregory Gimenez;
FranÃ§ois Coulier;
Christophe Marcelle

Publication type:

Article

ConoServer, a database for conopeptide sequences and structures.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 445, doi. 10.1093/bioinformatics/btm596

By:

Quentin Kaas;
Jan-C. Westermann;
Reena Halai;
Conan K. L. Wang;
David J. Craik

Publication type:

Article

Prediction of both conserved and nonconserved microRNA targets in animals.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 325, doi. 10.1093/bioinformatics/btm595

By:

Xiaowei Wang;
Issam M. El Naqa

Publication type:

Article

A new algorithm for cluster analysis of genomic methylation: the Helicobacter pylori case.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 383, doi. 10.1093/bioinformatics/btm621

By:

F.F. Vale;
P. EncarnaÃ§Ã£o;
J. M. B. VÃtor

Publication type:

Article

A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 374, doi. 10.1093/bioinformatics/btm620

By:

Fangxin Hong;
Rainer Breitling

Publication type:

Article

Rfold: an exact algorithm for computing local base pairing probabilities.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 367, doi. 10.1093/bioinformatics/btm591

By:

Hisanori Kiryu;
Taishin Kin;
Kiyoshi Asai

Publication type:

Article

Putative promoter regions of miRNA genes involved in evolutionarily conserved regulatory systems among vertebrates.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 303, doi. 10.1093/bioinformatics/btm589

By:

Shuji Fujita;
Hideo Iba

Publication type:

Article

Efficient peptide-MHC-I binding prediction for alleles with few known binders.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 358, doi. 10.1093/bioinformatics/btm611

By:

Laurent Jacob;
Jean-Philippe Vert

Publication type:

Article

Natural similarity measures between position frequency matrices with an application to clustering.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 350, doi. 10.1093/bioinformatics/btm610

By:

Utz J. Pape;
Sven Rahmann;
Martin Vingron

Publication type:

Article

Choosing BLAST options for better detection of orthologs as reciprocal best hits.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 319, doi. 10.1093/bioinformatics/btm585

By:

Gabriel Moreno-Hagelsieb;
Kristen Latimer

Publication type:

Article

Mutual information without the influence of phylogeny or entropy dramatically improves residue contact prediction.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 333, doi. 10.1093/bioinformatics/btm604

By:

S.D. Dunn;
L.M. Wahl;
G.B. Gloor

Publication type:

Article

Sparse representation and Bayesian detection of genome copy number alterations from microarray data.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 309, doi. 10.1093/bioinformatics/btm601

By:

Roger Pique-Regi;
Jordi Monso-Varona;
Antonio Ortega;
Robert C. Seeger;
Timothy J. Triche;
Shahab Asgharzadeh

Publication type:

Article

TFBS identification based on genetic algorithm with combined representations and adaptive post-processing.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 341, doi. 10.1093/bioinformatics/btm606

By:

Tak-Ming Chan;
Kwong-Sak Leung;
Kin-Hong Lee

Publication type:

Article