Works matching IS 13674803 AND DT 2008 AND VI 24 AND IP 24

Results: 28

SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2938, doi. 10.1093/bioinformatics/btn564

By:

Andrew D. Johnson;
Robert E. Handsaker;
Sara L. Pulit;
Marcia M. Nizzari;
Christopher J. ODonnell;
Paul I. W. de Bakker

Publication type:

Article

Database indexing for production MegaBLAST searches.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2942, doi. 10.1093/bioinformatics/btn554

By:

Aleksandr Morgulis;
George Coulouris;
Yan Raytselis;
Thomas L. Madden;
Richa Agarwala;
Alejandro A. Schäffer

Publication type:

Article

REJECTOR: software for population history inference from genetic data via a rejection algorithm.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2936, doi. 10.1093/bioinformatics/btn540

By:

Matthew J. Jobin;
Joanna L. Mountain

Publication type:

Article

BioCaster: detecting public health rumors with a Web-based text mining system.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2940, doi. 10.1093/bioinformatics/btn534

By:

Nigel Collier;
Son Doan;
Ai Kawazoe;
Reiko Matsuda Goodwin;
Mike Conway;
Yoshio Tateno;
Quoc-Hung Ngo;
Dinh Dien;
Asanee Kawtrakul;
Koichi Takeuchi;
Mika Shigematsu;
Kiyosu Taniguchi

Publication type:

Article

PConPy--a Python module for generating 2D protein maps.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2934

By:

Hui Kian Ho;
Michael J. Kuiper;
Ramamohanarao Kotagiri

Publication type:

Article

iMapper: a web application for the automated analysis and mapping of insertional mutagenesis sequence data against Ensembl genomes.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2923, doi. 10.1093/bioinformatics/btn541

By:

Jun Kong;
Fei Zhu;
Jim Stalker;
David J. Adams

Publication type:

Article

Motif Tool Manager: a web-based framework for motif discovery.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2930, doi. 10.1093/bioinformatics/btn559

By:

Vinhthuy Phan;
Nicholas A. Furlotte

Publication type:

Article

BASH: a tool for managing BeadArray spatial artefacts.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2921, doi. 10.1093/bioinformatics/btn557

By:

J. M. Cairns;
M. J. Dunning;
M. E. Ritchie;
R. Russell;
A. G. Lynch

Publication type:

Article

AUGIST: inferring species trees while accommodating gene tree uncertainty.

Published in:: Bioinformatics, 2008, v. 24, n. 24, p. 2932, doi. 10.1093/bioinformatics/btn556
Publication type:: Article

SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2928, doi. 10.1093/bioinformatics/btn550

By:

Håkan Viklund;
Andreas Bernsel;
Marcin Skwark;
Arne Elofsson

Publication type:

Article

Effective cluster-based seed design for cross-species sequence comparisons.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2926, doi. 10.1093/bioinformatics/btn547

By:

Leming Zhou;
Ingrid Mihai;
Liliana Florea

Publication type:

Article

Integrated search and alignment of protein structures.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2872, doi. 10.1093/bioinformatics/btn545

By:

Ahmet Sacan;
I. Hakki Toroslu;
Hakan Ferhatosmanoglu

Publication type:

Article

Reconstruction of transcriptional dynamics from gene reporter data using differential equations.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2901

By:

Bärbel Finkenstädt;
Elizabeth A. Heron;
Michal Komorowski;
Kieron Edwards;
Sanyi Tang;
Claire V. Harper;
Julian R. E. Davis;
Michael R. H. White;
Andrew J. Millar;
David A. Rand

Publication type:

Article

Predicting small ligand binding sites in proteins using backbone structure.

Published in:: Bioinformatics, 2008, v. 24, n. 24, p. 2865, doi. 10.1093/bioinformatics/btn543
Publication type:: Article

CARPET: a web-based package for the analysis of ChIP-chip and expression tiling data.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2918, doi. 10.1093/bioinformatics/btn542

By:

Matteo Cesaroni;
Davide Cittaro;
Alessandro Brozzi;
Pier Giuseppe Pelicci;
Lucilla Luzi

Publication type:

Article

Osiris: an integrated promoter database for Oryza sativa L.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2915, doi. 10.1093/bioinformatics/btn537

By:

Robert T. Morris;
Timothy R. OConnor;
John J. Wyrick

Publication type:

Article

Reconstructing tumor-wise protein expression in tissue microarray studies using a Bayesian cell mixture model.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2880, doi. 10.1093/bioinformatics/btn536

By:

Ronglai Shen;
Jeremy M. G. Taylor;
Debashis Ghosh

Publication type:

Article

Investigating the correspondence between transcriptomic and proteomic expression profiles using coupled cluster models.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2894, doi. 10.1093/bioinformatics/btn553

By:

Simon Rogers;
Mark Girolami;
Walter Kolch;
Katrina M. Waters;
Tao Liu;
Brian Thrall;
H. Steven Wiley

Publication type:

Article

A new rule-based algorithm for identifying metabolic markers in prostate cancer using tandem mass spectrometry.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2908, doi. 10.1093/bioinformatics/btn506

By:

Melanie Osl;
Stephan Dreiseitl;
Bernhard Pfeifer;
Klaus Weinberger;
Helmut Klocker;
Georg Bartsch;
Georg Schäfer;
Bernhard Tilg;
Armin Graber;
Christian Baumgartner

Publication type:

Article

Cross-hybridization modeling on Affymetrix exon arrays.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2887, doi. 10.1093/bioinformatics/btn571

By:

Karen Kapur;
Hui Jiang;
Yi Xing;
Wing Hung Wong

Publication type:

Article

Prediction of kinase-specific phosphorylation sites using conditional random fields.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2857, doi. 10.1093/bioinformatics/btn546

By:

Thanh Hai Dang;
Koenraad Van Leemput;
Alain Verschoren;
Kris Laukens

Publication type:

Article

IntaRNA: efficient prediction of bacterial sRNA targets incorporating target site accessibility and seed regions.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2849, doi. 10.1093/bioinformatics/btn544

By:

Anke Busch;
Andreas S. Richter;
Rolf Backofen

Publication type:

Article

Small RNA gene identification and mRNA target predictions in bacteria.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2807, doi. 10.1093/bioinformatics/btn560

By:

Christophe Pichon;
Brice Felden

Publication type:

Article

Modularity of cellular networks shows general center-periphery polarization.

Published in:: Bioinformatics, 2008, v. 24, n. 24, p. 2814, doi. 10.1093/bioinformatics/btn555
Publication type:: Article

Identifying molecular markers associated with classification of genotypes by External Logistic Biplots.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2832, doi. 10.1093/bioinformatics/btn552

By:

J. R. Demey;
J. L. Vicente-Villardón;
M. P. Galindo-Villardón;
A. Y. Zambrano

Publication type:

Article

Poisson approximation for significance in genome-wide ChIP-chip tiling arrays.

Published in:: Bioinformatics, 2008, v. 24, n. 24, p. 2825, doi. 10.1093/bioinformatics/btn549
Publication type:: Article

Faster exact Markovian probability functions for motif occurrences: a DFA-only approach.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2839, doi. 10.1093/bioinformatics/btn525

By:

Paolo Ribeca;
Emanuele Raineri

Publication type:

Article

Aggressive assembly of pyrosequencing reads with mates.

Published in:

Bioinformatics, 2008, v. 24, n. 24, p. 2818, doi. 10.1093/bioinformatics/btn548

By:

Jason R. Miller;
Arthur L. Delcher;
Sergey Koren;
Eli Venter;
Brian P. Walenz;
Anushka Brownley;
Justin Johnson;
Kelvin Li;
Clark Mobarry;
Granger Sutton

Publication type:

Article