Works matching IS 13674803 AND DT 2008 AND VI 24 AND IP 22

Results: 20

DOCKGROUND protein-protein docking decoy set.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2634, doi. 10.1093/bioinformatics/btn497

By:

Shiyong Liu;
Ying Gao;
Ilya A. Vakser

Publication type:

Article

A toolkit for capturing and sharing FuGE experiments.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2647, doi. 10.1093/bioinformatics/btn496

By:

Khalid Belhajjame;
Andrew R. Jones;
Norman W. Paton

Publication type:

Article

tCal: transcriptional probability calculator using thermodynamic model.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2639, doi. 10.1093/bioinformatics/btn494

By:

Xin Zhou;
Zhen Su

Publication type:

Article

MonkeySNP: a web portal for non-human primate single nucleotide polymorphisms.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2645

By:

Samone Khouangsathiene;
Carlo Pearson;
Summer Street;
Betsy Ferguson;
Christopher Dubay

Publication type:

Article

FunNet: an integrative tool for exploring transcriptional interactions.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2636, doi. 10.1093/bioinformatics/btn492

By:

Edi Prifti;
Jean-Daniel Zucker;
Karine Clement;
Corneliu Henegar

Publication type:

Article

MS-BID: a Java package for label-free LC-MS-based comparative proteomic analysis.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2641, doi. 10.1093/bioinformatics/btn491

By:

Daehee Hwang;
Ning Zhang;
Hookeun Lee;
Eugene Yi;
Hui Zhang;
Inyoul Y. Lee;
Leroy Hood;
Ruedi Aebersold

Publication type:

Article

GenMiner: mining non-redundant association rules from integrated gene expression data and annotations.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2643, doi. 10.1093/bioinformatics/btn490

By:

Ricardo Martinez;
Nicolas Pasquier;
Claude Pasquier

Publication type:

Article

TESE: generating specific protein structure test set ensembles.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2632, doi. 10.1093/bioinformatics/btn488

By:

Francesco Sirocco;
Silvio C. E. Tosatto

Publication type:

Article

RNAplex: a fast tool for RNA-RNA interaction search.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2657, doi. 10.1093/bioinformatics/btn193

By:

Hakim Tafer;
Ivo L. Hofacker

Publication type:

Article

Estimating large-scale signaling networks through nested effect models with intervention effects from microarray data.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2650, doi. 10.1093/bioinformatics/btm634

By:

Holger Fröhlich;
Mark Fellmann;
Holger Sültmann;
Annemarie Poustka;
Tim Beissbarth

Publication type:

Article

Profile Comparer: a program for scoring and aligning profile hidden Markov models.

Published in:: Bioinformatics, 2008, v. 24, n. 22, p. 2630, doi. 10.1093/bioinformatics/btn504
Publication type:: Article

Phylogenetic distances are encoded in networks of interacting pathways.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2579, doi. 10.1093/bioinformatics/btn503

By:

Aurélien Mazurie;
Danail Bonchev;
Benno Schwikowski;
Gregory A. Buck

Publication type:

Article

Can sugars be produced from fatty acids? A test case for pathway analysis tools.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2615, doi. 10.1093/bioinformatics/btn500

By:

Luis F. de Figueiredo;
Stefan Schuster;
Christoph Kaleta;
David A. Fell

Publication type:

Article

Physical protein-protein interactions predicted from microarrays.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2608, doi. 10.1093/bioinformatics/btn498

By:

Ta-tsen Soong;
Kazimierz O. Wrzeszczynski;
Burkhard Rost

Publication type:

Article

Functional modules integrating essential cellular functions are predictive of the response of leukaemia cells to DNA damage.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2602, doi. 10.1093/bioinformatics/btn489

By:

Katrin Sameith;
Philipp Antczak;
Elliot Marston;
Nil Turan;
Dieter Maier;
Tanja Stankovic;
Francesco Falciani

Publication type:

Article

Genome annotation in the presence of insertional RNA editing.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2571, doi. 10.1093/bioinformatics/btn487

By:

Christina Beargie;
Tsunglin Liu;
Mark Corriveau;
Ha Youn Lee;
Jonatha Gott;
Ralf Bundschuh

Publication type:

Article

GOSLING: a rule-based protein annotator using BLAST and GO.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2628, doi. 10.1093/bioinformatics/btn486

By:

Craig E. Jones;
Julian Schwerdt;
Tessa Arwen Bretag;
Ute Baumann;
Alfred L. Brown

Publication type:

Article

Bayesian learning of biological pathways on genomic data assimilation.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2592, doi. 10.1093/bioinformatics/btn483

By:

Ryo Yoshida;
Masao Nagasaki;
Rui Yamaguchi;
Seiya Imoto;
Satoru Miyano;
Tomoyuki Higuchi

Publication type:

Article

MPI-LIT: a literature-curated dataset of microbial binary protein--protein interactions.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2622, doi. 10.1093/bioinformatics/btn481

By:

Seesandra V. Rajagopala;
Johannes Goll;
N.D. Deve Gowda;
Kumar C. Sunil;
Björn Titz;
Arnab Mukherjee;
Sharmila S. Mary;
Naresh Raviswaran;
Chetan S. Poojari;
Srinivas Ramachandra;
Svetlana Shtivelband;
Stephen M. Blazie;
Julia Hofmann;
Peter Uetz

Publication type:

Article

Gene set enrichment analysis using linear models and diagnostics.

Published in:

Bioinformatics, 2008, v. 24, n. 22, p. 2586, doi. 10.1093/bioinformatics/btn465

By:

Assaf P. Oron;
Zhen Jiang;
Robert Gentleman

Publication type:

Article