Works matching IS 13674803 AND DT 2008 AND VI 24 AND IP 20

Results: 33

siDRM: an effective and generally applicable online siRNA design tool.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2405, doi. 10.1093/bioinformatics/btn442

By:

Wuming Gong;
Yongliang Ren;
Haiyan Zhou;
Yejun Wang;
Shuli Kang;
Tongbin Li

Publication type:

Article

spolTools: online utilities for analyzing spoligotypes of the Mycobacterium tuberculosis complex.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2414, doi. 10.1093/bioinformatics/btn434

By:

Chaka Tang;
Josephine F. Reyes;
Fabio Luciani;
Andrew R. Francis;
Mark M. Tanaka

Publication type:

Article

dbNEI2.0: building multilayer network for drug-NEI-disease.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2409, doi. 10.1093/bioinformatics/btn388

By:

Jing Zhang;
Tao Ma;
Yanda Li;
Shao Li

Publication type:

Article

StatAlign: an extendable software package for joint Bayesian estimation of alignments and evolutionary trees.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2403

By:

Ádám Novák;
István Miklós;
Rune Lyngsø;
Jotun Hein

Publication type:

Article

ExactFDR: exact computation of false discovery rate estimate in case-control association studies.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2407, doi. 10.1093/bioinformatics/btn379

By:

Jérôme Wojcik;
Karl Forner

Publication type:

Article

EPoS: a modular software framework for phylogenetic analysis.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2399, doi. 10.1093/bioinformatics/btn364

By:

Thasso Griebel;
Malte Brinkmeyer;
Sebastian Böcker

Publication type:

Article

MPSQ: a web tool for protein-state searching.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2412, doi. 10.1093/bioinformatics/btn427

By:

Siyuan Zheng;
Jia Sheng;
Chuan Wang;
Xiaojing Wang;
Yao Yu;
Yun Li;
Alex Michie;
Jianliang Dai;
Yang Zhong;
Pei Hao;
Lei Liu;
Yixue Li

Publication type:

Article

On the frequency of copy number variants.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2350, doi. 10.1093/bioinformatics/btn421

By:

Iuliana Ionita-Laza;
Nan M. Laird;
Benjamin A. Raby;
Scott T. Weiss;
Christoph Lange

Publication type:

Article

Optimal design of thermally stable proteins.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2339, doi. 10.1093/bioinformatics/btn450

By:

Ryan M. Bannen;
Vanitha Suresh;
George N. Phillips;
Stephen J. Wright;
Julie C. Mitchell

Publication type:

Article

Empirical profile mixture models for phylogenetic reconstruction.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2317, doi. 10.1093/bioinformatics/btn445

By:

Le Si Quang;
Olivier Gascuel;
Nicolas Lartillot

Publication type:

Article

An HMM approach to genome-wide identification of differential histone modification sites from ChIP-seq data.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2344, doi. 10.1093/bioinformatics/btn402

By:

Han Xu;
Chia-Lin Wei;
Feng Lin;
Wing-Kin Sung

Publication type:

Article

Seeder: discriminative seeding DNA motif discovery.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2303, doi. 10.1093/bioinformatics/btn444

By:

François Fauteux;
Mathieu Blanchette;
Martina V. Strömvik

Publication type:

Article

Accurate sequence-based prediction of catalytic residues.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2329, doi. 10.1093/bioinformatics/btn433

By:

Tuo Zhang;
Hua Zhang;
Ke Chen;
Shiyi Shen;
Jishou Ruan;
Lukasz Kurgan

Publication type:

Article

Optimal contact map alignment of protein-protein interfaces.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2324, doi. 10.1093/bioinformatics/btn432

By:

Vinay Pulim;
Bonnie Berger;
Jadwiga Bienkowska

Publication type:

Article

A semiparametric test to detect associations between quantitative traits and candidate genes in structured populations.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2356

By:

Meijuan Li;
Cavan Reilly;
Timothy Hanson

Publication type:

Article

Improving position-specific predictions of protein functional sites using phylogenetic motifs.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2308, doi. 10.1093/bioinformatics/btn454

By:

K. C. Dukka Bahadur;
Dennis R. Livesay

Publication type:

Article

Novel pathway compendium analysis elucidates mechanism of pro-angiogenic synthetic small molecule.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2384, doi. 10.1093/bioinformatics/btn451

By:

Kristen A. Wieghaus;
Erwin P. Gianchandani;
Mikell A. Paige;
Milton L. Brown;
Edward A. Botchwey;
Jason A. Papin

Publication type:

Article

Computational prediction of human proteins that can be secreted into the bloodstream.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2370, doi. 10.1093/bioinformatics/btn418

By:

Juan Cui;
Qi Liu;
David Puett;
Ying Xu

Publication type:

Article

Rtreemix: an R package for estimating evolutionary pathways and genetic progression scores.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2391, doi. 10.1093/bioinformatics/btn410

By:

Jasmina Bogojeska;
Adrian Alexa;
André Altmann;
Thomas Lengauer;
Jörg Rahnenführer

Publication type:

Article

Local coherence in genetic interaction patterns reveals prevalent functional versatility.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2376, doi. 10.1093/bioinformatics/btn440

By:

Shuye Pu;
Karen Ronen;
James Vlasblom;
Jack Greenblatt;
Shoshana J. Wodak

Publication type:

Article

Model-based analysis of interferon-{beta} induced signaling pathway.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2363, doi. 10.1093/bioinformatics/btn400

By:

Jaroslaw Smieja;
Mohammad Jamaluddin;
Allan R. Brasier;
Marek Kimmel

Publication type:

Article

SNAP predicts effect of mutations on protein function.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2397, doi. 10.1093/bioinformatics/btn435

By:

Yana Bromberg;
Guy Yachdav;
Burkhard Rost

Publication type:

Article

Protein function prediction and annotation in an integrated environment powered by web services (AFAWE).

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2393, doi. 10.1093/bioinformatics/btn394

By:

Anika Jöcker;
Fabian Hoffmann;
Andreas Groscurth;
Heiko Schoof

Publication type:

Article

SeqMap: mapping massive amount of oligonucleotides to the genome.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2395, doi. 10.1093/bioinformatics/btn429

By:

Hui Jiang;
Wing Hung Wong

Publication type:

Article

Bayesian ranking of biochemical system models.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2421

By:

Vladislav Vyshemirsky;
Mark A. Girolami

Publication type:

Article

Comments on On correcting the overestimation of the permutation-based false discovery rate estimator.

Published in:: Bioinformatics, 2008, v. 24, n. 20, p. 2420, doi. 10.1093/bioinformatics/btn456
Publication type:: Article

cneViewer: a database of conserved non-coding elements for studies of tissue-specific gene regulation.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2418, doi. 10.1093/bioinformatics/btn443

By:

Jason Persampieri;
Deborah I. Ritter;
Daniel Lees;
Jessica Lehoczky;
Qiang Li;
Su Guo;
Jeffrey H. Chuang

Publication type:

Article

ITFP: an integrated platform of mammalian transcription factors.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2416, doi. 10.1093/bioinformatics/btn439

By:

Guangyong Zheng;
Kang Tu;
Qing Yang;
Yun Xiong;
Chaochun Wei;
Lu Xie;
Yangyong Zhu;
Yixue Li

Publication type:

Article

MotifVoter: a novel ensemble method for fine-grained integration of generic motif finders.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2288, doi. 10.1093/bioinformatics/btn420

By:

Edward Wijaya;
Siu-Ming Yiu;
Ngo Thanh Son;
Rajaraman Kanagasabai;
Wing-Kin Sung

Publication type:

Article

Markov model plus k-word distributions: a synergy that produces novel statistical measures for sequence comparison.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2296, doi. 10.1093/bioinformatics/btn436

By:

Qi Dai;
Yanchun Yang;
Tianming Wang

Publication type:

Article

Fast and accurate search for non-coding RNA pseudoknot structures in genomes.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2281, doi. 10.1093/bioinformatics/btn393

By:

Zhibin Huang;
Yong Wu;
Joseph Robertson;
Liang Feng;
Russell L. Malmberg;
Liming Cai

Publication type:

Article

A novel CHHC Zn-finger domain found in spliceosomal proteins and tRNA modifying enzymes.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2277, doi. 10.1093/bioinformatics/btn431

By:

Antonina Andreeva;
Henning Tidow

Publication type:

Article

ProfDistS: (profile-) distance based phylogeny on sequence--structure alignments.

Published in:

Bioinformatics, 2008, v. 24, n. 20, p. 2401, doi. 10.1093/bioinformatics/btn453

By:

Matthias Wolf;
Benjamin Ruderisch;
Thomas Dandekar;
Jörg Schultz;
Tobias Müller

Publication type:

Article