Works matching IS 13674803 AND DT 2008 AND VI 24 AND IP 18

Results: 31

DrugViz: a Cytoscape plugin for visualizing and analyzing small molecule drugs in biological networks.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2117, doi. 10.1093/bioinformatics/btn389

By:

Bing Xiong;
Ke Liu;
Jie Wu;
David L. Burk;
Hualiang Jiang;
Jingkang Shen

Publication type:

Article

MetaRoute: fast search for relevant metabolic routes for interactive network navigation and visualization.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2108, doi. 10.1093/bioinformatics/btn360

By:

Torsten Blum;
Oliver Kohlbacher

Publication type:

Article

hapConstructor: automatic construction and testing of haplotypes in a Monte Carlo framework.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2105, doi. 10.1093/bioinformatics/btn359

By:

Ryan Abo;
Stacey Knight;
Jathine Wong;
Angela Cox;
Nicola J. Camp

Publication type:

Article

Dasty2, an Ajax protein DAS client.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2119, doi. 10.1093/bioinformatics/btn387

By:

Rafael C. Jimenez;
Antony F. Quinn;
Alexander Garcia;
Alberto Labarga;
Kieran ONeill;
Fernando Martinez;
Gustavo A. Salazar;
Henning Hermjakob

Publication type:

Article

ProCope--protein complex prediction and evaluation.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2115, doi. 10.1093/bioinformatics/btn376

By:

Jan Krumsiek;
Caroline C. Friedel;
Ralf Zimmer

Publication type:

Article

The CellML Model Repository.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2122, doi. 10.1093/bioinformatics/btn390

By:

Catherine M. Lloyd;
James R. Lawson;
Peter J. Hunter;
Poul F. Nielsen

Publication type:

Article

VistaClara: an expression browser plug-in for Cytoscape.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2112, doi. 10.1093/bioinformatics/btn368

By:

Robert Kincaid;
Allan Kuchinsky;
Michael Creech

Publication type:

Article

Modelling non-stationary gene regulatory processes with a non-homogeneous Bayesian network and the allocation sampler.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2071, doi. 10.1093/bioinformatics/btn367

By:

Marco Grzegorczyk;
Dirk Husmeier;
Kieron D. Edwards;
Peter Ghazal;
Andrew J. Millar

Publication type:

Article

Message-passing algorithms for the prediction of protein domain interactions from protein-protein interaction data.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2064, doi. 10.1093/bioinformatics/btn366

By:

Mudassar Iqbal;
Alex A. Freitas;
Colin G. Johnson;
Massimo Vergassola

Publication type:

Article

Apparently low reproducibility of true differential expression discoveries in microarray studies.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2057, doi. 10.1093/bioinformatics/btn365

By:

Min Zhang;
Chen Yao;
Zheng Guo;
Jinfeng Zou;
Lin Zhang;
Hui Xiao;
Dong Wang;
Da Yang;
Xue Gong;
Jing Zhu;
Yanhui Li;
Xia Li

Publication type:

Article

Phylocom: software for the analysis of phylogenetic community structure and trait evolution.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2098, doi. 10.1093/bioinformatics/btn358

By:

Campbell O. Webb;
David D. Ackerly;
Steven W. Kembel

Publication type:

Article

An integrated approach for automating validation of extracted ion chromatographic peaks.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2103, doi. 10.1093/bioinformatics/btn385

By:

William D. Nelson;
Kert Viele;
Bert C. Lynn

Publication type:

Article

Multi-dimensional classification of biomedical text: Toward automated, practical provision of high-utility text to diverse users.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2086, doi. 10.1093/bioinformatics/btn381

By:

Hagit Shatkay;
Fengxia Pan;
Andrey Rzhetsky;
W. John Wilbur

Publication type:

Article

Data-driven extraction of relative reasoning rules to limit combinatorial explosion in biodegradation pathway prediction.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2079, doi. 10.1093/bioinformatics/btn378

By:

Kathrin Fenner;
Junfeng Gao;
Stefan Kramer;
Lynda Ellis;
Larry Wackett

Publication type:

Article

BioJava: an open-source framework for bioinformatics.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2096, doi. 10.1093/bioinformatics/btn397

By:

R. C. G. Holland;
T. A. Down;
M. Pocock;
A. Prlic;
D. Huen;
K. James;
S. Foisy;
A. Dräger;
A. Yates;
M. Heuer;
M. J. Schreiber

Publication type:

Article

MetalDetector: a web server for predicting metal-binding sites and disulfide bridges in proteins from sequence.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2094, doi. 10.1093/bioinformatics/btn371

By:

Marco Lippi;
Andrea Passerini;
Marco Punta;
Burkhard Rost;
Paolo Frasconi

Publication type:

Article

HELIQUEST: a web server to screen sequences with specific {alpha}-helical properties.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2101, doi. 10.1093/bioinformatics/btn392

By:

Romain Gautier;
Dominique Douguet;
Bruno Antonny;
Guillaume Drin

Publication type:

Article

Metagenomics reveals our incomplete knowledge of global diversity.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2124, doi. 10.1093/bioinformatics/btn355

By:

Miguel Pignatelli;
Gabriel Aparicio;
Ignacio Blanquer;
Vicente Hernández;
Andrés Moya;
Javier Tamames

Publication type:

Article

Powerful fusion: PSI-BLAST and consensus sequences.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 1987, doi. 10.1093/bioinformatics/btn384

By:

Dariusz Przybylski;
Burkhard Rost

Publication type:

Article

Robust and efficient identification of biomarkers by classifying features on graphs.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2023, doi. 10.1093/bioinformatics/btn383

By:

TaeHyun Hwang;
Hugues Sicotte;
Ze Tian;
Baolin Wu;
Jean-Pierre Kocher;
Dennis A. Wigle;
Vipin Kumar;
Rui Kuang

Publication type:

Article

Development of a two-dimensional agent-based model for chronic chagasic cardiomyopathy after stem cell transplantation.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2051

By:

Viviane Galvão;
José Garcia Vivas Miranda;
Ricardo Ribeiro-dos-Santos

Publication type:

Article

Optimizing amino acid groupings for GPCR classification.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 1980, doi. 10.1093/bioinformatics/btn382

By:

Matthew N. Davies;
Andrew Secker;
Alex A. Freitas;
Edward Clark;
Jon Timmis;
Darren R. Flower

Publication type:

Article

Considering dependence among genes and markers for false discovery control in eQTL mapping.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2015, doi. 10.1093/bioinformatics/btn373

By:

Liang Chen;
Tiejun Tong;
Hongyu Zhao

Publication type:

Article

A knowledge-based approach to predict intragenic deletions or duplications.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 1975, doi. 10.1093/bioinformatics/btn370

By:

Krishna R. Kalari;
Thomas L. Casavant;
Todd E. Scheetz

Publication type:

Article

Enriched random forests.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2010, doi. 10.1093/bioinformatics/btn356

By:

Dhammika Amaratunga;
Javier Cabrera;
Yung-Seop Lee

Publication type:

Article

Accurate prediction of stability changes in protein mutants by combining machine learning with structure based computational mutagenesis.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2002, doi. 10.1093/bioinformatics/btn353

By:

Majid Masso;
Iosif I. Vaisman

Publication type:

Article

Integrating metabolic, transcriptional regulatory and signal transduction models in Escherichia coli.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2044, doi. 10.1093/bioinformatics/btn352

By:

Markus W. Covert;
Nan Xiao;
Tiffany J. Chen;
Jonathan R. Karr

Publication type:

Article

Bayesian survival analysis in genetic association studies.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2030, doi. 10.1093/bioinformatics/btn351

By:

Ioanna Tachmazidou;
Toby Andrew;
Claudio J. Verzilli;
Michael R. Johnson;
Maria De Iorio

Publication type:

Article

Dynamical modeling and multi-experiment fitting with PottersWheel.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2037, doi. 10.1093/bioinformatics/btn350

By:

Thomas Maiwald;
Jens Timmer

Publication type:

Article

FlexStem: improving predictions of RNA secondary structures with pseudoknots by reducing the search space.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 1994, doi. 10.1093/bioinformatics/btn327

By:

Xiang Chen;
Si-Min He;
Dongbo Bu;
Fa Zhang;
Zhiyong Wang;
Runsheng Chen;
Wen Gao

Publication type:

Article

The protein information and property explorer: an easy-to-use, rich-client web application for the management and functional analysis of proteomic data.

Published in:

Bioinformatics, 2008, v. 24, n. 18, p. 2110, doi. 10.1093/bioinformatics/btn363

By:

H. Ramos;
P. Shannon;
R. Aebersold

Publication type:

Article