Works matching IS 13674803 AND DT 2007 AND VI 23 AND IP 2

Results: 65

ECCB 2006 Organization.

Published in:: Bioinformatics, 2007, v. 23, n. 2, p. e3, doi. 10.1093/bioinformatics/btl651
Publication type:: Article

ECCB 2006.

Published in:: Bioinformatics, 2007, v. 23, n. 2, p. e1, doi. 10.1093/bioinformatics/btl631
Publication type:: Article

EDITORIAL.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 133

By:

Alfonso Valencia;
Alex Bateman

Publication type:

Article

A framework for gene expression analysis.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 191, doi. 10.1093/bioinformatics/btl591

By:

Andreas W. Schreiber

Publication type:

Article

QOMA: quasi-optimal multiple alignment of protein sequences.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 162

By:

Tamer Kahveci

Publication type:

Article

PrepMS: TOF MS data graphical preprocessing tool.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 264

By:

Yuliya V. Karpievitch;
Elizabeth G. Hill;
Adam J. Smolka;
Jeffrey S. Morris;
Kevin R. Coombes;
Keith A. Baggerly;
Jonas S. Almeida

Publication type:

Article

Striped Smith–Waterman speeds database searches six times over other SIMD implementations.

Published in:: Bioinformatics, 2007, v. 23, n. 2, p. 156, doi. 10.1093/bioinformatics/btl582
Publication type:: Article

Network neighborhood analysis with the multi-node topological overlap measure.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 222, doi. 10.1093/bioinformatics/btl581

By:

Ai Li;
Steve Horvath

Publication type:

Article

WHAP: haplotype-based association analysis.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 255, doi. 10.1093/bioinformatics/btl580

By:

Shaun Purcell;
Mark J. Daly;
Pak C. Sham

Publication type:

Article

Tree and rate estimation by local evaluation of heterochronous nucleotide data.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 169, doi. 10.1093/bioinformatics/btl577

By:

Zhu Yang;
John D. O'Brien

Publication type:

Article

CASPAR: a hierarchical Bayesian approach to predict survival times in cancer from gene expression data.

Published in:: Bioinformatics, 2007, v. 23, n. 2, p. 266, doi. 10.1093/bioinformatics/btl576
Publication type:: Article

CGI: a new approach for prioritizing genes by combining gene expression and protein–protein interaction data.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 215, doi. 10.1093/bioinformatics/btl569

By:

Xiaotu Ma;
Hyunju Lee

Publication type:

Article

PEAKS: identification of regulatory motifs by their position in DNA sequences.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 243, doi. 10.1093/bioinformatics/btl568

By:

Nicolás Bellora;
Domènec Farré;
M. Mar Albà

Publication type:

Article

Complementary intron sequence motifs associated with human exon repetition: a role for intragenic, inter-transcript interactions in gene expression.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 150, doi. 10.1093/bioinformatics/btl575

By:

Richard J. Dixon;
Ian C. Eperon;
Nilesh J. Samani

Publication type:

Article

Sungear: interactive visualization and functional analysis of genomic datasets.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 259, doi. 10.1093/bioinformatics/btl496

By:

Christopher S. Poultney;
Rodrigo A. Gutiérrez;
Manpreet S. Katari;
Miriam L. Gifford;
W. Bradford Paley;
Gloria M. Coruzzi;
Dennis E. Shasha

Publication type:

Article

LdCompare: rapid computation of single- and multiple-marker r2 and genetic coverage.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 252, doi. 10.1093/bioinformatics/btl574

By:

K. Hao

Publication type:

Article

Reliable prediction of Drosha processing sites improves microRNA gene prediction.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 142, doi. 10.1093/bioinformatics/btl570

By:

Snorre A. Helvik;
Ola Snøve;
Pål Sætrom

Publication type:

Article

Detecting protein dissimilarities in multiple alignments using Bayesian variable selection.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 245

By:

Jerry Tsai;
Ioannis Kagiampakis;
Patricia LiWang;
Marina Vannucci

Publication type:

Article

ProteomeCommons.org IO Framework: reading and writing multiple proteomics data formats.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 262, doi. 10.1093/bioinformatics/btl573

By:

J. A. Falkner

Publication type:

Article

Interpretation of ANOVA models for microarray data using PCA.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 184, doi. 10.1093/bioinformatics/btl572

By:

J. R. de Haan;
R. Wehrens;
S. Bauerschmidt;
E. Piek;
R. C. van Schaik;
L. M. C. Buydens

Publication type:

Article

SAGA: a subgraph matching tool for biological graphs.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 232, doi. 10.1093/bioinformatics/btl571

By:

Yuanyuan Tian;
Richard C. McEachin;
Carlos Santos;
David J. States;
Jignesh M. Patel

Publication type:

Article

Using GOstats to test gene lists for GO term association.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 257, doi. 10.1093/bioinformatics/btl567

By:

S. Falcon

Publication type:

Article

Difference detection in LC-MS data for protein biomarker discovery.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e198, doi. 10.1093/bioinformatics/btl326

By:

Jennifer Listgarten;
Radford M. Neal;
Sam T. Roweis;
Peter Wong;
Andrew Emili

Publication type:

Article

Prediction and simulation of motion in pairs of transmembrane α-helices.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e212, doi. 10.1093/bioinformatics/btl325

By:

Angela Enosh;
Sarel J. Fleishman;
Nir Ben-Tal;
Dan Halperin

Publication type:

Article

Using an alignment of fragment strings for comparing protein structures.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e219, doi. 10.1093/bioinformatics/btl310

By:

Iddo Friedberg;
Tim Harder

Publication type:

Article

GenoProfiler: batch processing of high-throughput capillary fingerprinting data.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 240, doi. 10.1093/bioinformatics/btl494

By:

Frank M. You;
Ming-Cheng Luo

Publication type:

Article

Predicting transcription factor affinities to DNA from a biophysical model.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 134

By:

Martin Vingron

Publication type:

Article

AGScan: a pluggable microarray image quantification software based on the ImageJ library.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 247

By:

F. Lopez;
Ch. Klopp

Publication type:

Article

In silico grouping of peptide/HLA class I complexes using structural interaction characteristics.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 177, doi. 10.1093/bioinformatics/btl563

By:

Joo Chuan Tong;
Tin Wee Tan;
Shoba Ranganathan

Publication type:

Article

Modular organization of protein interaction networks.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 207, doi. 10.1093/bioinformatics/btl562

By:

Feng Luo;
Yunfeng Yang;
Chin-Fu Chen;
Roger Chang;
Jizhong Zhou;
Richard H. Scheuermann

Publication type:

Article

Dependence network modeling for biomarker identification.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 198, doi. 10.1093/bioinformatics/btl553

By:

Peng Qiu;
Z. Jane Wang;
K. J. Ray Liu;
Zhang-Zhi Hu;
Cathy H. Wu

Publication type:

Article

KGraph: a system for visualizing and evaluating complex genetic associations.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. 249, doi. 10.1093/bioinformatics/btl510

By:

Reagan J. Kelly;
Douglas M. Jacobsen;
Yan V. Sun;
Jennifer A. Smith;
Sharon L. R. Kardia

Publication type:

Article

Identifying HLA supertypes by learning distance functions.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e148, doi. 10.1093/Bioinformatics/btl324

By:

Tomer Hertz;
Chen Yanover

Publication type:

Article

A tale of two tails: why are terminal residues of proteins exposed?

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e225

By:

Ron Unger

Publication type:

Article

Electrostatic potentials of proteins in water: a structured continuum approach.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e99, doi. 10.1093/bioinformatics/btl312

By:

Andreas Hildebrandt;
Ralf Blossey;
Sergej Rjasanow;
Oliver Kohlbacher;
Hans-Peter Lenhof

Publication type:

Article

Designing patterns for profile HMM search.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e36, doi. 10.1093/bioinformatics/btl323

By:

Yanni Sun

Publication type:

Article

A comparative genome approach to marker ordering.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e50, doi. 10.1093/bioinformatics/btl321

By:

T. Faraut;
S. de Givry

Publication type:

Article

Merging microarray cell synchronization experiments through curve alignment.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e64, doi. 10.1093/bioinformatics/btl320

By:

Filip Hermans;
Elena Tsiporkova

Publication type:

Article

Learning probabilistic models of cis-regulatory modules that represent logical and spatial aspects.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e156, doi. 10.1093/bioinformatics/btl319

By:

Keith Noto

Publication type:

Article

Tandem repeats over the edit distance.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e30, doi. 10.1093/bioinformatics/btl309

By:

Dina Sokol;
Gary Benson;
Justin Tojeira

Publication type:

Article

Genetic code symmetry and efficient design of GC-constrained coding sequences.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e57, doi. 10.1093/bioinformatics/btl317

By:

Matan Gavish;
Amnon Peled;
Benny Chor

Publication type:

Article

Optimization of probe coverage for high-resolution oligonucleotide aCGH.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e77, doi. 10.1093/bioinformatics/btl316

By:

Doron Lipson;
Zohar Yakhini;
Yonatan Aumann

Publication type:

Article

Discovering tightly regulated and differentially expressed gene sets in whole genome expression data.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e84

By:

Chun Ye;
Eleazar Eskin

Publication type:

Article

Family relationships: should consensus reign?—consensus clustering for protein families.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e71, doi. 10.1093/bioinformatics/btl314

By:

Macha Nikolski

Publication type:

Article

Efficient parsimony-based methods for phylogenetic network reconstruction.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e123, doi. 10.1093/bioinformatics/btl313

By:

Guohua Jin;
Luay Nakhleh;
Sagi Snir;
Tamir Tuller

Publication type:

Article

Similarities and differences of gene expression in yeast stress conditions.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e184, doi. 10.1093/bioinformatics/btl308

By:

Oleg Rokhlenko;
Ydo Wexler;
Zohar Yakhini

Publication type:

Article

Multiple alignment by sequence annealing.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e24, doi. 10.1093/bioinformatics/btl311

By:

Ariel S. Schwartz;
Lior Pachter

Publication type:

Article

Phylogenetic reconstruction from non-genomic data.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e110, doi. 10.1093/bioinformatics/btl307

By:

José C. Clemente;
Kenji Satou;
Gabriel Valiente

Publication type:

Article

Inferring phylogeny from whole genomes.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e116, doi. 10.1093/bioinformatics/btl296

By:

Paweł Górecki

Publication type:

Article

Efficient inference on known phylogenetic trees using Poisson regression.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e142, doi. 10.1093/bioinformatics/btl306

By:

Saharon Rosset

Publication type:

Article