Works matching IS 13674803 AND DT 2005 AND VI 21 AND IP 8

Results: 83

Erratum.

Published in:: Bioinformatics, 2005, v. 21, n. 8, p. 1750, doi. 10.1093/bioinformatics/bti395
Publication type:: Article

Improved prediction of protein–protein binding sites using a support vector machines approach.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1487

By:

David R. Westhead

Publication type:

Article

Architecture of basic building blocks in protein and domain structural interaction networks.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1479, doi. 10.1093/bioinformatics/bti240

By:

Hyun S. Moon;
Jonghwa Bhak;
Kwang H. Lee;
Doheon Lee

Publication type:

Article

Quantifying the relevance of different mediators in the human immune cell network.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1639, doi. 10.1093/bioinformatics/bti239

By:

P. Tieri;
S. Valensin;
V. Latora;
G. C. Castellani;
M. Marchiori;
D. Remondini;
C. Franceschi

Publication type:

Article

Quick and simple: quality control of microarray data.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1572, doi. 10.1093/bioinformatics/bti238

By:

Ursula Sauer

Publication type:

Article

An enhanced Java graph applet interface for visualizing interactomes.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1741, doi. 10.1093/bioinformatics/bti237

By:

Aaron N. Chang;
Jason McDermott;
Ram Samudrala

Publication type:

Article

GMD@CSB.DB: the Golm Metabolome Database.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1635, doi. 10.1093/bioinformatics/bti236

By:

Joachim Kopka;
Nicolas Schauer;
Stephan Krueger;
Claudia Birkemeyer;
Björn Usadel;
Eveline Bergmüller;
Peter Dörmann;
Wolfram Weckwerth;
Yves Gibon;
Mark Stitt;
Lothar Willmitzer;
Alisdair R. Fernie;
Dirk Steinhauser

Publication type:

Article

GPSDB: a new database for synonyms expansion of gene and protein names.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1743, doi. 10.1093/bioinformatics/bti235

By:

Violaine Pillet;
Marc Zehnder;
Alexander K. Seewald;
Anne-Lise Veuthey;
Johann Petrak

Publication type:

Article

A framework for scientific data modeling and automated software development.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1678, doi. 10.1093/bioinformatics/bti234

By:

Rasmus H. Fogh;
Wayne Boucher

Publication type:

Article

A structure-based method for protein sequence alignment.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1451

By:

Stephen H. Bryant

Publication type:

Article

PreDs: a server for predicting dsDNA-binding site on protein molecular surfaces.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1721, doi. 10.1093/bioinformatics/bti232

By:

Yuko Tsuchiya;
Kengo Kinoshita;
Haruki Nakamura

Publication type:

Article

Bloader—a batch loader application for MIAMExpress.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1727, doi. 10.1093/bioinformatics/bti231

By:

Christian Schwager

Publication type:

Article

Evaluation of HIV-1 kinetic models using quantitative discrimination analysis.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1668

By:

Ranjan Srivastava

Publication type:

Article

M-ZDOCK: a grid-based approach for Cn symmetric multimer docking.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1472, doi. 10.1093/bioinformatics/bti229

By:

Brian Pierce;
Weiwei Tong;
Zhiping Weng

Publication type:

Article

expa: a program for calculating extreme pathways in biochemical reaction networks.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1739

By:

Bernhard Ø. Palsson

Publication type:

Article

Structural drift: a possible path to protein fold change.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1308, doi. 10.1093/bioinformatics/bti227

By:

S. Sri Krishna;
Nick V. Grishin

Publication type:

Article

Dynamic network reconstruction from gene expression data applied to immune response during bacterial infection.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1626, doi. 10.1093/bioinformatics/bti226

By:

Reinhard Guthke;
Ulrich Möller;
Martin Hoffmann;
Frank Thies;
Susanne Töpfer

Publication type:

Article

Investigating the dynamic behavior of biochemical networks using model families.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1617

By:

Marc Daniel Haunschild;
Bernd Freisleben;
Ralf Takors;
Wolfgang Wiechert

Publication type:

Article

Dynamic simulation of protein complex formation on a genomic scale.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1610, doi. 10.1093/bioinformatics/bti223

By:

A. Beyer

Publication type:

Article

Carhta Gene: multipopulation integrated genetic and radiation hybrid mapping.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1703

By:

Thomas Schiex

Publication type:

Article

The WHy domain mediates the response to desiccation in plants and bacteria.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1304

By:

Francesca D. Ciccarelli

Publication type:

Article

Mapping SNPs to protein sequence and structure data.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1443

By:

A. C. R. Martin

Publication type:

Article

MultiPLX: automatic grouping and evaluation of PCR primers.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1701, doi. 10.1093/bioinformatics/bti219

By:

Lauris Kaplinski;
Reidar Andreson;
Tarmo Puurand;
Maido Remm

Publication type:

Article

DbW: automatic update of a functional family-specific multiple alignment.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1437, doi. 10.1093/bioinformatics/bti218

By:

V. Prigent

Publication type:

Article

Differential gene expression detection using penalized linear regression models: the improved SAM statistics.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1565

By:

Baolin Wu

Publication type:

Article

LS Bound based gene selection for DNA microarray data.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1559, doi. 10.1093/bioinformatics/bti216

By:

Xin Zhou;
K. Z. Mao

Publication type:

Article

Balancing protein similarity and gene co-expression reveals new links between genetic conservation and developmental diversity in invertebrates.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1550, doi. 10.1093/bioinformatics/bti215

By:

Céline Lefebvre;
Jean-Christophe Aude;
Eric Glémet;
Christian Néri

Publication type:

Article

Boolean relationships among genes responsive to ionizing radiation in the NCI 60 ACDS.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1542, doi. 10.1093/bioinformatics/bti214

By:

Ranadip Pal;
Aniruddha Datta;
Albert J. Fornace;
Michael L. Bittner;
Edward R. Dougherty

Publication type:

Article

Exploring the diversity of complex metabolic networks.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1603

By:

Vassily Hatzimanikatis;
Linda J. Broadbelt

Publication type:

Article

Implicit motif distribution based hybrid computational kernel for sequence classification.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1429, doi. 10.1093/bioinformatics/bti212

By:

Volkan Atalay;
Rengul Cetin-Atalay

Publication type:

Article

TargetFinder: a software for antisense oligonucleotide target site selection based on MAST and secondary structures of target mRNA.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1401

By:

Shengqi Wang

Publication type:

Article

Visualizing information across multidimensional post-genomic structured and textual databases.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1659

By:

Yves A. Lussier

Publication type:

Article

In silico fine-mapping: narrowing disease-associated loci by intergenomics.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1737, doi. 10.1093/bioinformatics/bti209

By:

Pablo Serrano-Fernández;
Saleh M. Ibrahim;
Dirk Koczan;
Uwe K. Zettl;
Steffen Möller

Publication type:

Article

GeneContent: software for whole-genome phylogenetic analysis.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1713

By:

Xun Gu;
Wei Huang;
Dongping Xu;
Hongmei Zhang

Publication type:

Article

LongSAGE analysis significantly improves genome annotation: identifications of novel genes and alternative transcripts in the mouse.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1393, doi. 10.1093/bioinformatics/bti207

By:

Matthias B. Wahl;
Ulrich Heinzmann;
Kenji Imai

Publication type:

Article

The G5 domain: a potential N-acetylglucosamine recognition domain involved in biofilm formation.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1301, doi. 10.1093/bioinformatics/bti206

By:

Alex Bateman

Publication type:

Article

LongSAGE analysis revealed the presence of a large number of novel antisense genes in the mouse genome.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1389, doi. 10.1093/bioinformatics/bti205

By:

Matthias B. Wahl;
Ulrich Heinzmann;
Kenji Imai

Publication type:

Article

Convergent evolution of domain architectures (is rare).

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1464, doi. 10.1093/bioinformatics/bti204

By:

Julian Gough

Publication type:

Article

Porter: a new, accurate server for protein secondary structure prediction.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1719, doi. 10.1093/bioinformatics/bti203

By:

Gianluca Pollastri;
Aoife McLysaght

Publication type:

Article

PatGen—a consolidated resource for searching genetic patent sequences.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1707, doi. 10.1093/bioinformatics/bti202

By:

Richard J. D. Rouse;
Jesus Castagnetto;
Roland H. Niedner

Publication type:

Article

CLUSTAG: hierarchical clustering and graph methods for selecting tag SNPs.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1735, doi. 10.1093/bioinformatics/bti201

By:

S. I. Ao;
Kevin Yip;
Michael Ng;
David Cheung;
Pui-Yee Fong;
Ian Melhado;
Pak C. Sham

Publication type:

Article

Support vector machines for separation of mixed plant–pathogen EST collections based on codon usage.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1383, doi. 10.1093/bioinformatics/bti200

By:

Caroline C. Friedel;
Katharina H. V. Jahn

Publication type:

Article

OLIN: optimized normalization, visualization and quality testing of two-channel microarray data.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1724, doi. 10.1093/bioinformatics/bti199

By:

Matthias E. Futschik;
Toni Crompton

Publication type:

Article

Statistical evaluation and comparison of a pairwise alignment algorithm that a priori assigns the number of gaps rather than employing gap penalties.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1421

By:

Matthew Bellgard

Publication type:

Article

Characterizing the dynamic connectivity between genes by variable parameter regression and Kalman filtering based on temporal gene expression data.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1538

By:

Tianzi Jiang

Publication type:

Article

Highly specific and accurate selection of siRNAs for high-throughput functional assays.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1376

By:

Joaquín Dopazo

Publication type:

Article

RBT—a tool for building refined Buneman trees.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1711, doi. 10.1093/bioinformatics/bti195

By:

Søren Besenbacher

Publication type:

Article

HESAS: HERVs Expression and Structure Analysis System.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1699, doi. 10.1093/bioinformatics/bti194

By:

Tae-Hyung Kim;
Yeo-Jin Jeon;
Woo-Yeon Kim;
Heui-Soo Kim

Publication type:

Article

A score matrix to reveal the hidden links in glycans.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1457

By:

Hiroshi Mamitsuka

Publication type:

Article

HykGene: a hybrid approach for selecting marker genes for phenotype classification using microarray gene expression data.

Published in:

Bioinformatics, 2005, v. 21, n. 8, p. 1530, doi. 10.1093/bioinformatics/bti192

By:

Yuhang Wang;
Fillia S. Makedon;
James C. Ford;
Justin Pearlman

Publication type:

Article