Works matching IS 13674803 AND DT 2005 AND VI 21

Results: 949

Erratum.

Published in:: Bioinformatics, 2005, v. 21, n. 24, p. 4435, doi. 10.1093/bioinformatics/bti777
Publication type:: Article

Beware of mis-assembled genomes.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4320, doi. 10.1093/bioinformatics/bti769

By:

Steven L. Salzberg;
James A. Yorke

Publication type:

Article

An update from the Bioinformatics Editors.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4319, doi. 10.1093/bioinformatics/bti768

By:

Alex Bateman;
Alfonso Valencia

Publication type:

Article

Erratum.

Published in:: Bioinformatics, 2005, v. 21, n. 24, p. 4434, doi. 10.1093/bioinformatics/bti758
Publication type:: Article

mILD: a tool for constructing and analyzing matrices of pairwise phylogenetic character incongruence tests.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4423, doi. 10.1093/bioinformatics/bti744

By:

Paul J. Planet;
Indra Neil Sarkar

Publication type:

Article

Haplotype-based linkage disequilibrium mapping via direct data mining.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4384

By:

Jing Li;
Tao Jiang

Publication type:

Article

Integrated minimum-set primers and unique probe design algorithms for differential detection on symptom-related pathogens.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4330, doi. 10.1093/bioinformatics/bti730

By:

Yu-Cheng Huang;
Chun-Fan Chang

Publication type:

Article

ISER: selection of differentially expressed genes from DNA array data by non-linear data transformations and local fitting.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4427, doi. 10.1093/bioinformatics/bti729

By:

R. D. Drummond;
A. Pinheiro;
C. S. Rocha;
M. Menossi

Publication type:

Article

Microarray phenotyping in Dictyostelium reveals a regulon of chemotaxis genes.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4371, doi. 10.1093/bioinformatics/bti726

By:

Ezgi O. Booth;
Nancy Van Driessche;
Olga Zhuchenko;
Adam Kuspa;
Gad Shaulsky

Publication type:

Article

GSMA: software implementation of the genome search meta-analysis method.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4430, doi. 10.1093/bioinformatics/bti725

By:

Fabio Pardi;
Douglas F. Levinson;
Cathryn M. Lewis

Publication type:

Article

Regularized ROC method for disease classification and biomarker selection with microarray data.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4356

By:

Shuangge Ma;
Jian Huang

Publication type:

Article

Differential coexpression analysis using microarray data and its application to human cancer.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4348, doi. 10.1093/bioinformatics/bti722

By:

Jung Kyoon Choi;
Ungsik Yu;
Ook Joon Yoo;
Sangsoo Kim

Publication type:

Article

Prediction of proteinprotein interactions using random decision forest framework.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4394, doi. 10.1093/bioinformatics/bti721

By:

Xue-Wen Chen;
Mei Liu

Publication type:

Article

ConFind: a robust tool for conserved sequence identification.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4420, doi. 10.1093/bioinformatics/bti719

By:

James A. Smagala;
Erica D. Dawson;
Martin Mehlmann;
Michael B. Townsend;
Robert D. Kuchta;
Kathy L. Rowlen

Publication type:

Article

Representations of molecular pathways: an evaluation of SBML, PSI MI and BioPAX.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4401

By:

Lena Strmbck;
Patrick Lambrix

Publication type:

Article

Effect of pooling samples on the efficiency of comparative studies using microarrays.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4378, doi. 10.1093/bioinformatics/bti717

By:

Shu-Dong Zhang;
Timothy W. Gant

Publication type:

Article

A novel strategy to design highly specific PCR primers based on the stability and uniqueness of 3'-end subsequences.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4363, doi. 10.1093/bioinformatics/bti716

By:

Fumihito Miura;
Chihiro Uematsu;
Yoshiyuki Sakaki;
Takashi Ito

Publication type:

Article

Improving disulfide connectivity prediction with sequential distance between oxidized cysteines.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4416, doi. 10.1093/bioinformatics/bti715

By:

Chi-Hung Tsai;
Bo-Juen Chen;
Chen-hsiung Chan;
Hsuan-Liang Liu;
Cheng-Yan Kao

Publication type:

Article

Athena: a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4411, doi. 10.1093/bioinformatics/bti714

By:

Timothy R. O'Connor;
Curtis Dyreson;
John J. Wyrick

Publication type:

Article

Improving the efficiency of SPR moves in phylogenetic tree search methods based on maximum likelihood.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4338, doi. 10.1093/bioinformatics/bti713

By:

Wim Hordijk;
Olivier Gascuel

Publication type:

Article

QUASARscoring and ranking of sequencestructure alignments.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4425, doi. 10.1093/bioinformatics/bti712

By:

Fabian Birzele;
Jan E. Gewehr

Publication type:

Article

Suffix-tree analyser (STAN): looking for nucleotidic and peptidic patterns in chromosomes.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4408, doi. 10.1093/bioinformatics/bti710

By:

Jacques Nicolas;
Patrick Durand;
Grgory Ranchy;
Sbastien Tempel;
Anne-Sophie Valin

Publication type:

Article

Evaluating and improving cDNA sequence quality with cQC.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4414, doi. 10.1093/bioinformatics/bti709

By:

Celine A. Hayden;
Travis J. Wheeler;
Richard A. Jorgensen

Publication type:

Article

Large-scale prokaryotic gene prediction and comparison to genome annotation.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4322, doi. 10.1093/bioinformatics/bti701

By:

Pernille Nielsen;
Anders Krogh

Publication type:

Article

Medusa: a simple tool for interaction graph analysis.

Published in:

Bioinformatics, 2005, v. 21, n. 24, p. 4432, doi. 10.1093/bioinformatics/bti696

By:

Sean D. Hooper;
Peer Bork

Publication type:

Article

Erratum.

Published in:: Bioinformatics, 2005, v. 21, n. 23, p. 4318, doi. 10.1093/bioinformatics/bti735
Publication type:: Article

Erratum.

Published in:: Bioinformatics, 2005, v. 21, n. 23, p. 4317, doi. 10.1093/bioinformatics/bti734
Publication type:: Article

Syntons, metabolons and interactons: an exact graph-theoretical approach for exploring neighbourhood between genomic and functional data.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4209, doi. 10.1093/bioinformatics/bti711

By:

Frédéric Boyer;
Anne Morgat;
Laurent Labarre;
Joël Pothier;
Alain Viari

Publication type:

Article

The influence of missing value imputation on detection of differentially expressed genes from microarray data.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4272, doi. 10.1093/bioinformatics/bti708

By:

Ida Scheel;
Magne Aldrin;
Ingrid K. Glad;
Ragnhild Sørum;
Heidi Lyng;
Arnoldo Frigessi

Publication type:

Article

Discovering hidden viral piracy.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4216, doi. 10.1093/bioinformatics/bti706

By:

Eddo Kim;
Yossef Kliger

Publication type:

Article

GARSA: genomic analysis resources for sequence annotation.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4302, doi. 10.1093/bioinformatics/bti705

By:

Alberto M. R. Dávila;
Daniel M. Lorenzini;
Pablo N. Mendes;
Thiago S. Satake;
Gabriel R. Sousa;
Linair M. Campos;
Camila J. Mazzoni;
Glauber Wagner;
Paulo F. Pires;
Edmundo C. Grisard;
Maria C. R. Cavalcanti;
Maria Luiza M. Campos

Publication type:

Article

ATID: a web-oriented database for collection of publicly available alternative translational initiation events.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4312, doi. 10.1093/bioinformatics/bti704

By:

Jun Cai

Publication type:

Article

Improved approach for proteochemometrics modeling: application to organic compound—amine G protein-coupled receptor interactions.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4289

By:

Jarl E. S. Wikberg

Publication type:

Article

Pcons5: combining consensus, structural evaluation and fold recognition scores.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4248, doi. 10.1093/bioinformatics/bti702

By:

Björn Wallner

Publication type:

Article

An attempt to define allergen-specific molecular surface features: a bioinformatic approach.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4201, doi. 10.1093/bioinformatics/bti700

By:

Ruta Furmonaviciene;
Brian J. Sutton;
Fabian Glaser;
Charlie A. Laughton;
Nick Jones;
Herb F. Sewell;
Farouk Shakib

Publication type:

Article

Sample size determination for the false discovery rate.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4263, doi. 10.1093/bioinformatics/bti699

By:

Stan Pounds

Publication type:

Article

OxfordGrid: a web interface for pairwise comparative map views.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4307

By:

Alan R. Gingle

Publication type:

Article

Discrimination of outer membrane proteins using support vector machines.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4223, doi. 10.1093/bioinformatics/bti697

By:

Keun-Joon Park;
M. Michael Gromiha;
Paul Horton;
Makiko Suwa

Publication type:

Article

Do you do text?

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4199, doi. 10.1093/bioinformatics/bti695

By:

Christian Blaschke;
Alexander Yeh;
Evelyn Camon;
Marc Colosimo;
Rolf Apweiler;
Lynette Hirschman;
Alfonso Valencia

Publication type:

Article

Mapping PDB chains to UniProtKB entries.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4297, doi. 10.1093/bioinformatics/bti694

By:

Andrew C. R. Martin

Publication type:

Article

MACiE: a database of enzyme reaction mechanisms.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4315, doi. 10.1093/bioinformatics/bti693

By:

Gemma L. Holliday;
Gail J. Bartlett;
Daniel E. Almonacid;
Noel M. O'Boyle;
Peter Murray-Rust;
Janet M. Thornton;
John B. O. Mitchell

Publication type:

Article

CREDO: a web-based tool for computational detection of conserved sequence motifs in noncoding sequences.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4304

By:

Klaus F. X. Mayer

Publication type:

Article

Bioinformatics analyses of circular dichroism protein reference databases.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4230, doi. 10.1093/bioinformatics/bti690

By:

Robert W. Janes

Publication type:

Article

HapSim: a simulation tool for generating haplotype data with pre-specified allele frequencies and LD coefficients.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4309, doi. 10.1093/bioinformatics/bti689

By:

Giovanni Montana

Publication type:

Article

Interactome-transcriptome analysis reveals the high centrality of genes differentially expressed in lung cancer tissues.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4205, doi. 10.1093/bioinformatics/bti688

By:

Shinichiro Wachi

Publication type:

Article

Profile-based direct kernels for remote homology detection and fold recognition.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4239

By:

George Karypis

Publication type:

Article

A note on using permutation-based false discovery rate estimates to compare different analysis methods for microarray data.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4280, doi. 10.1093/bioinformatics/bti685

By:

Yang Xie;
Wei Pan;
Arkady B. Khodursky

Publication type:

Article

Noise and rank-dependent geometrical filter improves sensitivity of highly specific discovery by microarrays.

Published in:

Bioinformatics, 2005, v. 21, n. 23, p. 4255, doi. 10.1093/bioinformatics/bti684

By:

Hassan M. Fathallah-Shaykh

Publication type:

Article

Erratum.

Published in:: Bioinformatics, 2005, v. 21, n. 22, p. 4198, doi. 10.1093/bioinformatics/bti727
Publication type:: Article

The Bioinformatics Open Access option.

Published in:

Bioinformatics, 2005, v. 21, n. 22, p. 4071, doi. 10.1093/bioinformatics/bti707

By:

Claire Saxby

Publication type:

Article