Works matching IS 13674803 AND DT 2004 AND VI 20 AND IP suppl_1

Results: 53

The cell graphs of cancer.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i145, doi. 10.1093/bioinformatics/bth933

By:

Gunduz, Cigdem;
Yener, Bülent;
Gultekin, S. Humayun

Publication type:

Article

Author Index.

Published in:: Bioinformatics, 2004, v. 20, n. suppl_1, p. i394, doi. 10.1093/bioinformatics/bth952
Publication type:: Article

Filling gaps in a metabolic network using expression information.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i178, doi. 10.1093/bioinformatics/bth930

By:

Kharchenko, Peter;
Vitkup, Dennis;
Church, George M.

Publication type:

Article

ISMB/ECCB 2004.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i1, doi. 10.1093/bioinformatics/bth950

By:

Thornton, Janet;
Gilbert, David;
Brooksbank, Cath

Publication type:

Article

Into the heart of darkness: large-scale clustering of human non-coding DNA.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i40, doi. 10.1093/bioinformatics/bth946

By:

Bejerano, Gill;
Haussler, David;
Blanchette, Mathieu

Publication type:

Article

Predicting gene regulation by sigma factors in Bacillus subtilis from genome-wide data.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i101, doi. 10.1093/bioinformatics/bth927

By:

de Hoon, M. J. L.;
Makita, Y.;
Imoto, S.;
Kobayashi, K.;
Ogasawara, N.;
Nakai, K.;
Miyano, S.

Publication type:

Article

Exploiting conserved structure for faster annotation of non-coding RNAs without loss of accuracy.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i334, doi. 10.1093/bioinformatics/bth925

By:

Weinberg, Zasha;
Ruzzo, Walter L.

Publication type:

Article

HyBrow: a prototype system for computer-aided hypothesis evaluation.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i257, doi. 10.1093/bioinformatics/bth905

By:

Racunas, S. A.;
Shah, N. H.;
Albert, I.;
Fedoroff, N. V.

Publication type:

Article

Filtering erroneous protein annotation.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i342, doi. 10.1093/bioinformatics/bth938

By:

Wieser, D.;
Kretschmann, E.;
Apweiler, R.

Publication type:

Article

Finding disease specific alterations in the co-expression of genes.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i194, doi. 10.1093/bioinformatics/bth909

By:

Kostka, Dennis;
Spang, Rainer

Publication type:

Article

Deconvolving cell cycle expression data with complementary information.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i23, doi. 10.1093/bioinformatics/bth915

By:

Bar-Joseph, Ziv;
Farkash, Shlomit;
Gifford, David K.;
Simon, Itamar;
Rosenfeld, Roni

Publication type:

Article

Mining MEDLINE for implicit links between dietary substances and diseases.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i290, doi. 10.1093/bioinformatics/bth914

By:

Srinivasan, Padmini;
Libbus, Bisharah

Publication type:

Article

Using MoBIoS' scalable genome join to find conserved primer pair candidates between two genomes.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i355

By:

Xu, Weijia;
Briggs, Willard J.;
Padolina, Joanna;
Timme, Ruth E.;
Liu, Wenguo;
Linder, C. Randal;
Miranker, Daniel P.

Publication type:

Article

Predicting protein–peptide interactions via a network-based motif sampler.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i274, doi. 10.1093/bioinformatics/bth922

By:

Reiss, David J.;
Schwikowski, Benno

Publication type:

Article

ISMB/ECCB 2004 Organization.

Published in:: Bioinformatics, 2004, v. 20, n. suppl_1, p. i3, doi. 10.1093/bioinformatics/bth951
Publication type:: Article

Optimal robust non-unique probe selection using Integer Linear Programming.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i186, doi. 10.1093/bioinformatics/bth936

By:

Klau, Gunnar W.;
Rahmann, Sven;
Schliep, Alexander;
Vingron, Martin;
Reinert, Knut

Publication type:

Article

Mining frequent patterns in protein structures: a study of protease families.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i77, doi. 10.1093/bioinformatics/bth912

By:

Chen, Shann-Ching;
Bahar, Ivet

Publication type:

Article

A two-stage classifier for identification of protein–protein interface residues.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i371, doi. 10.1093/bioinformatics/bth920

By:

Yan, Changhui;
Dobbs, Drena;
Honavar, Vasant

Publication type:

Article

Prediction of class I T-cell epitopes: evidence of presence of immunological hot spots inside antigens.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i297, doi. 10.1093/bioinformatics/bth943

By:

Srinivasan, K.N.;
Zhang, G.L.;
Khan, A.M.;
August, J.T.;
Brusic, V.

Publication type:

Article

Splice site identification by idlBNs.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i69, doi. 10.1093/bioinformatics/bth932

By:

Castelo, Robert;
Guigó, Roderic

Publication type:

Article

Analysis of domain correlations in yeast protein complexes.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i55, doi. 10.1093/bioinformatics/bth903

By:

Betel, Doron;
Isserlin, Ruth;
Hogue, Christopher W. V.

Publication type:

Article

Improved techniques for the identification of pseudogenes.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i94, doi. 10.1093/bioinformatics/bth942

By:

Coin, L.;
Durbin, R.

Publication type:

Article

A knowledge based approach for representing and reasoning about signaling networks.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i15, doi. 10.1093/bioinformatics/bth918

By:

Baral, C.;
Chancellor, K.;
Tran, N.;
Tran, N.L.;
Joy, A.;
Berens, M.

Publication type:

Article

TraitMap: an XML-based genetic-map database combining multigenic loci and biomolecular networks.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i152, doi. 10.1093/bioinformatics/bth940

By:

Heida, Naohiko;
Hasegawa, Yoshikazu;
Mochizuki, Yoshiki;
Hirosawa, Katsura;
Konagaya, Akihiko;
Toyoda, Tetsuro

Publication type:

Article

Reconstructing phylogeny by Quadratically Approximated Maximum Likelihood.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i348, doi. 10.1093/bioinformatics/bth926

By:

Woodhams, M. D.;
Hendy, M. D.

Publication type:

Article

High density linkage disequilibrium mapping using models of haplotype block variation.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i137, doi. 10.1093/bioinformatics/bth907

By:

Greenspan, G.;
Geiger, D.

Publication type:

Article

Partial Cox regression analysis for high-dimensional microarray gene expression data.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i208

By:

Li, Hongzhe;
Gui, Jiang

Publication type:

Article

Automatic Quality Assessment of Peptide Tandem Mass Spectra.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i49, doi. 10.1093/bioinformatics/bth947

By:

Bern, Marshall;
Goldberg, David;
McDonald, W. Hayes;
Yates, John R.

Publication type:

Article

Genomic features in the breakpoint regions between syntenic blocks.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i318, doi. 10.1093/bioinformatics/bth934

By:

Trinh, Phil;
McLysaght, Aoife;
Sankoff, David

Publication type:

Article

An efficient algorithm for detecting frequent subgraphs in biological networks.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i200, doi. 10.1093/bioinformatics/bth919

By:

Koyutürk, Mehmet;
Grama, Ananth;
Szpankowski, Wojciech

Publication type:

Article

A neural-network-based method for predicting protein stability changes upon single point mutations.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i63, doi. 10.1093/bioinformatics/bth928

By:

Capriotti, Emidio;
Fariselli, Piero;
Casadio, Rita

Publication type:

Article

Phylogenomics and the number of characters required for obtaining an accurate phylogeny of eukaryote model species.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i116, doi. 10.1093/bioinformatics/bth902

By:

Dopazo, Hernán;
Santoyo, Javier;
Dopazo, Joaquín

Publication type:

Article

Learning kernels from biological networks by maximizing entropy.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i326, doi. 10.1093/bioinformatics/bth906

By:

Tsuda, Koji;
Noble, William Stafford

Publication type:

Article

Statistical modeling of sequencing errors in SAGE libraries.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i31

By:

Beißbarth, Tim;
Hyde, Lavinia;
Smyth, Gordon K.;
Job, Chris;
Boon, Wee-Ming;
Tan, Seong-Seng;
Scott, Hamish S.;
Speed, Terence P.

Publication type:

Article

IMGT/JunctionAnalysis: the first tool for the analysis of the immunoglobulin and T cell receptor complex V–J and V–D–J JUNCTIONs.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i379, doi. 10.1093/bioinformatics/bth945

By:

Monod, Mehdi Yousfi;
Giudicelli, Véronique;
Chaume, Denys;
Lefranc, Marie-Paule

Publication type:

Article

Robust inference of groups in gene expression time-courses using mixtures of HMMs.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i283, doi. 10.1093/bioinformatics/bth937

By:

Schliep, Alexander;
Steinhoff, Christine;
Schönhuth, Alexander

Publication type:

Article

Predicting protein folding pathways.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i386, doi. 10.1093/bioinformatics/bth935

By:

Zaki, Mohammed J.;
Nadimpally, Vinay;
Bardhan, Deb;
Bystroff, Chris

Publication type:

Article

Striped sheets and protein contact prediction.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i224, doi. 10.1093/bioinformatics/bth913

By:

MacCallum, Robert M.

Publication type:

Article

The Gene Ontology Categorizer.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i169, doi. 10.1093/bioinformatics/bth921

By:

Joslyn, Cliff A.;
Mniszewski, Susan M.;
Fulmer, Andy;
Heaton, Gary

Publication type:

Article

Exploring Williams–Beuren syndrome using myGrid.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i303, doi. 10.1093/bioinformatics/bth944

By:

Stevens, R. D.;
Tipney, H. J.;
Wroe, C. J.;
Oinn, T. M.;
Senger, M.;
Lord, P. W.;
Goble, C. A.;
Brass, A.;
Tassabehji, M.

Publication type:

Article

Inferring quantitative models of regulatory networks from expression data.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i248, doi. 10.1093/bioinformatics/bth941

By:

Nachman, I.;
Regev, A.;
Friedman, N.

Publication type:

Article

Tracking repeats using significance and transitivity.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i311, doi. 10.1093/bioinformatics/bth911

By:

Szklarczyk, Radek;
Heringa, Jaap

Publication type:

Article

Protein names precisely peeled off free text.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i241, doi. 10.1093/bioinformatics/bth904

By:

Mika, Sven;
Rost, Burkhard

Publication type:

Article

Assigning transmembrane segments to helices in intermediate-resolution structures.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i122, doi. 10.1093/bioinformatics/bth939

By:

Enosh, Angela;
Fleishman, Sarel J.;
Ben-Tal, Nir;
Halperin, Dan

Publication type:

Article

Application of a new probabilistic model for recognizing complex patterns in glycans.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i6, doi. 10.1093/bioinformatics/bth916

By:

Aoki, Kiyoko F.;
Ueda, Nobuhisa;
Yamaguchi, Atsuko;
Kanehisa, Minoru;
Akutsu, Tatsuya;
Mamitsuka, Hiroshi

Publication type:

Article

Efficient approximations for learning phylogenetic HMM models from data.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i161, doi. 10.1093/bioinformatics/bth917

By:

Jojic, Vladimir;
Jojic, Nebojsa;
Meek, Chris;
Geiger, Dan;
Siepel, Adam;
Haussler, David;
Heckerman, D.

Publication type:

Article

Functional inference from non-random distributions of conserved predicted transcription factor binding sites.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i109, doi. 10.1093/bioinformatics/bth908

By:

Dieterich, Christoph;
Rahmann, Sven;
Vingron, Martin

Publication type:

Article

Selecting biomedical data sources according to user preferences.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i86, doi. 10.1093/bioinformatics/bth949

By:

Boulakia, Sarah Cohen;
Lair, Séverine;
Stransky, Nicolas;
Graziani, Stéphane;
Radvanyi, François;
Barillot, Emmanuel;
Froidevaux, Christine

Publication type:

Article

Predicting genetic regulatory response using classification.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i232, doi. 10.1093/bioinformatics/bth923

By:

Middendorf, Manuel;
Kundaje, Anshul;
Wiggins, Chris;
Freund, Yoav;
Leslie, Christina

Publication type:

Article

SCOPEC: a database of protein catalytic domains.

Published in:

Bioinformatics, 2004, v. 20, n. suppl_1, p. i130, doi. 10.1093/bioinformatics/bth948

By:

George, Richard A.;
Spriggs, Ruth V.;
Thornton, Janet M.;
Al-Lazikani, Bissan;
Swindells, Mark B.

Publication type:

Article