Works matching IS 13674803 AND DT 2004 AND VI 20 AND IP 3

Results: 24

Gene specific siRNA selector.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 430, doi. 10.1093/bioinformatics/btg437

By:

Natasha Levenkova;
Qingjuan Gu;
John J. Rux

Publication type:

Article

SEPON, a Selection and Evaluation Pipeline for OligoNucleotides based on ESTs with a non-target Tm algorithm for reducing cross-hybridization in microarray gene expression experiments.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 428, doi. 10.1093/bioinformatics/btg434

By:

Henrik Hornshøj;
Henrik Stengaard;
Frank Panitz;
Christian Bendixen

Publication type:

Article

The Jalview Java alignment editor.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 426, doi. 10.1093/bioinformatics/btg430

By:

Michele Clamp;
James Cuff;
Stephen M. Searle;
Geoffrey J. Barton

Publication type:

Article

Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 407, doi. 10.1093/bioinformatics/btg427

By:

Gautam Altekar;
Sandhya Dwarkadas;
John P. Huelsenbeck;
Fredrik Ronquist

Publication type:

Article

PIVOT: Protein Interacions VisualizatiOn Tool.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 424, doi. 10.1093/bioinformatics/btg426

By:

Nir Orlev;
Ron Shamir;
Yosef Shiloh

Publication type:

Article

Metrics for comparing regulatory sequences on the basis of pattern counts.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 399, doi. 10.1093/bioinformatics/btg425

By:

Jacques van Helden

Publication type:

Article

SVM based method for predicting HLA-DRB1*0401 binding peptides in an antigen sequence.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 421, doi. 10.1093/bioinformatics/btg424

By:

Manoj Bhasin;
G. P. S. Raghava

Publication type:

Article

Predicting protein secondary structure by cascade-correlation neural networks.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 419, doi. 10.1093/bioinformatics/btg423

By:

Matthew J. Wood;
Jonathan D. Hirst

Publication type:

Article

LDDist: a Perl module for calculating LogDet pair-wise distances for protein and nucleotide sequences.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 416, doi. 10.1093/bioinformatics/btg422

By:

Mikael Thollesson

Publication type:

Article

Knowledge discovery by automated identification and ranking of implicit relationships.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 389, doi. 10.1093/bioinformatics/btg421

By:

Jonathan D. Wren;
Raffi Bekeredjian;
Jelena A. Stewart;
Ralph V. Shohet;
Harold R. Garner

Publication type:

Article

A graph-theoretic modeling on GO space for biological interpretation of gene clusters.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 381, doi. 10.1093/bioinformatics/btg420

By:

Sung Geun Lee;
Jung Uk Hur;
Yang Seok Kim

Publication type:

Article

Is cross-validation valid for small-sample microarray classification?

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 374, doi. 10.1093/bioinformatics/btg419

By:

Ulisses M. Braga-Neto;
Edward R. Dougherty

Publication type:

Article

Non-parametric, hypothesis-based analysis of microarrays for comparison of several phenotypes.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 364, doi. 10.1093/bioinformatics/btg418

By:

Jeanne Kowalski;
Charles Drake;
Ronald H. Schwartz;
Jonathan Powell

Publication type:

Article

Advanced significance analysis of microarray data based on weighted resampling: a comparative study and application to gene deletions in Mycobacterium bovis.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 357, doi. 10.1093/bioinformatics/btg417

By:

Zoltan Kutalik;
Jacqueline Inwald;
Steve V. Gordon;
R. Glyn Hewinson;
Philip Butcher;
Jason Hinds;
Kwang-Hyun Cho;
Olaf Wolkenhauer

Publication type:

Article

An ontology for collaborative construction and analysis of cellular pathways.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 349, doi. 10.1093/bioinformatics/btg416

By:

E. Demir;
O. Babur;
U. Dogrusoz;
A. Gursoy;
A. Ayaz;
G. Gulesir;
G. Nisanci;
R. Cetin-Atalay

Publication type:

Article

Functional topology in a network of protein interactions.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 340, doi. 10.1093/bioinformatics/btg415

By:

N. Pržulj;
D.A. Wigle;
I. Jurisica

Publication type:

Article

Model-based methods for identifying periodically expressed genes based on time course microarray gene expression data.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 332, doi. 10.1093/bioinformatics/btg413

By:

Y. Luan;
H. Li

Publication type:

Article

A benchmark for Affymetrix GeneChip expression measures.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 323, doi. 10.1093/bioinformatics/btg410

By:

Leslie M. Cope;
Rafael A. Irizarry;
Harris A. Jaffee;
Zhijin Wu;
Terence P. Speed

Publication type:

Article

Hybrid simulation of cellular behavior.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 316, doi. 10.1093/bioinformatics/btg409

By:

Thomas R. Kiehl;
Robert M. Mattheyses;
Melvin K. Simmons

Publication type:

Article

affy—analysis of Affymetrix GeneChip data at the probe level.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 307, doi. 10.1093/bioinformatics/btg405

By:

Laurent Gautier;
Leslie Cope;
Benjamin M. Bolstad;
Rafael A. Irizarry

Publication type:

Article

Frequency Finder: a multi-source web application for collection of public allele frequencies of SNP markers.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 439, doi. 10.1093/bioinformatics/btg446

By:

Tu H. Nguyen;
Chunyu Liu;
Elliot S. Gershon;
Francis J. McMahon

Publication type:

Article

HIVbase: a PC/Windows-based software offering storage and querying power for locally held HIV-1 genetic, experimental and clinical data.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 436, doi. 10.1093/bioinformatics/btg445

By:

Susanna Lamers;
Scott Beason;
Luke Dunlap;
Robert Compton;
Marco Salemi

Publication type:

Article

VisCoSe: visualization and comparison of consensus sequences.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 433, doi. 10.1093/bioinformatics/btg444

By:

Michael Spitzer;
Georg Fuellen;
Paul Cullen;
Stefan Lorkowski

Publication type:

Article

Pseudo-periodic partitions of biological sequences.

Published in:

Bioinformatics, 2004, v. 20, n. 3, p. 295

By:

Lugang Li;
Renchao Jin

Publication type:

Article