Works matching IS 13674803 AND DT 2002 AND VI 18

Results: 363

The GeneAround GO viewer.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1705, doi. 10.1093/bioinformatics/18.12.1705

By:

Tanoue, Junko;
Yoshikawa, Masatoshi;
Uemura, Shunsuke

Publication type:

Article

OWEN: aligning long collinear regions of genomes.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1703, doi. 10.1093/bioinformatics/18.12.1703

By:

Ogurtsov, Aleksey Y.;
Roytberg, Mikhail A.;
Shabalina, Svetlana A.;
Kondrashov, Alexey S.

Publication type:

Article

PoPMuSiC, rationally designing point mutations in protein structures.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1701, doi. 10.1093/bioinformatics/18.12.1701

By:

Kwasigroch, J. M.;
Gilis, D.;
Dehouck, Y.;
Rooman, M.

Publication type:

Article

ADME-AP: a database of ADME associated proteins.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1699, doi. 10.1093/bioinformatics/18.12.1699

By:

Sun, L. Z.;
Ji, Z. L.;
Chen, X.;
Wang, J. F.;
Chen, Y. Z.

Publication type:

Article

DNACompress: fast and effective DNA sequence compression.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1696, doi. 10.1093/bioinformatics/18.12.1696

By:

Xin Chen;
Ming Li;
Bin Ma;
Tromp, John

Publication type:

Article

GENECOUNTING: haplotype analysis with missing genotypes.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1694, doi. 10.1093/bioinformatics/18.12.1694

By:

Zhao, Jing Hua;
Lissarrague, Sebastien;
Essioux, Laurent;
Sham, Pak Chung

Publication type:

Article

RED: the analysis, management and dissemination of expressed sequence tags.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1692, doi. 10.1093/bioinformatics/18.12.1692

By:

Everitt, R.;
Minnema, S. E.;
Wride, M. A.;
Koster, C. S.;
Hance, J. E.;
Mansergh, F. C.;
Rancourt, D. E.

Publication type:

Article

Design of endonuclease restriction sites into primers for PCR cloning.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1690, doi. 10.1093/bioinformatics/18.12.1690

By:

Hou, Jianghui

Publication type:

Article

PCR designer for restriction analysis of various types of sequence mutation.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1688

By:

Xiayi Ke;
Collins, Andrew;
Shu Ye

Publication type:

Article

Oligodb--interactive design of oligo DNA for ranscription profiling of human genes.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1686, doi. 10.1093/bioinformatics/18.12.1686

By:

Mrowka, Ralf;
Schuchhardt, Johannes;
Gille, Christoph

Publication type:

Article

SNPper: retrieval and analysis of human SNPs.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1681, doi. 10.1093/bioinformatics/18.12.1681

By:

Riva, A.;
Kohane, I. S.

Publication type:

Article

A hierarchical approach to aligning collinear regions of genomes.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1673, doi. 10.1093/bioinformatics/18.12.1673

By:

Roytberg, Mikhail A.;
Ogurtsov, Aleksey Y.;
Shabalina, Svetlana A.;
Kondrashov, Alexey S.

Publication type:

Article

PFDB: a generic protein family database integrating the CATH domain structure database with sequence based protein family resources.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1666, doi. 10.1093/bioinformatics/18.12.1666

By:

Shepherd, Adrian J.;
Martin, Nigel J.;
Johnson, Roger G.;
Kellam, Paul;
Orengo, Christine A.

Publication type:

Article

Structure--dependent sequence alignment for remotely related proteins.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1658, doi. 10.1093/bioinformatics/18.12.1658

By:

Yang, An-Suei

Publication type:

Article

Local structure-based sequence profile database for local and global protein structure predictions.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1650, doi. 10.1093/bioinformatics/18.12.1650

By:

Yang, An-Suei;
Wang, Lu-yong

Publication type:

Article

Modeling the percolation of annotation errors in a database of protein sequences.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1641, doi. 10.1093/bioinformatics/18.12.1641

By:

Gilks, Walter R.;
Audit, Benjamin;
De Angelis, Daniela;
Tsoka, Sophia;
Ouzounis, Christos A.

Publication type:

Article

Statistical analysis of high-density oligonucleotide arrays: a multiplicative noise model.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1633, doi. 10.1093/bioinformatics/18.12.1633

By:

Šášik, R.;
Calvo, E.;
Corbeil, J.

Publication type:

Article

Partial least squares proportional hazard regression for application to DNA microarray survival data.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1625, doi. 10.1093/bioinformatics/18.12.1625

By:

Nguyen, Danh V.;
Rocke, David M.

Publication type:

Article

A decomposition model to track gene expression signatures: preview on observer-independent classification of ovarian cancer.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1617, doi. 10.1093/bioinformatics/18.12.1617

By:

Martoglio, Ann-Marie;
Miskin, James W.;
Smith, Stephen K.;
MacKay, David J. C.

Publication type:

Article

Calculation of the minimum number of replicate spots required for detection of significant gene expression fold change in microarray experiments.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1609, doi. 10.1093/bioinformatics/18.12.1609

By:

Black, Michael A.;
Doerge, R. W.

Publication type:

Article

Between-group analysis of microarray data.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1600, doi. 10.1093/bioinformatics/18.12.1600

By:

Culhane, Aedín C.;
Perrière, Guy;
Considine, Elizabeth C.;
Cotter, Thomas G.;
Higgins, Desmond G.

Publication type:

Article

Analysis of high density expression microarrays with signed-rank call algorithms.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1593, doi. 10.1093/bioinformatics/18.12.1593

By:

Liu, W.-m.;
Mei, R.;
Di, X.;
Ryder, T. B.;
Hubbell, E.;
Webster, S. Dee T. A.;
Harrington, C. A.;
Ho, M.-h.;
Baid, J.;
Smeekens, S. P.

Publication type:

Article

Robust estimators for expression analysis.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1585, doi. 10.1093/bioinformatics/18.12.1585

By:

Hubbell, Earl;
Liu, Wei-Min;
Mei, Rui

Publication type:

Article

Comparing expression profiles of genes with similar promoter regions.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1576, doi. 10.1093/bioinformatics/18.12.1576

By:

Park, Peter J.;
Butte, Atul J.;
Kohane, Isaac S.

Publication type:

Article

Computational antisense oligo prediction with a neural network model.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1567, doi. 10.1093/bioinformatics/18.12.1567

By:

Chalk, Alistair M.;
Sonnhammer, Erik L. L.

Publication type:

Article

The presence of signal peptide significantly affects transmembrane topology prediction.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1562, doi. 10.1093/bioinformatics/18.12.1562

By:

Lao, Demelo M.;
Arai, Masafumi;
Ikeda, Masami;
Shimizu, Toshio

Publication type:

Article

Accomplishments and challenges in literature data mining for biology.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1553, doi. 10.1093/bioinformatics/18.12.1553

By:

Hirschman, Lynette;
Park, Jong C.;
Tsujii, Junichi;
Wong, Limsoon;
Wu, Cathy H.

Publication type:

Article

Editorial.

Published in:

Bioinformatics, 2002, v. 18, n. 12, p. 1551

By:

Valencia, Alfonso

Publication type:

Article

Ramachandran plot on the web†This work is dedicated to Late Professor G. N. Ramachandran.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1548, doi. 10.1093/bioinformatics/18.11.1548

By:

Sheik, S.S.;
Sundararajan, P.;
Hussain, A.S.Z.;
Sekar, K.

Publication type:

Article

QuickTree: building huge Neighbour-Joining trees of protein sequences.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1546, doi. 10.1093/bioinformatics/18.11.1546

By:

Howe, Kevin;
Bateman, Alex;
Durbin, Richard

Publication type:

Article

Poxvirus Orthologous Clusters (POCs).

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1544, doi. 10.1093/bioinformatics/18.11.1544

By:

Ehlers, Angelika;
Osborne, John;
Slack, Stephanie;
Roper, Rachel L.;
Upton, Chris

Publication type:

Article

GeneCards™ 2002: towards a complete, object-oriented, human gene compendium.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1542, doi. 10.1093/bioinformatics/18.11.1542

By:

Safran, Marilyn;
Solomon, Irina;
Shmueli, Orit;
Lapidot, Michal;
Shen-Orr, Shai;
Adato, Avital;
Ben-Dor, Uri;
Esterman, Nir;
Rosen, Naomi;
Peter, Inga;
Olender, Tsviya;
Chalifa-Caspi, Vered;
Lancet, Doron

Publication type:

Article

SNOMAD (Standardization and NOrmalization of MicroArray Data): web-accessible gene expression data analysis.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1540, doi. 10.1093/bioinformatics/18.11.1540

By:

Colantuoni, Carlo;
Henry, George;
Zeger, Scott;
Pevsner, Jonathan

Publication type:

Article

AcePrimer: automation of PCR primer design based on gene structure.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1538, doi. 10.1093/bioinformatics/18.11.1538

By:

McKay, Sheldon J.;
Jones, Steven J.M.

Publication type:

Article

A motif of a microbial starch-binding domain found in human genethonin.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1534, doi. 10.1093/bioinformatics/18.11.1534

By:

Janeček, Štefan

Publication type:

Article

Euclidian space and grouping of biological objects.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1523, doi. 10.1093/bioinformatics/18.11.1523

By:

Grishin, Vyacheslav N.;
Grishin, Nick V.

Publication type:

Article

Finding relevant references to genes and proteins in Medline using a Bayesian approach.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1515, doi. 10.1093/bioinformatics/18.11.1515

By:

Leonard, Julie E.;
Colombe, Jeffrey B.;
Levy, Joshua L.

Publication type:

Article

An evaluation of β-turn prediction methods.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1508, doi. 10.1093/bioinformatics/18.11.1508

By:

Kaur, Harpreet;
Raghava, G.P.S.

Publication type:

Article

Empirical determination of effective gap penalties for sequence comparison.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1500, doi. 10.1093/bioinformatics/18.11.1500

By:

Reese, J.T.;
Pearson, W.R.

Publication type:

Article

A simulated annealing algorithm for finding consensus sequences.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1494, doi. 10.1093/bioinformatics/18.11.1494

By:

Keith, Jonathan M.;
Adams, Peter;
Bryant, Darryn;
Kroese, Dirk P.;
Mitchelson, Keith R.;
Cochran, Duncan A.E.;
Lala, Gita H.

Publication type:

Article

A duplication growth model of gene expression networks.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1486, doi. 10.1093/bioinformatics/18.11.1486

By:

Bhan, Ashish;
Galas, David J.;
Dewey, T. Gregory

Publication type:

Article

Statistical analysis of a small set of time-ordered gene expression data using linear splines.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1477, doi. 10.1093/bioinformatics/18.11.1477

By:

de Hoon, M.J.L.;
Imoto, S.;
Miyano, S.

Publication type:

Article

Theoretical and experimental comparisons of gene expression indexes for oligonucleotide arrays.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1470, doi. 10.1093/bioinformatics/18.11.1470

By:

Lemon, William J.;
Palatini, Jeffrey J.T.;
Krahe, Ralf;
Wright, Fred A.

Publication type:

Article

Methods for assessing reproducibility of clustering patterns observed in analyses of microarray data.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1462, doi. 10.1093/bioinformatics/18.11.1462

By:

McShane, Lisa M.;
Radmacher, Michael D.;
Freidlin, Boris;
Yu, Ren;
Li, Ming-Chung;
Simon, Richard

Publication type:

Article

Nonparametric methods for identifying differentially expressed genes in microarray data.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1454, doi. 10.1093/bioinformatics/18.11.1454

By:

Troyanskaya, Olga G.;
Garber, Mitchell E.;
Brown, Patrick O.;
Botstein, David;
Altman, Russ B.

Publication type:

Article

Gene expression data analysis with a dynamically extended self-organized map that exploits class information.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1446, doi. 10.1093/bioinformatics/18.11.1446

By:

Mavroudi, Seferina;
Papadimitriou, Stergios;
Bezerianos, Anastasios

Publication type:

Article

Comparison of microarray designs for class comparison and class discovery.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1438, doi. 10.1093/bioinformatics/18.11.1438

By:

Dobbin, K.;
Simon, R.

Publication type:

Article

PRIMEGENS: robust and efficient design of gene-specific probes for microarray analysis.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1432

By:

Xu, Dong;
Li, Guangshan;
Wu, Liyou;
Zhou, Jizhong;
Xu, Ying

Publication type:

Article

MethPrimer: designing primers for methylation PCRs.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1427

By:

Li, Long-Cheng;
Dahiya, Rajvir

Publication type:

Article

Identification of mixups among DNA sequencing plates.

Published in:

Bioinformatics, 2002, v. 18, n. 11, p. 1418, doi. 10.1093/bioinformatics/18.11.1418

By:

Stojanovic, Nikola;
Chang, Jean L.;
Lehoczky, Jessica;
Zody, Michael C.;
Dewar, Ken

Publication type:

Article