Found: 30
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Clustering of temporal gene expression data with mixtures of mixed effects models with a penalized likelihood.
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- Bioinformatics, 2019, v. 35, n. 5, p. 778, doi. 10.1093/bioinformatics/bty696
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checkMyIndex: a web-based R/Shiny interface for choosing compatible sequencing indexes.
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- Bioinformatics, 2019, v. 35, n. 5, p. 901, doi. 10.1093/bioinformatics/bty706
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- Article
CharGer: clinical Characterization of Germline variants.
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- Bioinformatics, 2019, v. 35, n. 5, p. 865, doi. 10.1093/bioinformatics/bty649
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- Article
Batch effects correction for microbiome data with Dirichlet-multinomial regression.
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- Bioinformatics, 2019, v. 35, n. 5, p. 807, doi. 10.1093/bioinformatics/bty729
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- Article
C3D: a tool to predict 3D genomic interactions between cis-regulatory elements.
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- Bioinformatics, 2019, v. 35, n. 5, p. 877, doi. 10.1093/bioinformatics/bty717
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- Article
Benchmarking optimization methods for parameter estimation in large kinetic models.
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- Bioinformatics, 2019, v. 35, n. 5, p. 830, doi. 10.1093/bioinformatics/bty736
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- Article
StructureProfiler: an all-in-one tool for 3D protein structure profiling.
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- Bioinformatics, 2019, v. 35, n. 5, p. 874, doi. 10.1093/bioinformatics/bty692
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- Article
Cell membrane proteins with high N-glycosylation, high expression and multiple interaction partners are preferred by mammalian viruses as receptors.
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- Bioinformatics, 2019, v. 35, n. 5, p. 723, doi. 10.1093/bioinformatics/bty694
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- Article
SpaRC: scalable sequence clustering using Apache Spark.
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- Bioinformatics, 2019, v. 35, n. 5, p. 760, doi. 10.1093/bioinformatics/bty733
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- Article
SKmDB: an integrated database of next generation sequencing information in skeletal muscle.
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- Bioinformatics, 2019, v. 35, n. 5, p. 847, doi. 10.1093/bioinformatics/bty705
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- Article
quantitative map of protein sequence space for the cis-defensin superfamily.
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- Bioinformatics, 2019, v. 35, n. 5, p. 743, doi. 10.1093/bioinformatics/bty697
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- Article
QuantiNemo 2: a Swiss knife to simulate complex demographic and genetic scenarios, forward and backward in time.
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- Bioinformatics, 2019, v. 35, n. 5, p. 886, doi. 10.1093/bioinformatics/bty737
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- Article
PairedFB: a full hierarchical Bayesian model for paired RNA-seq data with heterogeneous treatment effects.
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- Bioinformatics, 2019, v. 35, n. 5, p. 787, doi. 10.1093/bioinformatics/bty731
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- Article
Phylo-PFP: improved automated protein function prediction using phylogenetic distance of distantly related sequences.
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- Bioinformatics, 2019, v. 35, n. 5, p. 753, doi. 10.1093/bioinformatics/bty704
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- Article
PathwayConnector: finding complementary pathways to enhance functional analysis.
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- Bioinformatics, 2019, v. 35, n. 5, p. 889, doi. 10.1093/bioinformatics/bty693
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- Article
PANDA: A comprehensive and flexible tool for quantitative proteomics data analysis.
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- Bioinformatics, 2019, v. 35, n. 5, p. 898, doi. 10.1093/bioinformatics/bty727
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- Article
Processing of big heterogeneous genomic datasets for tertiary analysis of Next Generation Sequencing data.
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- Bioinformatics, 2019, v. 35, n. 5, p. 729, doi. 10.1093/bioinformatics/bty688
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On entropy and information in gene interaction networks.
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- Bioinformatics, 2019, v. 35, n. 5, p. 815, doi. 10.1093/bioinformatics/bty691
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- Article
Increased sensitivity with automated validation of XL-MS cleavable peptide crosslinks.
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- Bioinformatics, 2019, v. 35, n. 5, p. 895, doi. 10.1093/bioinformatics/bty720
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- Article
MIPUP: minimum perfect unmixed phylogenies for multi-sampled tumors via branchings and ILP.
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- Bioinformatics, 2019, v. 35, n. 5, p. 769, doi. 10.1093/bioinformatics/bty683
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- Article
MCO: towards an ontology and unified vocabulary for a framework-based annotation of microbial growth conditions.
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- Bioinformatics, 2019, v. 35, n. 5, p. 856, doi. 10.1093/bioinformatics/bty689
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- Article
isiKnock: in silico knockouts in signaling pathways.
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- Bioinformatics, 2019, v. 35, n. 5, p. 892, doi. 10.1093/bioinformatics/bty700
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- Article
AncestryView: data-driven visualization of whole-genome local-ancestry.
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- Bioinformatics, 2019, v. 35, n. 5, p. 883, doi. 10.1093/bioinformatics/bty732
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- Article
DCARS: differential correlation across ranked samples.
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- Bioinformatics, 2019, v. 35, n. 5, p. 823, doi. 10.1093/bioinformatics/bty698
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- Article
Haplotype matching in large cohorts using the Li and Stephens model.
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- Bioinformatics, 2019, v. 35, n. 5, p. 798, doi. 10.1093/bioinformatics/bty735
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- Article
Genome Detective: an automated system for virus identification from high-throughput sequencing data.
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- Bioinformatics, 2019, v. 35, n. 5, p. 871, doi. 10.1093/bioinformatics/bty695
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- Article
gemBS: high throughput processing for DNA methylation data from bisulfite sequencing.
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- Bioinformatics, 2019, v. 35, n. 5, p. 737, doi. 10.1093/bioinformatics/bty690
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- Article
ImaGEO: integrative gene expression meta-analysis from GEO database.
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- Bioinformatics, 2019, v. 35, n. 5, p. 880, doi. 10.1093/bioinformatics/bty721
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- Article
VARAN-GIE: curation of genomic interval sets.
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- Bioinformatics, 2019, v. 35, n. 5, p. 868, doi. 10.1093/bioinformatics/bty723
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Container-based bioinformatics with Pachyderm.
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- Bioinformatics, 2019, v. 35, n. 5, p. 839, doi. 10.1093/bioinformatics/bty699
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- Article