Found: 31
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A novel hybrid gene prediction method employing protein multiple sequence alignments.
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- Bioinformatics, 2011, v. 27, n. 6, p. 757, doi. 10.1093/bioinformatics/btr010
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- Article
HTSanalyzeR: an R/Bioconductor package for integrated network analysis of high-throughput screens.
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- Bioinformatics, 2011, v. 27, n. 6, p. 879, doi. 10.1093/bioinformatics/btr028
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- Article
A method for identifying haplotypes carrying the causative allele in positive natural selection and genome-wide association studies.
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- Bioinformatics, 2011, v. 27, n. 6, p. 822, doi. 10.1093/bioinformatics/btr007
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- Article
OrthoNets: simultaneous visual analysis of orthologs and their interaction neighborhoods across different organisms.
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- Bioinformatics, 2011, v. 27, n. 6, p. 883, doi. 10.1093/bioinformatics/btr035
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- Article
SpaCEM3: a software for biological module detection when data is incomplete, high dimensional and dependent.
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- Bioinformatics, 2011, v. 27, n. 6, p. 881, doi. 10.1093/bioinformatics/btr034
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- Article
Computational inference of grammars for larger-than-gene structures from annotated gene sequences.
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- Bioinformatics, 2011, v. 27, n. 6, p. 791, doi. 10.1093/bioinformatics/btr036
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- Article
Bambino: a variant detector and alignment viewer for next-generation sequencing data in the SAM/BAM format.
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- Bioinformatics, 2011, v. 27, n. 6, p. 865, doi. 10.1093/bioinformatics/btr032
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- Article
Baking a mass-spectrometry data PIE with McMC and simulated annealing: predicting protein post-translational modifications from integrated top-down and bottom-up data.
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- Bioinformatics, 2011, v. 27, n. 6, p. 844, doi. 10.1093/bioinformatics/btr027
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- Article
Identity-by-descent filtering of exome sequence data for disease–gene identification in autosomal recessive disorders.
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- Bioinformatics, 2011, v. 27, n. 6, p. 829, doi. 10.1093/bioinformatics/btr022
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- Article
Biological assessment of robust noise models in microarray data analysis.
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- Bioinformatics, 2011, v. 27, n. 6, p. 807, doi. 10.1093/bioinformatics/btr018
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Graphics processing unit implementations of relative expression analysis algorithms enable dramatic computational speedup.
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- Bioinformatics, 2011, v. 27, n. 6, p. 872, doi. 10.1093/bioinformatics/btr033
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CNAmet: an R package for integrating copy number, methylation and expression data.
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- Bioinformatics, 2011, v. 27, n. 6, p. 887, doi. 10.1093/bioinformatics/btr019
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- Article
A k-mer scheme to predict piRNAs and characterize locust piRNAs.
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- Bioinformatics, 2011, v. 27, n. 6, p. 771, doi. 10.1093/bioinformatics/btr016
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- Article
A greedy, graph-based algorithm for the alignment of multiple homologous gene lists.
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- Bioinformatics, 2011, v. 27, n. 6, p. 749, doi. 10.1093/bioinformatics/btr008
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- Article
Computational refinement of post-translational modifications predicted from tandem mass spectrometry.
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- Bioinformatics, 2011, v. 27, n. 6, p. 797, doi. 10.1093/bioinformatics/btr017
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GPU accelerated biochemical network simulation.
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- Bioinformatics, 2011, v. 27, n. 6, p. 874, doi. 10.1093/bioinformatics/btr015
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- Article
PhyloPro: a web-based tool for the generation and visualization of phylogenetic profiles across Eukarya.
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- Bioinformatics, 2011, v. 27, n. 6, p. 877, doi. 10.1093/bioinformatics/btr023
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- Article
Quantitative trait prediction based on genetic marker-array data, a simulation study.
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- Bioinformatics, 2011, v. 27, n. 6, p. 745, doi. 10.1093/bioinformatics/btr024
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- Article
Dalliance: interactive genome viewing on the web.
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- Bioinformatics, 2011, v. 27, n. 6, p. 889, doi. 10.1093/bioinformatics/btr020
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- Article
A pipeline for RNA-seq data processing and quality assessment.
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- Bioinformatics, 2011, v. 27, n. 6, p. 867, doi. 10.1093/bioinformatics/btr012
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- Article
Efficient simulation under a population genetics model of carcinogenesis.
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- Bioinformatics, 2011, v. 27, n. 6, p. 837, doi. 10.1093/bioinformatics/btr025
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- Article
Improved side-chain modeling by coupling clash-detection guided iterative search with rotamer relaxation.
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- Bioinformatics, 2011, v. 27, n. 6, p. 785, doi. 10.1093/bioinformatics/btr009
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Automated validation of genetic variants from large databases: ensuring that variant references refer to the same genomic locations.
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- Bioinformatics, 2011, v. 27, n. 6, p. 891, doi. 10.1093/bioinformatics/btr029
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Compression of DNA sequence reads in FASTQ format.
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- Bioinformatics, 2011, v. 27, n. 6, p. 860, doi. 10.1093/bioinformatics/btr014
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- Article
The CCPN Metabolomics Project: a fast protocol for metabolite identification by 2D-NMR.
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- Bioinformatics, 2011, v. 27, n. 6, p. 885, doi. 10.1093/bioinformatics/btr013
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A fast, lock-free approach for efficient parallel counting of occurrences of k-mers.
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- Bioinformatics, 2011, v. 27, n. 6, p. 764
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Modular analysis of the probabilistic genetic interaction network.
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- Bioinformatics, 2011, v. 27, n. 6, p. 853, doi. 10.1093/bioinformatics/btr031
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- Article
High-accuracy prediction of bacterial type III secreted effectors based on position-specific amino acid composition profiles.
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- Bioinformatics, 2011, v. 27, n. 6, p. 777, doi. 10.1093/bioinformatics/btr021
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- Article
Identifying dispersed epigenomic domains from ChIP-Seq data.
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- Bioinformatics, 2011, v. 27, n. 6, p. 870, doi. 10.1093/bioinformatics/btr030
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Quality control and preprocessing of metagenomic datasets.
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- Bioinformatics, 2011, v. 27, n. 6, p. 863, doi. 10.1093/bioinformatics/btr026
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Robust linear regression methods in association studies.
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- Bioinformatics, 2011, v. 27, n. 6, p. 815
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- Article