Found: 29
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De novo transcriptome assembly with ABySS.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2872, doi. 10.1093/bioinformatics/btp367
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- Publication type:
- Article
Analyzing biological network parameters with CentiScaPe.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2857, doi. 10.1093/bioinformatics/btp517
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- Publication type:
- Article
The effects of probe binding affinity differences on gene expression measurements and how to deal with them.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2772, doi. 10.1093/bioinformatics/btp492
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- Publication type:
- Article
Correlating multiple SNPs and multiple disease phenotypes: penalized non-linear canonical correlation analysis.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2764, doi. 10.1093/bioinformatics/btp491
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- Publication type:
- Article
TagDust—a program to eliminate artifacts from next generation sequencing data.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2839, doi. 10.1093/bioinformatics/btp527
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- Publication type:
- Article
Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2865, doi. 10.1093/bioinformatics/btp394
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- Publication type:
- Article
A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2787, doi. 10.1093/bioinformatics/btp510
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- Publication type:
- Article
A hypergraph-based learning algorithm for classifying gene expression and arrayCGH data with prior knowledge.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2831, doi. 10.1093/bioinformatics/btp467
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- Publication type:
- Article
Quantifying cancer progression with conjunctive Bayesian networks.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2809, doi. 10.1093/bioinformatics/btp505
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- Publication type:
- Article
Bi-correlation clustering algorithm for determining a set of co-regulated genes.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2795, doi. 10.1093/bioinformatics/btp526
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- Publication type:
- Article
integrOmics: an R package to unravel relationships between two omics datasets.
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- Bioinformatics, 2009, v. 25, n. 21, p. 2855, doi. 10.1093/bioinformatics/btp515
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- Publication type:
- Article
ERNEST: a toolbox for chemical reaction network theory.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2853, doi. 10.1093/bioinformatics/btp513
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- Publication type:
- Article
Statistical methods for gene set co-expression analysis.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2780, doi. 10.1093/bioinformatics/btp502
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- Publication type:
- Article
WEbcoli: an interactive and asynchronous web application for in silico design and analysis of genome-scale E.coli model.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2850, doi. 10.1093/bioinformatics/btp496
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- Publication type:
- Article
COMPASS: a program for generating serial samples under an infinite sites model.
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- Bioinformatics, 2009, v. 25, n. 21, p. 2845, doi. 10.1093/bioinformatics/btp534
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- Publication type:
- Article
Algorithms for optimal protein structure alignment.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2751, doi. 10.1093/bioinformatics/btp530
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- Publication type:
- Article
Accessible methods for the dynamic time-scale decomposition of biochemical systems.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2816, doi. 10.1093/bioinformatics/btp451
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- Publication type:
- Article
Multiple testing in genome-wide association studies via hidden Markov models.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2802, doi. 10.1093/bioinformatics/btp476
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- Publication type:
- Article
Updates to the RMAP short-read mapping software.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2841, doi. 10.1093/bioinformatics/btp533
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- Publication type:
- Article
Increasing the coverage of a metapopulation consensus genome by iterative read mapping and assembly.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2878, doi. 10.1093/bioinformatics/btp377
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- Publication type:
- Article
Modified variational Bayes EM estimation of hidden Markov tree model of cell lineages.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2824, doi. 10.1093/bioinformatics/btp456
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- Publication type:
- Article
Automated inference of molecular mechanisms of disease from amino acid substitutions.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2744, doi. 10.1093/bioinformatics/btp528
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- Publication type:
- Article
PathBuilder—open source software for annotating and developing pathway resources.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2860, doi. 10.1093/bioinformatics/btp453
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- Publication type:
- Article
CCHMM_PROF: a HMM-based coiled-coil predictor with evolutionary information.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2757, doi. 10.1093/bioinformatics/btp539
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- Publication type:
- Article
Efficiently finding genome-wide three-way gene interactions from transcript- and genotype-data.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2735, doi. 10.1093/bioinformatics/btp531
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- Publication type:
- Article
iBioSim: a tool for the analysis and design of genetic circuits.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2848, doi. 10.1093/bioinformatics/btp457
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- Publication type:
- Article
A report on the 2009 SIG on short read sequencing and algorithms (Short-SIG).
- Published in:
- 2009
- By:
- Publication type:
- Proceeding
ISOLATE: a computational strategy for identifying the primary origin of cancers using high-throughput sequencing.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2882, doi. 10.1093/bioinformatics/btp378
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- Publication type:
- Article
3D-SURFER: software for high-throughput protein surface comparison and analysis.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2843, doi. 10.1093/bioinformatics/btp542
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- Publication type:
- Article