Found: 61
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Genome wide identification and classification of alternative splicing based on EST data.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2579, doi. 10.1093/bioinformatics/bth288
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RRE: a tool for the extraction of non-coding regions surrounding annotated genes from genomic datasets.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2848, doi. 10.1093/bioinformatics/bth287
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Command line tool for calculating theoretical MS spectra for given sequences.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2889, doi. 10.1093/bioinformatics/bth328
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GDPC: connecting researchers with multiple integrated data sources.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2839, doi. 10.1093/bioinformatics/bth277
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- Article
A statistical framework for the design of microarray experiments and effective detection of differential gene expression.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2821, doi. 10.1093/bioinformatics/bth336
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- Article
STAR: an algorithm to Search for Tandem Approximate Repeats.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2812, doi. 10.1093/bioinformatics/bth335
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Regulatory motif finding by logic regression.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2799, doi. 10.1093/bioinformatics/bth333
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Data mining techniques to study the disulfide-bonding state in proteins: signal peptide is a strong descriptor.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2509, doi. 10.1093/bioinformatics/bth332
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BacTregulators: a database of transcriptional regulators in bacteria and archaea.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2787, doi. 10.1093/bioinformatics/bth330
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Qxpak: a versatile mixed model application for genetical genomics and QTL analyses.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2792, doi. 10.1093/bioinformatics/bth331
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- Article
Faster cyclic loess: normalizing RNA arrays via linear models.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2778, doi. 10.1093/bioinformatics/bth327
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- Article
ICBS: a database of interactions between protein chains mediated by β-sheet formation.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2767, doi. 10.1093/bioinformatics/bth326
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- Article
PaVESy: Pathway Visualization and Editing System.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2841, doi. 10.1093/bioinformatics/bth278
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- Article
CoPS: Comprehensive Peptide Signature Database.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2886, doi. 10.1093/bioinformatics/bth325
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- Article
Mining gene expression data based on template theory.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2759, doi. 10.1093/bioinformatics/bth323
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- Article
A neural network method for prediction of β-turn types in proteins using evolutionary information.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2751, doi. 10.1093/bioinformatics/bth322
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GeneRecords: a relational database for GenBank flat file parsing and data manipulation in personal computers.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2883, doi. 10.1093/bioinformatics/bth321
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- Article
Prediction of similarly acting cis-regulatory modules by subsequence profiling and comparative genomics in Drosophila melanogaster and D.pseudoobscura.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2738, doi. 10.1093/bioinformatics/bth320
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- Article
The Global Error Assessment (GEA) model for the selection of differentially expressed genes in microarray data.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2726, doi. 10.1093/bioinformatics/bth319
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- Article
Transcription/replication collisions cause bacterial transcription units to be longer on the leading strand of replication.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2719, doi. 10.1093/bioinformatics/bth317
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FigSearch: a figure legend indexing and classification system.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2880, doi. 10.1093/bioinformatics/bth316
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- Article
TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2878, doi. 10.1093/bioinformatics/bth315
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Thermodynamics of enzyme-catalyzed reactions—a database for quantitative biochemistry.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2874, doi. 10.1093/bioinformatics/bth314
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Rainbow: a toolbox for phylogenetic supertree construction and analysis.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2872, doi. 10.1093/bioinformatics/bth313
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Mining gene expression data for positive and negative co-regulated gene clusters.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2711
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Exhaustive whole-genome tandem repeats search.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2702, doi. 10.1093/bioinformatics/bth311
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A mixture model for estimating the local false discovery rate in DNA microarray analysis.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2694, doi. 10.1093/bioinformatics/bth310
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Correcting log ratios for signal saturation in cDNA microarrays.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2685, doi. 10.1093/bioinformatics/bth309
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An efficient algorithm for optimizing whole genome alignment with noise.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2676, doi. 10.1093/bioinformatics/bth308
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ClutrFree: cluster tree visualization and interpretation.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2869, doi. 10.1093/bioinformatics/bth307
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DBRF–MEGN method: an algorithm for deducing minimum equivalent gene networks from large-scale gene expression profiles of gene deletion mutants.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2662, doi. 10.1093/bioinformatics/bth306
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SCA db: spinocerebellar ataxia candidate gene database.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2656, doi. 10.1093/bioinformatics/bth305
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Lucy2: an interactive DNA sequence quality trimming and vector removal tool.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2865
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SWAPSC: sliding window analysis procedure to detect selective constraints.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2867, doi. 10.1093/bioinformatics/bth303
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TargetDB: a target registration database for structural genomics projects.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2860, doi. 10.1093/bioinformatics/bth300
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Heterogeneity detector: finding heterogeneous positions in Phred/Phrap assemblies.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2863, doi. 10.1093/bioinformatics/bth301
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- Article
A collaborative database of inbred mouse strain characteristics.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2857, doi. 10.1093/bioinformatics/bth299
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Prokaryotic diversity of the Saccharomyces cerevisiae Atx1p-mediated copper pathway.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2644, doi. 10.1093/bioinformatics/bth298
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Eigenvalue analysis of amino acid substitution matrices reveals a sharp transition of the mode of sequence conservation in proteins.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2504, doi. 10.1093/bioinformatics/bth297
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ASIAN: a website for network inference.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2853, doi. 10.1093/bioinformatics/bth296
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THEA: ontology-driven analysis of microarray data.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2636, doi. 10.1093/bioinformatics/bth295
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A statistical framework for genomic data fusion.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2626, doi. 10.1093/bioinformatics/bth294
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GO-Mapper: functional analysis of gene expression data using the expression level as a score to evaluate Gene Ontology terms.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2618, doi. 10.1093/bioinformatics/bth293
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- Article
A dynamically growing self-organizing tree (DGSOT) for hierarchical clustering gene expression profiles.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2605, doi. 10.1093/bioinformatics/bth292
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Distribution of information in biomedical abstracts and full-text publications.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2597, doi. 10.1093/bioinformatics/bth291
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- Article
Incremental generation of summarized clustering hierarchy for protein family analysis.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2586, doi. 10.1093/bioinformatics/bth290
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Gene-Ontology-based clustering of gene expression data.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2851, doi. 10.1093/bioinformatics/bth289
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A mixture model-based strategy for selecting sets of genes in multiclass response microarray experiments.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2562, doi. 10.1093/bioinformatics/bth285
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Predicting allergenic proteins using wavelet transform.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2572
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The database of epoxide hydrolases and haloalkane dehalogenases: one structure, many functions.
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- Bioinformatics, 2004, v. 20, n. 16, p. 2845, doi. 10.1093/bioinformatics/bth284
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- Article