Works matching IS 1176-9343 AND IP 8 AND DT 2012

Results: 40

A Novel Multi-Scale Modeling Approach to Infer Whole Genome Divergence.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 611, doi. 10.4137/EBO.S10194

By:

Reuveni, Eli;
Giuliani, Alessandro

Publication type:

Article

Phylogenetic Analysis and Comparative Genomics of Purine Riboswitch Distribution in Prokaryotes.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 589, doi. 10.4137/EBO.S10048

By:

Singh, Payal;
Sengupta, Supratim

Publication type:

Article

Genome-Wide Survey of Ds Exonization to Enrich Transcriptomes and Proteomes in Plants.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 575, doi. 10.4137/EBO.S10324

By:

Li-yu Daisy Liu;
Yuh-Chyang Charng

Publication type:

Article

Translation Efficiency in Upstream Region of microRNA Targets in Arabidopsis thaliana.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 565, doi. 10.4137/EBO.S10362

By:

Wanjun Gu;
Chuanying Zhai;
Xiaofei Wang;
Xueying Xie;
Parinandi, Gurunadh;
Tong Zhou

Publication type:

Article

Phylogenomic Study of Lipid Genes Involved in Microalgal Biofuel Production—Candidate Gene Mining and Metabolic Pathway Analyses.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 545, doi. 10.4137/EBO.S10159

By:

Misra, Namrata;
Kumar Panda, Prasanna;
Kumar Parida, Bikram;
Kanta Mishra, Barada

Publication type:

Article

Evolution of Type II Antifreeze Protein Genes in Teleost Fish: A Complex Scenario Involving Lateral Gene Transfers and Episodic Directional Selection.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 535, doi. 10.4137/EBO.S9976

By:

Sorhannus, Ulf

Publication type:

Article

Cloud Computing for Comparative Genomics with Windows Azure Platform.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 527, doi. 10.4137/EBO.S9946

By:

Insik Kim;
Jae-Yoon Jung;
DeLuca, Todd F.;
Nelson, Tristan H.;
Wall, Dennis P.

Publication type:

Article

Meta-Analysis of General Bacterial Subclades in Whole-Genome Phylogenies Using Tree Topology Profiling.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 489, doi. 10.4137/EBO.S9642

By:

Meinel, Thomas;
Krause, Antje

Publication type:

Article

TreeCmp: Comparison of Trees in Polynomial Time.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 475, doi. 10.4137/EBO.S9657

By:

Bogdanowicz, Damian;
Giaro, Krzysztof;
Wróbel, Borys

Publication type:

Article

Efficiency of Nuclear and Mitochondrial Markers Recovering and Supporting Known Amniote Groups.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 463, doi. 10.4137/EBO.S9656

By:

Lambret-Frotté, Julia;
Araújo Perini, Fernando;
de Moraes Russo, Claudia Augusta

Publication type:

Article

Inference of Self-Regulated Transcriptional Networks by Comparative Genomics.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 449, doi. 10.4137/EBO.S9205

By:

Cornish, Joseph P.;
Matthews, Fialelei;
Thomas, Julien R.;
Erill, Ivan

Publication type:

Article

The Chordate Proteome History Database.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 437, doi. 10.4137/EBO.S9186

By:

Levasseur, Anthony;
Paganini, Julien;
Dainat, Jacques;
Thompson, Julie D.;
Poch, Olivier;
Pontarotti, Pierre;
Gouret, Philippe

Publication type:

Article

PhyloMarker—A Tool for Mining Phylogenetic Markers Through Genome Comparison: Application of the Mouse Lemur (Genus Microcebus) Phylogeny.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 423, doi. 10.4137/EBO.S9886

By:

Runhua Lei;
Rowley, Thaine W.;
Lifeng Zhu;
Bailey, Carolyn A.;
Engberg, Shannon E.;
Wood, Mindy L.;
Christman, Mary C.;
Perry, George H.;
Louis Jr., Edward E.;
Guoqing Lu

Publication type:

Article

Reliable Phylogenetic Trees Building: A New Web Interface for FIGENIX.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 417, doi. 10.4137/EBO.S9179

By:

Paganini, Julien;
Gouret, Philippe

Publication type:

Article

Determinants of Exon-Level Evolutionary Rates in Arabidopsis Species.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 389, doi. 10.4137/EBO.S9743

By:

Wu, Gideon C.-T.;
Feng-Chi Chen

Publication type:

Article

Phylogenomic and Domain Analysis of Iterative Polyketide Synthases in Aspergillus Species.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 373, doi. 10.4137/EBO.S9796

By:

Shu-Hsi Lin;
Miwa Yoshimoto;
Ping-Chiang Lyu;
Chuan-Yi Tang;
Arita, Masanori

Publication type:

Article

RY-Coding and Non-Homogeneous Models Can Ameliorate the Maximum-Likelihood Inferences From Nucleotide Sequence Data with Parallel Compositional Heterogeneity.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 357, doi. 10.4137/EBO.S9017

By:

Ishikawa, Sohta A.;
Inagaki, Yuji;
Hashimoto, Tetsuo

Publication type:

Article

AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 321, doi. 10.4137/EBO.S9369

By:

Rashid, Muhammad;
He Guangyuan;
Yang Guangxiao;
Javeed Hussain;
Yan Xu

Publication type:

Article

Transposon-Derived and Satellite-Derived Repetitive Sequences Play Distinct Functional Roles in Mammalian Intron Size Expansion.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 301, doi. 10.4137/EBO.S9758

By:

Dapeng Wang;
Yao Su;
Xumin Wang;
Hongxing Lei;
Jun Yu

Publication type:

Article

MiIP: The Monomer Identification and Isolation Program.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 293, doi. 10.4137/EBO.S9248

By:

Bun, Christopher;
Ziccardi, William;
Doering, Jeffrey;
Putonti, Catherine

Publication type:

Article

PhyloTempo: A Set of R Scripts for Assessing and Visualizing Temporal Clustering in Genealogies Inferred from Serially Sampled Viral Sequences.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 261, doi. 10.4137/EBO.S9738

By:

Norström, Melissa M.;
Prosperi, Mattia C. F.;
Gray, Rebecca R.;
Karlsson, Annika C.;
Salemi, Marco

Publication type:

Article

Evolution of the RALF Gene Family in Plants: Gene Duplication and Selection Patterns.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 271, doi. 10.4137/EBO.S9652

By:

Jun Cao;
Feng Shi

Publication type:

Article

Cross-Genome Clustering of Human and C. elegans G-Protein Coupled Receptors.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 229, doi. 10.4137/EBO.S9405

By:

Nagarathnam, Balasubramanian;
Kalaimathy, Singaravelu;
Balakrishnan, Veluchamy;
Sowdhamini, Ramanathan

Publication type:

Article

Mitochondrial Genetic Differentiation of Spirlin (Actinopterigii: Cyprinidae) in the South Caspian Sea basin of Iran.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 219, doi. 10.4137/EBO.S9207

By:

Seifali, Mahvash;
Arshad, Aziz;
Yazdani Moghaddam, Faezeh;
Esmaeili, Hamid Reza;
Kiabi, Bahram H.;
Khalijah Daud, Siti;
Aliabadian, Mansour

Publication type:

Article

Impact of the Partitioning Scheme on Divergence Times Inferred from Mammalian Genomic Data Sets.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 207, doi. 10.4137/EBO.S9627

By:

Voloch, Carolina M.;
Schrago, Carlos G.

Publication type:

Article

Efficient Feature Selection and Multiclass Classification with Integrated Instance and Model Based Learning.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 197, doi. 10.4137/EBO.S9407

By:

Zhenqiu Liu;
Bensmail, Halima;
Ming Tan

Publication type:

Article

Promoter Sequences Prediction Using Relational Association Rule Mining.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 181, doi. 10.4137/EBO.S9376

By:

Czibula, Gabriela;
Bocicor, Maria-Iuliana;
Gergely Czibula, Istvan

Publication type:

Article

A Lossy Compression Technique Enabling Duplication-Aware Sequence Alignment.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 171, doi. 10.4137/EBO.S9131

By:

Freschi, Valerio;
Bogliolo, Alessandro

Publication type:

Article

Selection of Marker Genes Using Whole-Genome DNA Polymorphism Analysis.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 161, doi. 10.4137/EBO.S8989

By:

Bohle, Harry M.;
Gabaldón, Toni

Publication type:

Article

easyPAC: A Tool for Fast Prediction, Testing and Reference Mapping of Degenerate PCR Primers from Alignments or Consensus Sequences.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 151, doi. 10.4137/EBO.S8870

By:

Rsenkranz, David

Publication type:

Article

Inferring the Phylogeny of Bovidae Using Mitochondrial DNA Sequences: Resolving Power of Individual Genes Relative to Complete Genomes.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 139, doi. 10.4137/EBO.S8897

By:

Arif, Ibrahim A.;
Bakir, Mohammad A.;
Khan, Haseeb A.

Publication type:

Article

Testing Synchrony in Historical Biogeography: The Case of New World Primates and Hystricognathi Rodents.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 127, doi. 10.4137/EBO.S9008

By:

Loss-Oliveira, Leticia;
Aguiar, Barbara O.;
Schrago, Carlos G.

Publication type:

Article

Construction of a Pig Physical Interactome Using Sequence Homology and a Comprehensive Reference Human Interactome.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 119, doi. 10.4137/EBO.S8552

By:

Dreher, Felix;
Kamburov, Atanas;
Herwig, Ralf

Publication type:

Article

Interkingdom Gene Transfer May Contribute to the Evolution of Phytopathogenicity in Botrytis Cinerea.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 105, doi. 10.4137/EBO.S8486

By:

Bo Zhu;
Qing Zhou;
Guanlin Xie;
Guoqing Zhang;
Xiaowei Zhang;
Yanli Wang;
Gunchang Sun;
Bin Li;
Gulei Jin

Publication type:

Article

Species Delimitation and Global Biosecurity.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 1, doi. 10.4137/EBO.S8532

By:

Boykin, Laura M.;
Armstrong, Karen F.;
Kubatko, Laura;
De Barro, Paul

Publication type:

Article

Evolutionary Genomics of Genes Involved in Olfactory Behavior in the Drosophila melanogaster Species Group.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 89, doi. 10.4137/EBO.S8484

By:

Lavagnino, Nicolás;
Serra, François;
Arbiza, Leonardo;
Dopazo, Hernán;
Hasson, Esteban

Publication type:

Article

EvoluCode: Evolutionary Barcodes as a Unifying Framework for Multilevel Evolutionary Data.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 61, doi. 10.4137/EBO.S8814

By:

Linard, Benjamin;
Ngoc Hoan Nguyen;
Prosdocimi, Francisco;
Poch, Olivier;
Thompson, Julie D.

Publication type:

Article

LCGbase: A Comprehensive Database for Lineage-Based Co-regulated Genes.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 39, doi. 10.4137/EBO.S8540

By:

Dapeng Wang;
Yubin Zhang;
Zhonghua Fan;
Guiming Liu;
Jun Yu

Publication type:

Article

SAFE Software and FED Database to Uncover Protein-Protein Interactions using Gene Fusion Analysis.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 47, doi. 10.4137/EBO.S8018

By:

Tsagrasoulis, Dimosthenis;
Danos, Vasilis;
Kissa, Maria;
Trimpalis, Philip;
Koumandou, V. Lila;
Karagouni, Amalia D.;
Tsakalidis, Athanasios;
Kossida, Sophia

Publication type:

Article

BS-KNN: An Effective Algorithm for Predicting Protein Subchloroplast Localization.

Published in:

Evolutionary Bioinformatics, 2012, n. 8, p. 79, doi. 10.4137/EBO.S8681

By:

Jing Hu;
Xianghe Yan

Publication type:

Article