Works matching IS 0999193X AND DT 2024 AND VI 56 AND IP 1

Results: 80

Sex identification in rainbow trout using genomic information and machine learning.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00944-0

By:

Kudinov, Andrei A.;
Kause, Antti

Publication type:

Article

Haplotype analysis incorporating ancestral origins identified novel genetic loci associated with chicken body weight using an advanced intercross line.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00946-y

By:

Bu, Lina;
Wang, Yuzhe;
Tan, Lizhi;
Wen, Zilong;
Hu, Xiaoxiang;
Zhang, Zhiwu;
Zhao, Yiqiang

Publication type:

Article

Population structure and breed identification of Chinese indigenous sheep breeds using whole genome SNPs and InDels.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00927-1

By:

Zhao, Chang-heng;
Wang, Dan;
Yang, Cheng;
Chen, Yan;
Teng, Jun;
Zhang, Xin-yi;
Cao, Zhi;
Wei, Xian-ming;
Ning, Chao;
Yang, Qi-en;
Lv, Wen-fa;
Zhang, Qin

Publication type:

Article

Predicted breeding values for relative scrapie susceptibility for genotyped and ungenotyped sheep.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00947-x

By:

Eiríksson, Jón H.;
Þórarinsdóttir, Þórdís;
Gautason, Egill

Publication type:

Article

Equivalence of variance components between standard and recursive genetic models using LDL′ transformations.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00901-x

By:

Varona, Luis;
López-Carbonell, David;
Srihi, Houssemeddine;
Hervás-Rivero, Carlos;
González-Recio, Óscar;
Altarriba, Juan

Publication type:

Article

Redefining and interpreting genomic relationships of metafounders.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00891-w

By:

Legarra, Andres;
Bermann, Matias;
Mei, Quanshun;
Christensen, Ole F.

Publication type:

Article

Genetic parameters and genotype-by-environment interaction estimates for growth and feed efficiency related traits in Chinook salmon, Oncorhynchus tshawytscha, reared under low and moderate flow regimes.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00929-z

By:

Prescott, Leteisha A.;
Scholtens, Megan R.;
Walker, Seumas P.;
Clarke, Shannon M.;
Dodds, Ken G.;
Miller, Matthew R.;
Semmens, Jayson M.;
Carter, Chris G.;
Symonds, Jane E.

Publication type:

Article

Changes in allele frequencies and genetic architecture due to selection in two pig populations.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00941-3

By:

Wientjes, Yvonne C. J.;
Peeters, Katrijn;
Bijma, Piter;
Huisman, Abe E.;
Calus, Mario P. L.

Publication type:

Article

On the inverse association between the number of QTL and the trait-specific genomic relationship of a candidate to the training set.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00940-4

By:

Stricker, Christian;
Fernando, Rohan L.;
Melchinger, Albrecht;
Auinger, Hans-Juergen;
Schoen, Chris-Carolin

Publication type:

Article

Segregation GWAS to linearize a non-additive locus with incomplete penetrance: an example of horn status in sheep.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00928-0

By:

Duijvesteijn, Naomi;
van der Werf, Julius H. J.;
Kinghorn, Brian P.

Publication type:

Article

On the ability of the LR method to detect bias when there is pedigree misspecification and lack of connectedness.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00943-1

By:

Pardo, Alan M.;
Legarra, Andres;
Vitezica, Zulma G.;
Forneris, Natalia S.;
Maizon, Daniel O.;
Munilla, Sebastián

Publication type:

Article

A computationally efficient algorithm to leverage average information REML for (co)variance component estimation in the genomic era.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00939-x

By:

Strandén, Ismo;
Mäntysaari, Esa A.;
Lidauer, Martin H.;
Thompson, Robin;
Gao, Hongding

Publication type:

Article

Empirical versus estimated accuracy of imputation: optimising filtering thresholds for sequence imputation.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00942-2

By:

Nguyen, Tuan V.;
Bolormaa, Sunduimijid;
Reich, Coralie M.;
Chamberlain, Amanda J.;
Vander Jagt, Christy J.;
Daetwyler, Hans D.;
MacLeod, Iona M.

Publication type:

Article

The effect of phenotyping, adult selection, and mating strategies on genetic gain and rate of inbreeding in black soldier fly breeding programs.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00938-y

By:

Slagboom, Margot;
Nielsen, Hanne Marie;
Kargo, Morten;
Henryon, Mark;
Hansen, Laura Skrubbeltrang

Publication type:

Article

Investigating genotype by environment interaction for beef cattle fertility traits in commercial herds in northern Australia with multi-trait analysis.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00936-0

By:

Copley, James P.;
Hayes, Benjamin J.;
Ross, Elizabeth M.;
Speight, Shannon;
Fordyce, Geoffry;
Wood, Benjamin J.;
Engle, Bailey N.

Publication type:

Article

Estimating genomic relationships of metafounders across and within breeds using maximum likelihood, pseudo-expectation–maximization maximum likelihood and increase of relationships.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00892-9

By:

Legarra, Andres;
Bermann, Matias;
Mei, Quanshun;
Christensen, Ole F.

Publication type:

Article

QTL analysis to identify genes involved in the trade-off between silk protein synthesis and larva-pupa transition in silkworms.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00937-z

By:

Gao, Rui;
Li, Chunlin;
Zhou, Ang;
Wang, Xiachao;
Lu, Kupeng;
Zuo, Weidong;
Hu, Hai;
Han, Minjin;
Tong, Xiaoling;
Dai, Fangyin

Publication type:

Article

Identification of genomic regions associated with fatty acid metabolism across blood, liver, backfat and muscle in pigs.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00933-3

By:

Liu, Junhui;
Sebastià, Cristina;
Jové-Juncà, Teodor;
Quintanilla, Raquel;
González-Rodríguez, Olga;
Passols, Magí;
Castelló, Anna;
Sánchez, Armand;
Ballester, Maria;
Folch, Josep M.

Publication type:

Article

Combined genomic evaluation of Merino and Dohne Merino Australian sheep populations.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00934-2

By:

Wicki, Marine;
Brown, Daniel J.;
Gurman, Phillip M.;
Raoul, Jérôme;
Legarra, Andrés;
Swan, Andrew A.

Publication type:

Article

A million-cow genome-wide association study of productive life in U.S. Holstein cows.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00935-1

By:

Liang, Zuoxiang;
Prakapenka, Dzianis;
Zaabza, Hafedh B.;
VanRaden, Paul M.;
Van Tassell, Curtis P.;
Da, Yang

Publication type:

Article

A comprehensive atlas of nuclear sequences of mitochondrial origin (NUMT) inserted into the pig genome.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00930-6

By:

Bolner, Matteo;
Bovo, Samuele;
Ballan, Mohamad;
Schiavo, Giuseppina;
Taurisano, Valeria;
Ribani, Anisa;
Bertolini, Francesca;
Fontanesi, Luca

Publication type:

Article

Mitochondrial sequence variants: testing imputation accuracy and their association with dairy cattle milk traits.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00931-5

By:

Dorji, Jigme;
Chamberlain, Amanda J.;
Reich, Coralie M.;
VanderJagt, Christy J.;
Nguyen, Tuan V.;
Daetwyler, Hans D.;
MacLeod, Iona M.

Publication type:

Article

Genotyping both live and dead animals to improve post-weaning survival of pigs in breeding programs.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00932-4

By:

Sharif-Islam, Md;
van der Werf, Julius H. J.;
Henryon, Mark;
Chu, Thinh Tuan;
Wood, Benjamin J.;
Hermesch, Susanne

Publication type:

Article

Marker effect p-values for single-step GWAS with the algorithm for proven and young in large genotyped populations.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00925-3

By:

Leite, Natália Galoro;
Bermann, Matias;
Tsuruta, Shogo;
Misztal, Ignacy;
Lourenco, Daniela

Publication type:

Article

A computationally feasible multi-trait single-step genomic prediction model with trait-specific marker weights.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00926-2

By:

Strandén, Ismo;
Jenko, Janez

Publication type:

Article

Analysis of the genetic variance of fibre diameter measured along the wool staple for use as a potential indicator of resilience in sheep.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00924-4

By:

Smith, Erin G.;
Waters, Dominic L.;
Walkom, Samuel F.;
Clark, Sam A.

Publication type:

Article

The black honey bee genome: insights on specific structural elements and a first step towards pangenomes.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00917-3

By:

Eynard, Sonia E.;
Klopp, Christophe;
Canale-Tabet, Kamila;
Marande, William;
Vandecasteele, Céline;
Roques, Céline;
Donnadieu, Cécile;
Boone, Quentin;
Servin, Bertrand;
Vignal, Alain

Publication type:

Article

Investigating the footprint of post-domestication dispersal on the diversity of modern European, African and Asian goats.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00923-5

By:

Petretto, Elena;
Dettori, Maria Luisa;
Luigi-Sierra, María Gracia;
Noce, Antonia;
Pazzola, Michele;
Vacca, Giuseppe Massimo;
Molina, Antonio;
Martínez, Amparo;
Goyache, Félix;
Carolan, Sean;
Kijas, James;
Guldbrandtsen, Bernt;
Kantanen, Juha;
Duby, Dylan;
Martin, Pierre;
Danchin, Coralie;
Duclos, Delphine;
Allain, Daniel;
Arquet, Rémy;
Mandonnet, Nathalie

Publication type:

Article

Predictive ability of multi-population genomic prediction methods of phenotypes for reproduction traits in Chinese and Austrian pigs.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00915-5

By:

Wang, Xue;
Zhang, Zipeng;
Du, Hehe;
Pfeiffer, Christina;
Mészáros, Gábor;
Ding, Xiangdong

Publication type:

Article

Using high-density SNP data to unravel the origin of the Franches-Montagnes horse breed.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00922-6

By:

Gmel, Annik Imogen;
Mikko, Sofia;
Ricard, Anne;
Velie, Brandon D.;
Gerber, Vinzenz;
Hamilton, Natasha Anne;
Neuditschko, Markus

Publication type:

Article

Genetic and genomic analysis of Belgian Blue's susceptibility for psoroptic mange.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00921-7

By:

Meyermans, Roel;
Janssens, Steven;
Coussé, Annelies;
Tinel, Susanne;
Gorssen, Wim;
Lepot, Fabrice;
Hubin, Xavier;
Mayeres, Patrick;
Veulemans, Wim;
De Wilde, Nathalie;
Druet, Tom;
Georges, Michel;
Charlier, Carole;
Claerebout, Edwin;
Buys, Nadine

Publication type:

Article

Genetic diversity of United States Rambouillet, Katahdin and Dorper sheep.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00905-7

By:

Becker, Gabrielle M.;
Thorne, Jacob W.;
Burke, Joan M.;
Lewis, Ronald M.;
Notter, David R.;
Morgan, James L. M.;
Schauer, Christopher S.;
Stewart, Whit C.;
Redden, R. R.;
Murdoch, Brenda M.

Publication type:

Article

Allele-specific binding variants causing ChIP-seq peak height of histone modification are not enriched in expression QTL annotations.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00916-4

By:

Ghoreishifar, Mohammad;
Chamberlain, Amanda J.;
Xiang, Ruidong;
Prowse-Wilkins, Claire P.;
Lopdell, Thomas J.;
Littlejohn, Mathew D.;
Pryce, Jennie E.;
Goddard, Michael E.

Publication type:

Article

Meta-analysis of six dairy cattle breeds reveals biologically relevant candidate genes for mastitis resistance.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00920-8

By:

Cai, Zexi;
Iso-Touru, Terhi;
Sanchez, Marie-Pierre;
Kadri, Naveen;
Bouwman, Aniek C.;
Chitneedi, Praveen Krishna;
MacLeod, Iona M.;
Vander Jagt, Christy J.;
Chamberlain, Amanda J.;
Gredler-Grandl, Birgit;
Spengeler, Mirjam;
Lund, Mogens Sandø;
Boichard, Didier;
Kühn, Christa;
Pausch, Hubert;
Vilkki, Johanna;
Sahana, Goutam

Publication type:

Article

Breeding for resilience in finishing pigs can decrease tail biting, lameness and mortality.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00919-1

By:

Gorssen, Wim;
Winters, Carmen;
Meyermans, Roel;
Chapard, Léa;
Hooyberghs, Katrijn;
Depuydt, Jürgen;
Janssens, Steven;
Mulder, Han;
Buys, Nadine

Publication type:

Article

The RHCE gene encodes the chicken blood system I.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00911-9

By:

Fulton, Janet E.;
McCarron, Amy M.;
Lund, Ashlee R.;
Drobik-Czwarno, Wioleta;
Mullen, Abigail;
Wolc, Anna;
Szadkowska, Joanna;
Schmidt, Carl J.;
Taylor Jr, Robert L.

Publication type:

Article

Investigating the impact of paternal age, paternal heat stress, and estimation of non-genetic paternal variance on dairy cow phenotype.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00918-2

By:

Fouéré, Corentin;
Hozé, Chris;
Besnard, Florian;
Boussaha, Mekki;
Boichard, Didier;
Sanchez, Marie-Pierre

Publication type:

Article

Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00914-6

By:

Reich, Paula;
Möller, Sandra;
Stock, Kathrin F.;
Nolte, Wietje;
von Depka Prondzinski, Mario;
Reents, Reinhard;
Kalm, Ernst;
Kühn, Christa;
Thaller, Georg;
Falker-Gieske, Clemens;
Tetens, Jens

Publication type:

Article

Genetic parameters for novel climatic resilience indicators derived from automatically-recorded vaginal temperature in lactating sows under heat stress conditions.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00908-4

By:

Wen, Hui;
Johnson, Jay S.;
Gloria, Leonardo S.;
Araujo, Andre C.;
Maskal, Jacob M.;
Hartman, Sharlene Olivette;
de Carvalho, Felipe E.;
Rocha, Artur Oliveira;
Huang, Yijian;
Tiezzi, Francesco;
Maltecca, Christian;
Schinckel, Allan P.;
Brito, Luiz F.

Publication type:

Article

Definition of metafounders based on population structure analysis.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00913-7

By:

Anglhuber, Christine;
Edel, Christian;
Pimentel, Eduardo C. G.;
Emmerling, Reiner;
Götz, Kay-Uwe;
Thaller, Georg

Publication type:

Article

Using expression data to fine map QTL associated with fertility in dairy cattle.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00912-8

By:

van den Berg, Irene;
Chamberlain, Amanda J.;
MacLeod, Iona M.;
Nguyen, Tuan V.;
Goddard, Mike E.;
Xiang, Ruidong;
Mason, Brett;
Meier, Susanne;
Phyn, Claire V. C.;
Burke, Chris R.;
Pryce, Jennie E.

Publication type:

Article

Integration of selective sweeps across the sheep genome: understanding the relationship between production and adaptation traits.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00910-w

By:

Fonseca, Pablo A. S.;
Suárez-Vega, Aroa;
Arranz, Juan J.;
Gutiérrez-Gil, Beatriz

Publication type:

Article

A recurrent de novo missense mutation in COL1A1 causes osteogenesis imperfecta type II and preterm delivery in Normande cattle.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00909-3

By:

Corbeau, Julien;
Grohs, Cécile;
Jourdain, Jeanlin;
Boussaha, Mekki;
Besnard, Florian;
Barbat, Anne;
Plassard, Vincent;
Rivière, Julie;
Hamelin, Christophe;
Mortier, Jeremy;
Boichard, Didier;
Guatteo, Raphaël;
Capitan, Aurélien

Publication type:

Article

Improving selection decisions with mating information by accounting for Mendelian sampling variances looking two generations ahead.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00899-2

By:

Niehoff, Tobias A. M.;
ten Napel, Jan;
Bijma, Piter;
Pook, Torsten;
Wientjes, Yvonne C. J.;
Hegedűs, Bernadett;
Calus, Mario P. L.

Publication type:

Article

Accuracy of genomic prediction using multiple Atlantic salmon populations.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00907-5

By:

Ajasa, Afees A.;
Boison, Solomon A.;
Gjøen, Hans M.;
Lillehammer, Marie

Publication type:

Article

Whole-genome sequences restore the original classification of dabbling ducks (genus Anas).

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00904-8

By:

Zhang, Zhou;
Ai, Huashui;
Huang, Lusheng

Publication type:

Article

Academic research and training to advance global agriculture through quantitative genetics: a personal perspective on the contributions of Rohan Fernando.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00906-6

By:

Totir, Liviu Radu

Publication type:

Article

Genetic legacy and adaptive signatures: investigating the history, diversity, and selection signatures in Rendena cattle resilient to eighteenth century rinderpest epidemics.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00900-y

By:

Somenzi, Elisa;
Partel, Erika;
Barbato, Mario;
Chero Osorio, Ana María;
Colli, Licia;
Franceschi, Niccolò;
Mantovani, Roberto;
Pilla, Fabio;
Komjanc, Matteo;
Achilli, Alessandro;
Hauffe, Heidi Christine;
Ajmone Marsan, Paolo

Publication type:

Article

Equivalence of variance components between standard and recursive genetic models using LDL′ transformations.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00901-x

By:

Varona, Luis;
López-Carbonell, David;
Srihi, Houssemeddine;
Hervás-Rivero, Carlos;
González-Recio, Óscar;
Altarriba, Juan

Publication type:

Article

Genomic prediction of blood biomarkers of metabolic disorders in Holstein cattle using parametric and nonparametric models.

Published in:

Genetics Selection Evolution, 2024, v. 56, n. 1, p. 1, doi. 10.1186/s12711-024-00903-9

By:

Mota, Lucio F. M.;
Giannuzzi, Diana;
Pegolo, Sara;
Sturaro, Enrico;
Gianola, Daniel;
Negrini, Riccardo;
Trevisi, Erminio;
Ajmone Marsan, Paolo;
Cecchinato, Alessio

Publication type:

Article