Works matching IS 0999193X AND DT 2016 AND VI 48

Results: 96

Commentary on the 6th International Symposium of Animal Functional Genomics.

Published in:

2016

By:

Ajmone-Marsan, Paolo;
Stella, Alessandra

Publication type:

Image

Computational strategies for alternative single-step Bayesian regression models with large numbers of genotyped and non-genotyped animals.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0273-2

By:

Fernando, Rohan L.;
Hao Cheng;
Golden, Bruce L.;
Garrick, Dorian J.

Publication type:

Article

Genomic prediction using preselected DNA variants from a GWAS with whole-genome sequence data in Holstein-Friesian cattle.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 2, doi. 10.1186/s12711-016-0274-1

By:

Veerkamp, Roel F.;
Bouwman, Aniek C.;
Schrooten, Chris;
Calus, Mario P. L.

Publication type:

Article

Thermal sensitivity of growth indicates heritable variation in 1-year-old rainbow trout (Oncorhynchus mykiss).

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0272-3

By:

Janhunen, Matti;
Koskela, Juha;
Nguyễn Hữu Ninh;
Vehviläinen, Harri;
Koskinen, Heikki;
Nousiainen, Antti;
Ngô Phú Thỏa

Publication type:

Article

Divergent selection-induced obesity alters the composition and functional pathways of chicken gut microbiota.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0270-5

By:

Jinmei Ding;
Lele Zhao;
Lifeng Wang;
Wenjing Zhao;
Zhengxiao Zhai;
Li Leng;
Yuxiang Wang;
Chuan He;
Yan Zhang;
Heping Zhang;
Hui Li;
He Meng

Publication type:

Article

Genomic evaluation by including dominance effects and inbreeding depression for purebred and crossbred performance with an application in pigs.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0271-4

By:

Tao Xiang;
Christensen, Ole Fredslund;
Vitezica, Zulma Gladis;
Legarra, Andres

Publication type:

Article

Characterization and management of long runs of homozygosity in parental nucleus lines and their associated crossbred progeny.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0269-y

By:

Howard, Jeremy T.;
Tiezzi, Francesco;
Yijian Huang;
Gray, Kent A.;
Maltecca, Christian

Publication type:

Article

Quantitative genetic analysis of the bTB diagnostic single intradermal comparative cervical test (SICCT).

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0264-3

By:

Tsairidou, Smaragda;
Brotherstone, Susan;
Coffey, Mike;
Bishop, Stephen C.;
Woolliams, John A.

Publication type:

Article

From cow to cheese: genetic parameters of the flavour fingerprint of cheese investigated by direct-injection mass spectrometry (PTR-ToF-MS).

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0263-4

By:

Bergamaschi, Matteo;
Cecchinato, Alessio;
Biasioli, Franco;
Gasperi, Flavia;
Martin, Bruno;
Bittante, Giovanni

Publication type:

Article

Construction of a large collection of small genome variations in French dairy and beef breeds using whole-genome sequences.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0268-z

By:

Boussaha, Mekki;
Michot, Pauline;
Letaief, Rabia;
Hozé, Chris;
Fritz, Sébastien;
Grohs, Cécile;
Esquerré, Diane;
Duchesne, Amandine;
Philippe, Romain;
Blanquet, Véronique;
Phocas, Florence;
Floriot, Sandrine;
Rocha, Dominique;
Klopp, Christophe;
Capitan, Aurélien;
Boichard, Didier

Publication type:

Article

Dimensionality of genomic information and performance of the Algorithm for Proven and Young for different livestock species.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0261-6

By:

Pocrnic, Ivan;
Lourenco, Daniela A. L.;
Masuda, Yutaka;
Misztal, Ignacy

Publication type:

Article

Inter- and intra-reproducibility of genotypes from sheep technical replicates on Illumina and Affymetrix platforms.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0267-0

By:

Berry, Donagh P.;
O'Brien, Aine;
Wall, Eamonn;
McDermott, Kevin;
Randles, Shane;
Flynn, Paul;
Park, Stephen;
Grose, Jenny;
Weld, Rebecca;
McHugh, Noirin

Publication type:

Article

Selection of performance-tested young bulls and indirect responses in commercial beef cattle herds on pasture and in feedlots.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0265-2

By:

Raidan, Fernanda S. S.;
Santos, Dalinne C. C.;
Moraes, Mariana M.;
Araújo, Andresa E. M.;
Ventura, Henrique T.;
Bergmann, José A. G.;
Turra, Eduardo M.;
Toral, Fabio L. B.

Publication type:

Article

Semi-supervised learning for genomic prediction of novel traits with small reference populations: an application to residual feed intake in dairy cattle.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0262-5

By:

Chen Yao;
Xiaojin Zhu;
Weigel, Kent A.

Publication type:

Article

Sequence variants selected from a multi-breed GWAS can improve the reliability of genomic predictions in dairy cattle.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0259-0

By:

van den Berg, Irene;
Boichard, Didier;
Lund, Mogens S.

Publication type:

Article

Insight into the genetic composition of South African Sanga cattle using SNP data from cattle breeds worldwide.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0266-1

By:

Makina, Sithembile O.;
Whitacre, Lindsey K.;
Decker, Jared E.;
Taylor, Jeremy F.;
MacNeil, Michael D.;
Scholtz, Michiel M.;
van Marle-Köster, Este;
Muchadeyi, Farai C.;
Makgahlela, Mahlako L.;
Maiwashe, Azwihangwisi

Publication type:

Article

On the performance of tests for the detection of signatures of selection: a case study with the Spanish autochthonous beef cattle populations.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0258-1

By:

González-Rodríguez, Aldemar;
Munilla, Sebastián;
Mouresan, Elena F.;
Cañas-Álvarez, Jhon J.;
Díaz, Clara;
Piedrafta, Jesús;
Altarriba, Juan;
Baro, Jesús Á.;
Molina, Antonio;
Varona, Luis

Publication type:

Article

An efficient exact method to obtain GBLUP and single-step GBLUP when the genomic relationship matrix is singular.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0260-7

By:

Fernando, Rohan L.;
Hao Cheng;
Garrick, Dorian J.

Publication type:

Article

Fine mapping of a QTL on bovine chromosome 6 using imputed full sequence data suggests a key role for the group-specifc component (GC ) gene in clinical mastitis and milk production.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0257-2

By:

Olsen, Hanne Gro;
Knutsen, Tim Martin;
Lewandowska-Sabat, Anna M.;
Grove, Harald;
Nome, Torfnn;
Svendsen, Morten;
Arnyasi, Mariann;
Sodeland, Marte;
Sundsaasen, Kristil K.;
Dahl, Sandra Rinne;
Heringstad, Bjørg;
Hansen, Hanne H.;
Olsaker, Ingrid;
Kent, Matthew Peter;
Lien, Sigbjørn

Publication type:

Article

Systematic genotyping of groups of cows to improve genomic estimated breeding values of selection candidates.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0250-9

By:

Plieschke, Laura;
Edel, Christian;
Pimentel, Eduardo C. G.;
Emmerling, Reiner;
Bennewitz, Jörn;
Götz, Kay-Uwe

Publication type:

Article

Prevalence and consequences of chromosomal abnormalities in Canadian commercial swine herds.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0246-5

By:

Quach, Anh T.;
Revay, Tamas;
Villagomez, Daniel A. F.;
Macedo, Mariana P.;
Sullivan, Alison;
Maignel, Laurence;
Wyss, Stefanie;
Sullivan, Brian;
King, W. Allan

Publication type:

Article

Contributions of linkage disequilibrium and co-segregation information to the accuracy of genomic prediction.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0255-4

By:

Xiaochen Sun;
Fernando, Rohan;
Dekkers, Jack

Publication type:

Article

Study of the optimum haplotype length to build genomic relationship matrices.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0253-6

By:

Ferdosi, Mohammad H.;
Henshall, John;
Tier, Bruce

Publication type:

Article

Genome-wide association studies of immune, disease and production traits in indigenous chicken ecotypes.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0252-7

By:

Psifidi, Androniki;
Banos, Georgios;
Matika, Oswald;
Desta, Takele T.;
Bettridge, Judy;
Hume, David A.;
Dessie, Tadelle;
Christley, Rob;
Wigley, Paul;
Hanotte, Olivier;
Kaiser, Pete

Publication type:

Article

The 1.78-kb insertion in the 3'-untranslated region of RXFP2 does not segregate with horn status in sheep breeds with variable horn status.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0256-3

By:

Lühken, Gesine;
Krebs, Stefan;
Rothammer, Sophie;
Küpper, Julia;
Mioč, Boro;
Russ, Ingolf;
Medugorac, Ivica

Publication type:

Article

Disentangling the relative roles of resource acquisition and allocation on animal feed efficiency: insights from a dairy cow model.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0251-8

By:

Puillet, Laurence;
Réale, Denis;
Friggens, Nicolas C.

Publication type:

Article

Identification of selective sweeps reveals divergent selection between Chinese Holstein and Simmental cattle populations.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0254-5

By:

Minhui Chen;
Dunfei Pan;
Hongyan Ren;
Jinluan Fu;
Junya Li;
Guosheng Su;
Aiguo Wang;
Li Jiang;
Qin Zhang;
Jian-Feng Liu

Publication type:

Article

A fast Newton-Raphson based iterative algorithm for large scale optimal contribution selection.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0249-2

By:

Dagnachew, Binyam S.;
Meuwissen, Theo H. E.

Publication type:

Article

Response to selection while maximizing genetic variance in small populations.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0248-3

By:

Cervantes, Isabel;
Gutiérrez, Juan Pablo;
Meuwissen, Theo H. E.

Publication type:

Article

BESSiE: a software for linear model BLUP and Bayesian MCMC analysis of large-scale genomic data.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0241-x

By:

Boerner, Vinzent;
Tier, Bruce

Publication type:

Article

Genomic prediction using models with dominance and imprinting effects for backfat thickness and average daily gain in Danish Duroc pigs.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0245-6

By:

Guo, Xiangyu;
Christensen, Ole Fredslund;
Ostersen, Tage;
Yachun Wang;
Lund, Mogens Sandø;
Su, Guosheng

Publication type:

Article

Assessing accuracy of imputation using different SNP panel densities in a multi-breed sheep population.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0244-7

By:

Ventura, Ricardo V.;
Miller, Stephen P.;
Dodds, Ken G.;
Auvray, Benoit;
Lee, Michael;
Bixley, Matthew;
Clarke, Shannon M.;
McEwan, John C.

Publication type:

Article

MaGelLAn 1.0: a software to facilitate quantitative and population genetic analysis of maternal inheritance by combination of molecular and pedigree information.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0242-9

By:

Ristov, Strahil;
Brajkovic, Vladimir;
Cubric-Curik, Vlatka;
Michieli, Ivan;
Curik, Ino

Publication type:

Article

Moderate heritability of hepatopancreatic parvovirus titre suggests a new option for selection against viral diseases in banana shrimp (Fenneropenaeus merguiensis) and other aquaculture species.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0243-8

By:

Phuthaworn, Chontida;
Nguyen, Nguyen Hong;
Quinn, Jane;
Knibb, Wayne

Publication type:

Article

Genomic prediction of survival time in a population of brown laying hens showing cannibalistic behavior.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0247-4

By:

Alemu, Setegn W.;
Calus, Mario P. L.;
Muir, William M.;
Peeters, Katrijn;
Vereijken, Addie;
Bijma, Piter

Publication type:

Article

Whole-genome resequencing of Xishuangbanna fighting chicken to identify signatures of selection.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0239-4

By:

Xing Guo;
Qi Fang;
Chendong Ma;
Bangyuan Zhou;
Yi Wan;
Runshen Jiang

Publication type:

Article

Assigning breed origin to alleles in crossbred animals.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0240-y

By:

Vandenplas, Jérémie;
Calus, Mario P. L.;
Sevillano, Claudia A.;
Windig, Jack J.;
Bastiaansen, John W. M.

Publication type:

Article

Empirical determination of breed-of-origin of alleles in three-breed cross pigs.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0234-9

By:

Sevillano, Claudia A.;
Vandenplas, Jeremie;
Bastiaansen, John W. M.;
Calus, Mario P. L.

Publication type:

Article

Lessons for livestock genomics from genome and transcriptome sequencing in cattle and other mammals.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0237-6

By:

Taylor, Jeremy F;
Whitacre, Lynsey K.;
Hoff, Jesse L.;
Tizioto, Polyana C.;
JaeWoo Kim;
Decker, Jared E.;
Schnabel, Robert D.

Publication type:

Article

Use of canonical discriminant analysis to study signatures of selection in cattle.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0236-7

By:

Sorbolini, Silvia;
Gaspa, Giustino;
Steri, Roberto;
Dimauro, Corrado;
Cellesi, Massimo;
Stella, Alessandra;
Marras, Gabriele;
Marsan, Paolo Ajmone;
Valentini, Alessio;
Macciotta, Nicoló Pietro Paolo

Publication type:

Article

A reverse genetic approach identifies an ancestral frameshift mutation in RP1 causing recessive progressive retinal degeneration in European cattle breeds.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0232-y

By:

Michot, Pauline;
Chahory, Sabine;
Marete, Andrew;
Grohs, Cécile;
Dagios, Dimitri;
Donzel, Elise;
Aboukadiri, Abdelhak;
Deloche, Marie-Christine;
Allais-Bonnet, Aurélie;
Chambrial, Matthieu;
Barbey, Sarah;
Genestout, Lucie;
Boussaha, Mekki;
Danchin-Burge, Coralie;
Fritz, Sébastien;
Boichard, Didier;
Capitan, Aurélien

Publication type:

Article

Erratum to: Population structure and genome characterization of local pig breeds in Russia, Belorussia, Kazakhstan and Ukraine.

Published in:: 2016
Publication type:: Correction Notice

Comparison of gene-based rare variant association mapping methods for quantitative traits in a bovine population with complex familial relationships.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0238-5

By:

Qianqian Zhang;
Guldbrandtsen, Bernt;
Calus, Mario P. L.;
Lund, Mogens Sandø;
Sahana, Goutam

Publication type:

Article

Including α<sub>s1</sub> casein gene information in genomic evaluations of French dairy goats.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0233-x

By:

Carillier-Jacquin, Céline;
Larroque, Héléne;
Robert-Granié, Christéle

Publication type:

Article

Synergies between assisted reproduction technologies and functional genomics.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0231-z

By:

Loi, Pasqualino;
Toschi, Paola;
Zacchini, Federica;
Ptak, Grazyna;
Scapolo, Pier A.;
Capra, Emanuele;
Stella, Alessandra;
Marsan, Paolo Ajmone;
Williams, John L.

Publication type:

Article

A genome-wide perspective about the diversity and demographic history of seven Spanish goat breeds.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0229-6

By:

Manunza, Arianna;
Noce, Antonia;
Serradilla, Juan Manue;
Goyache, Félix;
Martínez, Amparo;
Capote, Juan;
Delgado, Juan Vicente;
Jordana, Jordi;
Muñoz, Eva;
Molina, Antonio;
Landi, Vincenzo;
Pons, Agueda;
Balteanu, Valentin;
Traoré, Amadou;
Vidilla, Montse;
Sánchez-Rodríguez, Manuel;
Sànchez, Armand;
Cardoso, Tainã Figueiredo;
Amills, Marcel

Publication type:

Article

Mating structures for genomic selection breeding programs in aquaculture.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0224-y

By:

Sonesson, Anna K.;
Ødegård, Jørgen

Publication type:

Article

Evaluation of breeding strategies for polledness in dairy cattle using a newly developed simulation framework for quantitative and Mendelian traits.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0228-7

By:

Scheper, Carsten;
Wensch-Dorendorf, Monika;
Tong Yin;
Dressel, Holger;
Swalve, Herrmann;
König, Sven

Publication type:

Article

Sparse single-step method for genomic evaluation in pigs.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0227-8

By:

Ostersen, Tage;
Christensen, Ole F.;
Madsen, Per;
Henryon, Mark

Publication type:

Article

Genomic prediction of host resistance to sea lice in farmed Atlantic salmon populations.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0226-9

By:

Hsin-Yuan Tsai;
Hamilton, Alastair;
Tinch, Alan E.;
Guy, Derrick R.;
Bron, James E.;
Taggart, John B.;
Gharbi, Karim;
Stear, Michael;
Matika, Oswald;
Ricardo Pong-Wong;
Bishop, Steve C.;
Houston, Ross D.

Publication type:

Article