Works matching IS 09618368 AND DT 2025 AND VI 34 AND IP 3

Results: 33

Docking guidance with experimental ligand structural density improves docking pose prediction and virtual screening performance.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70082

By:

Hansel‐Harris, Althea T.;
Tillack, Andreas F.;
Santos‐Martins, Diogo;
Holcomb, Matthew;
Forli, Stefano

Publication type:

Article

Nitro‐fatty acids‐mediated nitroalkylation modulates fine‐tuning catalase antioxidant function during salinity stress in plants.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70076

By:

Chaki, Mounira;
Aranda‐Caño, Lorena;
Begara‐Morales, Juan C.;
Sánchez‐Calvo, Beatriz;
López‐Jaramillo, Francisco Javier;
Padilla, María N.;
Valderrama, Raquel;
Pedrajas, José Rafael;
Barroso, Juan B.

Publication type:

Article

Understanding dry proteins and their protection with solid‐state hydrogen–deuterium exchange.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70075

By:

Brom, Julia A.;
Pielak, Gary J.

Publication type:

Article

Refinement and curation of homologous groups facilitated by structure prediction.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70074

By:

Schaeffer, Richard Dustin;
Pei, Jimin;
Zhang, Jing;
Cong, Qian;
Grishin, Nick V.

Publication type:

Article

An accelerated molecular dynamics study for investigating protein pathways using the bond‐boost hyperdynamics method.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70073

By:

Park, Soon Woo;
Choi, Moon‐ki;
Lee, Byung Ho;
Seo, Sangjae;
Kim, Woo Kyun;
Kim, Moon Ki

Publication type:

Article

Taming interleukin‐12: Engineering of bispecific antibody‐based IL‐12 mimetics with biased agonism capacities.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70072

By:

Lipinski, Britta;
Unmuth, Laura;
Arras, Paul;
Endruszeit, Ron;
Becker, Stefan;
Rödel, Jonathan Mathias;
Scheller, Jürgen;
Pudewell, Silke;
Floss, Doreen M.;
Krah, Simon;
Harwardt, Julia;
Doerner, Achim;
Helming, Laura;
Xu, Chunxiao;
Menrad, Andreas;
Evers, Andreas;
Kolmar, Harald;
Elter, Desislava;
Pekar, Lukas;
Zielonka, Stefan

Publication type:

Article

Insights into the low‐temperature adaptation of an enzyme as studied through ancestral sequence reconstruction.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70071

By:

Cui, Shuang;
Dasgupta, Subrata;
Yagi, Sota;
Kimura, Madoka;
Furukawa, Ryutaro;
Tagami, Shunsuke;
Akanuma, Satoshi

Publication type:

Article

Controlled by disorder: Phosphorylation modulates SRSF1 domain availability for spliceosome assembly.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70070

By:

Fargason, Talia;
Powell, Erin;
De Silva, Naiduwadura Ivon Upekala;
Paul, Trenton;
Zhang, Zihan;
Prevelige, Peter;
Zhang, Jun

Publication type:

Article

A robust fluorogenic substrate for chikungunya virus protease (nsP2) activity.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70069

By:

Makhaik, Sparsh;
Rut, Wioletta;
Choudhary, Shruti;
Upadhyay, Tulsi;
Hao, Chenzhou;
Westberg, Michael;
Bobst, Cedric;
Yoo, Euna;
Fejzo, Jasna;
Lin, Michael Z.;
Bogyo, Matthew;
Thompson, Paul;
Drag, Marcin;
Hardy, Jeanne A.

Publication type:

Article

Unraveling the molecular grammar and the structural transitions underlying the fibrillation of a viral fibrillogenic domain.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70068

By:

Gondelaud, Frank;
Leval, Julien;
Arora, Lisha;
Walimbe, Anuja;
Bignon, Christophe;
Ptchelkine, Denis;
Brocca, Stefania;
Mukhopadyay, Samrat;
Longhi, Sonia

Publication type:

Article

Guide to the structural characterization of protein aggregates and amyloid fibrils by CD spectroscopy.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70066

By:

Kardos, József;
Nyiri, Márton Péter;
Moussong, Éva;
Wien, Frank;
Molnár, Tamás;
Murvai, Nikoletta;
Tóth, Vilmos;
Vadászi, Henrietta;
Kun, Judit;
Jamme, Frédéric;
Micsonai, András

Publication type:

Article

FASTIA: A rapid and accessible platform for protein variant interaction analysis demonstrated with a single‐domain antibody.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70065

By:

Matsunaga, Ryo;
Tsumoto, Kouhei

Publication type:

Article

Stabilization of a protein by a single halogen‐based aromatic amplifier.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70064

By:

El Hage, Krystel;
Dhayalan, Balamurugan;
Chen, Yen‐Shan;
Phillips, Nelson B.;
Whittaker, Jonathan;
Carr, Kelley;
Whittaker, Linda;
Phillips, Manijeh H.;
Ismail‐Beigi, Faramarz;
Meuwly, Markus;
Weiss, Michael A.

Publication type:

Article

Interfacing bacterial microcompartment shell proteins with genetically encoded condensates.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70061

By:

Costantino, Michele;
Young, Eric J.;
Banerjee, Abesh;
Kerfeld, Cheryl A.;
Ghirlanda, Giovanna

Publication type:

Article

Functional characterization of two AA10 lytic polysaccharide monooxygenases from Cellulomonas gelida.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70060

By:

Turunen, Rosaliina;
Tuveng, Tina R.;
Forsberg, Zarah;
Schiml, Valerie C.;
Eijsink, Vincent G. H.;
Arntzen, Magnus Ø.

Publication type:

Article

Diversity in the protective role(s) of the conserved motif 1 from tardigrade cytoplasmic‐abundant heat‐soluble proteins during drying.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70059

By:

Biswas, Sourav;
Boothby, Thomas C.

Publication type:

Article

Insights into the diversity of CAHS protein function: Response to "Diversity in the protective role(s) of the conserved motif 1 from tardigrade cytoplasmic abundant heat soluble proteins during drying".

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70058

By:

Kang, Donguk;
Park, Chin‐Ju

Publication type:

Article

Exploring P450 superfamily diversity with P450Atlas ‐ Online tool for automated subfamily assignment.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70057

By:

Gront, Dominik;
Syed, Khajamohiddin;
Nelson, David R.

Publication type:

Article

ShiftScan: A tool for rapid analysis of high‐throughput differential scanning fluorimetry data and compound prioritization.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70055

By:

Waterworth, Samantha C.;
Shenoy, Shilpa R.;
Sharma, Nirmala D.;
Wolcott, Chris;
Donohue, Duncan E.;
O'Keefe, Barry R.;
Beutler, John A.

Publication type:

Article

From duplication to fusion: Expanding Dayhoff's model of protein evolution.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70054

By:

Muthahari, Yusran Abdillah;
Magnus, Lilian;
Laurino, Paola

Publication type:

Article

Non‐canonical ORFs‐derived protein products in mitochondria: A multifaceted exploration of their functions in health and disease.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70053

By:

Ajala, Ikram;
Vanderperre, Benoît

Publication type:

Article

Protein Data Bank Japan: Improved tools for sequence‐oriented analysis of protein structures.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70052

By:

Bekker, Gert‐Jan;
Nagao, Chioko;
Shirota, Matsuyuki;
Nakamura, Tsukasa;
Katayama, Toshiaki;
Kihara, Daisuke;
Kinoshita, Kengo;
Kurisu, Genji

Publication type:

Article

Engineering IGF2 for Lysosome‐targeting chimeras development to target drug‐resistant membrane proteins in tumor therapy.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70051

By:

Pan, Yanchao;
Xiang, Qing;
Deng, Kai;
Anwar, Muhammad I.;
Wang, Leiming;
Wang, Yuan;
Liang, Qiulian;
Shen, Lirou;
Yang, Jing;
Hou, Zhongyu;
Shen, Weijun

Publication type:

Article

Torsional twist of the SARS‐CoV and SARS‐CoV‐2 SUD‐N and SUD‐M domains.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70050

By:

Rosas‐Lemus, Monica;
Minasov, George;
Brunzelle, Joseph S.;
Taha, Taha Y.;
Lemak, Sofia;
Yin, Shaohui;
Shuvalova, Ludmilla;
Rosecrans, Julia;
Khanna, Kanika;
Seifert, H. Steven;
Savchenko, Alexei;
Stogios, Peter J.;
Ott, Melanie;
Satchell, Karla J. F.

Publication type:

Article

An improved variant of tobacco etch virus (TEV) protease that does not need reducing agents.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70049

By:

Davis, Stella M.;
Romig, Bryn L.;
Abe, Alyssa A.;
Loening, Nikolaus M.

Publication type:

Article

Folding of a tandemly knotted protein: Evidence that a polypeptide chain can get out of deep kinetic traps.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70048

By:

Zhang, Hongyu;
Jackson, Sophie E.

Publication type:

Article

Exploring the proton transport mechanism of the mitochondrial ADP/ATP carrier: FA‐cycling hypothesis and beyond.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70047

By:

Pohl, Elena E.;
Vazdar, Mario;
Kreiter, Jürgen

Publication type:

Article

ExploreTurns: A web tool for the exploration, analysis, and classification of beta turns and structured loops in proteins; application to beta‐bulge and Schellman loops, Asx helix caps, beta hairpins, and other hydrogen‐bonded motifs.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70046

By:

Newell, Nicholas E.

Publication type:

Article

Conformational flexibility associated with remote residues regulates the kinetic properties of glutamate dehydrogenase.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70038

By:

Godsora, Barsa Kanchan Jyotshna;
Das, Parijat;
Mishra, Prasoon Kumar;
Sairaman, Anjali;
Kaledhonkar, Sandip;
Punekar, Narayan S.;
Bhaumik, Prasenjit

Publication type:

Article

Impact of local unfolding fluctuations on the evolution of regional sequence preferences in proteins.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.70015

By:

Voortman‐Sheetz, Keila;
Wrabl, James O.;
Hilser, Vincent J.

Publication type:

Article

PEG–mCherry interactions beyond classical macromolecular crowding.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.5235

By:

Haas‐Neill, Liam;
Joron, Khalil;
Lerner, Eitan;
Rauscher, Sarah

Publication type:

Article

Cover Image.

Published in:: Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.5044
Publication type:: Article

Issue information.

Published in:: Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 3, p. 1, doi. 10.1002/pro.5043
Publication type:: Article