Works matching IS 09618368 AND DT 2022 AND VI 31 AND IP 11

Results: 27

Issue information.

Published in:: Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4111
Publication type:: Article

Cover Image.

Published in:: Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4475
Publication type:: Article

Characterization of the Escherichia coli pyridoxal 5′‐phosphate homeostasis protein (YggS): Role of lysine residues in PLP binding and protein stability.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4471

By:

Tramonti, Angela;
Ghatge, Mohini S.;
Babor, Jill T.;
Musayev, Faik N.;
di Salvo, Martino Luigi;
Barile, Anna;
Colotti, Gianni;
Giorgi, Alessandra;
Paredes, Steven D.;
Donkor, Akua K.;
Al Mughram, Mohammed H.;
de Crécy‐Lagard, Valérie;
Safo, Martin K.;
Contestabile, Roberto

Publication type:

Article

Bioplastic degradation by a polyhydroxybutyrate depolymerase from a thermophilic soil bacterium.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4470

By:

Thomas, Gwendell M.;
Quirk, Stephen;
Huard, Dustin J. E.;
Lieberman, Raquel L.

Publication type:

Article

Uncovering the promiscuous activity of IL‐6 proteins: A multi‐dimensional analysis of phylogeny, classification and residue conservation.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4469

By:

Costa, André da;
Franco‐Duarte, Ricardo;
Machado, Raul;
Gomes, Andreia C.

Publication type:

Article

The production of recombinant platelet‐derived growth factor D using the second generation modified vaccinia Ankara viral system.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4468

By:

Najy, Abdo J.;
Pham, Tri;
Pradeau‐Aubreton, Karine;
Drillien, Robert;
Kim, Hyeong‐Reh C.

Publication type:

Article

BayeStab: Predicting effects of mutations on protein stability with uncertainty quantification.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4467

By:

Wang, Shuyu;
Tang, Hongzhou;
Zhao, Yuliang;
Zuo, Lei

Publication type:

Article

Intrinsic protein disorder and conditional folding in AlphaFoldDB.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4466

By:

Piovesan, Damiano;
Monzon, Alexander Miguel;
Tosatto, Silvio C. E.

Publication type:

Article

DomainMapper: Accurate domain structure annotation including those with non‐contiguous topologies.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4465

By:

Manriquez‐Sandoval, Edgar;
Fried, Stephen D.

Publication type:

Article

Development of functional anti‐Gn nanobodies specific for SFTSV based on next‐generation sequencing and proteomics.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4461

By:

Wang, Binghao;
Huang, Bilian;
Li, Xinyu;
Guo, Yan;
Qi, Guantong;
Ding, Yibing;
Gao, Haidong;
Zhang, Jingzi;
Wu, Xilin;
Fang, Lei

Publication type:

Article

In situ tools for chromatin structural epigenomics.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4458

By:

Henikoff, Steven;
Ahmad, Kami

Publication type:

Article

Structure and specificity of an anti‐chloramphenicol single domain antibody for detection of amphenicol residues.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4457

By:

Swofford, Charles A.;
Nordeen, Sarah A.;
Chen, Lu;
Desai, Mahaam M;
Chen, Joanna;
Springs, Stacy L.;
Schwartz, Thomas U.;
Sinskey, Anthony J.

Publication type:

Article

Mechanistic basis of GPCR activation explored by ensemble refinement of crystallographic structures.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4456

By:

Madsen, Jesper J.;
Ye, Libin;
Frimurer, Thomas M.;
Olsen, Ole H.

Publication type:

Article

Intrinsic protein disorder uncouples affinity from binding specificity.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4455

By:

Lazar, Tamas;
Tantos, Agnes;
Tompa, Peter;
Schad, Eva

Publication type:

Article

A method for selective <sup>19</sup>F‐labeling absent of probe sequestration (SLAPS).

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4454

By:

Dixon, Austin D.;
Robson, Scott A.;
Trinidad, Jonathan C.;
Ziarek, Joshua J.

Publication type:

Article

kinCSM: Using graph‐based signatures to predict small molecule CDK2 inhibitors.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4453

By:

Zhou, Yunzhuo;
Al‐Jarf, Raghad;
Alavi, Azadeh;
Nguyen, Thanh Binh;
Rodrigues, Carlos H. M.;
Pires, Douglas E. V.;
Ascher, David B.

Publication type:

Article

Hybrid in vitro/in silico analysis of low‐affinity protein–protein interactions that regulate signal transduction by Sema6D.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4452

By:

Tanaka, Tsubasa;
Ekimoto, Toru;
Nagatomo, Meri;
Neyazaki, Makiko;
Shimoji, Erena;
Yamane, Tsutomu;
Kanagawa, Sakura;
Oi, Rika;
Mihara, Emiko;
Takagi, Junichi;
Akashi, Satoko;
Ikeguchi, Mitsunori;
Nogi, Terukazu

Publication type:

Article

Host and viral proteins involved in SARS‐CoV‐2 infection differentially bind heme.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4451

By:

Hopp, Marie‐T.;
Rathod, Dhruv C.;
Imhof, Diana

Publication type:

Article

Molecular basis for thermal stability and affinity in a VHH: Contribution of the framework region and its influence in the conformation of the CDR3.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4450

By:

Kinoshita, Seisho;
Nakakido, Makoto;
Mori, Chinatsu;
Kuroda, Daisuke;
Caaveiro, Jose M.M.;
Tsumoto, Kouhei

Publication type:

Article

Simple mechanisms for the evolution of protein complexity.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4449

By:

Pillai, Arvind S.;
Hochberg, Georg K.A.;
Thornton, Joseph W.

Publication type:

Article

Chaperoning activity of the cyclophilin family prevents tau aggregation.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4448

By:

Hill, Shannon E.;
Esquivel, Abigail R.;
Ospina, Santiago Rodriguez;
Rahal, Lauren M.;
Dickey, Chad A.;
Blair, Laura J.

Publication type:

Article

Evolutionary trajectory of receptor binding specificity and promiscuity of the spike protein of SARS‐CoV‐2.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4447

By:

Planchais, Cyril;
Reyes‐Ruiz, Alejandra;
Lacombe, Robin;
Zarantonello, Alessandra;
Lecerf, Maxime;
Revel, Margot;
Roumenina, Lubka T.;
Atanasov, Boris P.;
Mouquet, Hugo;
Dimitrov, Jordan D.

Publication type:

Article

CHARMM‐GUI Enhanced Sampler for various collective variables and enhanced sampling methods.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4446

By:

Suh, Donghyuk;
Feng, Shasha;
Lee, Hwayoung;
Zhang, Han;
Park, Sang‐Jun;
Kim, Seonghan;
Lee, Jumin;
Choi, Sun;
Im, Wonpil

Publication type:

Article

A look at the face of the molten globule: Structural model of the Helicobacter pylori apoflavodoxin ensemble at acidic pH.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4445

By:

Galano‐Frutos, Juan José;
Torreblanca, Renzo;
García‐Cebollada, Helena;
Sancho, Javier

Publication type:

Article

HDOCK update for modeling protein‐RNA/DNA complex structures.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4441

By:

Li, Hao;
Huang, Eddie;
Zhang, Yi;
Huang, Sheng‐You;
Xiao, Yi

Publication type:

Article

Molecular determinants of TRAF6 binding specificity suggest that native interaction partners are not optimized for affinity.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4429

By:

Halpin, Jackson C.;
Whitney, Dustin;
Rigoldi, Federica;
Sivaraman, Venkat;
Singer, Avinoam;
Keating, Amy E.

Publication type:

Article

Design and optimization of enzymatic activity in a de novo β‐barrel scaffold.

Published in:

Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 11, p. 1, doi. 10.1002/pro.4405

By:

Kipnis, Yakov;
Chaib, Anissa Ouald;
Vorobieva, Anastassia A.;
Cai, Guangyang;
Reggiano, Gabriella;
Basanta, Benjamin;
Kumar, Eshan;
Mittl, Peer R.E.;
Hilvert, Donald;
Baker, David

Publication type:

Article