Works matching IS 09618368 AND DT 2018 AND VI 27 AND IP 1

Results: 37

Issue Information.

Published in:: Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 1, doi. 10.1002/pro.3543
Publication type:: Article

Award Winners and Abstracts of the 32nd Annual Symposium of The Protein Society; Boston, MA, July 9–12, 2018.

Published in:: Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 11, doi. 10.1002/pro.3513
Publication type:: Article

Prediction of nearest neighbor effects on backbone torsion angles and NMR scalar coupling constants in disordered proteins.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 146, doi. 10.1002/pro.3292

By:

Shen, Yang;
Roche, Julien;
Grishaev, Alexander;
Bax, Ad

Publication type:

Article

Clustal Omega for making accurate alignments of many protein sequences.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 135, doi. 10.1002/pro.3290

By:

Sievers, Fabian;
Higgins, Desmond G.

Publication type:

Article

Guidelines for using Bsoft for high resolution reconstruction and validation of biomolecular structures from electron micrographs.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 159, doi. 10.1002/pro.3293

By:

Heymann, J. Bernard

Publication type:

Article

Dockground: A comprehensive data resource for modeling of protein complexes.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 172, doi. 10.1002/pro.3295

By:

Kundrotas, Petras J.;
Anishchenko, Ivan;
Dauzhenka, Taras;
Kotthoff, Ian;
Mnevets, Daniil;
Copeland, Matthew M.;
Vakser, Ilya A.

Publication type:

Article

Interactive comparison and remediation of collections of macromolecular structures.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 182, doi. 10.1002/pro.3296

By:

Moriarty, Nigel W.;
Liebschner, Dorothee;
Klei, Herbert E.;
Echols, Nathaniel;
Afonine, Pavel V.;
Headd, Jeffrey J.;
Poon, Billy K.;
Adams, Paul D.

Publication type:

Article

The SubCons webserver: A user friendly web interface for state-of-the-art subcellular localization prediction.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 195, doi. 10.1002/pro.3297

By:

Salvatore, M.;
Shu, N.;
Elofsson, A.

Publication type:

Article

Forty years of collaborative computational crystallography.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 202, doi. 10.1002/pro.3298

By:

Agirre, Jon;
Dodson, Eleanor

Publication type:

Article

Automating tasks in protein structure determination with the clipper python module.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 207, doi. 10.1002/pro.3299

By:

McNicholas, Stuart;
Croll, Tristan;
Burnley, Tom;
Palmer, Colin M.;
Hoh, Soon Wen;
Jenkins, Huw T.;
Dodson, Eleanor;
Cowtan, Kevin;
Agirre, Jon

Publication type:

Article

Xplor-NIH for molecular structure determination from NMR and other data sources.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 26, doi. 10.1002/pro.3248

By:

Schwieters, Charles D.;
Bermejo, Guillermo A.;
Clore, G. Marius

Publication type:

Article

Ensemblator v3: Robust atom-level comparative analyses and classification of protein structure ensembles.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 41, doi. 10.1002/pro.3249

By:

Brereton, Andrew E.;
Karplus, P. Andrew

Publication type:

Article

Integrative structure modeling with the Integrative Modeling Platform.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 245, doi. 10.1002/pro.3311

By:

Webb, Benjamin;
Viswanath, Shruthi;
Bonomi, Massimiliano;
Pellarin, Riccardo;
Greenberg, Charles H.;
Saltzberg, Daniel;
Sali, Andrej

Publication type:

Article

Web-accessible molecular modeling with Rosetta: The Rosetta Online Server that Includes Everyone (ROSIE).

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 259, doi. 10.1002/pro.3313

By:

Moretti, Rocco;
Lyskov, Sergey;
Das, Rhiju;
Meiler, Jens;
Gray, Jeffrey J.

Publication type:

Article

Scipion web tools: Easy to use cryo-EM image processing over the web.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 269, doi. 10.1002/pro.3315

By:

Conesa Mingo, Pablo;
Gutierrez, José;
Quintana, Adrián;
de la Rosa Trevín, José Miguel;
Zaldívar‐Peraza, Airén;
Cuenca Alba, Jesús;
Kazemi, Mohsen;
Vargas, Javier;
del Cano, Laura;
Segura, Joan;
Sorzano, Carlos Oscar S.;
Carazo, Jose María

Publication type:

Article

Single-particle cryo-EM-Improved ab initio 3D reconstruction with SIMPLE/PRIME.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 51, doi. 10.1002/pro.3266

By:

Reboul, Cyril F.;
Eager, Michael;
Elmlund, Dominika;
Elmlund, Hans

Publication type:

Article

Visualizing correlated motion with HDBSCAN clustering.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 62, doi. 10.1002/pro.3268

By:

Melvin, Ryan L.;
Xiao, Jiajie;
Godwin, Ryan C.;
Berenhaut, Kenneth S.;
Salsbury, Jr., Freddie R.

Publication type:

Article

MMM: A toolbox for integrative structure modeling.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 76, doi. 10.1002/pro.3269

By:

Jeschke, Gunnar

Publication type:

Article

MolProbity: More and better reference data for improved all-atom structure validation.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 293, doi. 10.1002/pro.3330

By:

Williams, Christopher J.;
Headd, Jeffrey J.;
Moriarty, Nigel W.;
Prisant, Michael G.;
Videau, Lizbeth L.;
Deis, Lindsay N.;
Verma, Vishal;
Keedy, Daniel A.;
Hintze, Bradley J.;
Chen, Vincent B.;
Jain, Swati;
Lewis, Steven M.;
Arendall, III, W. Bryan;
Snoeyink, Jack;
Adams, Paul D.;
Lovell, Simon C.;
Richardson, Jane S.;
Richardson, David C.

Publication type:

Article

RCSB Protein Data Bank: Sustaining a living digital data resource that enables breakthroughs in scientific research and biomedical education.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 316, doi. 10.1002/pro.3331

By:

Burley, Stephen K.;
Berman, Helen M.;
Christie, Cole;
Duarte, Jose M.;
Feng, Zukang;
Westbrook, John;
Young, Jasmine;
Zardecki, Christine

Publication type:

Article

Prediction of protein disorder based on IUPred.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 331, doi. 10.1002/pro.3334

By:

Dosztányi, Zsuzsanna

Publication type:

Article

Computational design of membrane proteins using RosettaMembrane.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 341, doi. 10.1002/pro.3335

By:

Duran, Amanda M.;
Meiler, Jens

Publication type:

Article

Improvements to the APBS biomolecular solvation software suite.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 112, doi. 10.1002/pro.3280

By:

Jurrus, Elizabeth;
Engel, Dave;
Star, Keith;
Monson, Kyle;
Brandi, Juan;
Felberg, Lisa E.;
Brookes, David H.;
Wilson, Leighton;
Chen, Jiahui;
Liles, Karina;
Chun, Minju;
Li, Peter;
Gohara, David W.;
Dolinsky, Todd;
Konecny, Robert;
Koes, David R.;
Nielsen, Jens Erik;
Head‐Gordon, Teresa;
Geng, Weihua;
Krasny, Robert

Publication type:

Article

%MinMax: A versatile tool for calculating and comparing synonymous codon usage and its impact on protein folding.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 356, doi. 10.1002/pro.3336

By:

Rodriguez, Anabel;
Wright, Gabriel;
Emrich, Scott;
Clark, Patricia L.

Publication type:

Article

PDBsum: Structural summaries of PDB entries.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 129, doi. 10.1002/pro.3289

By:

Laskowski, Roman A.;
Jabłońska, Jagoda;
Pravda, Lukáš;
Vařeková, Radka Svobodová;
Thornton, Janet M.

Publication type:

Article

Tools for protein science.

Published in:

2018

By:

Matthews, Brian

Publication type:

Editorial

UCSF ChimeraX: Meeting modern challenges in visualization and analysis.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 14, doi. 10.1002/pro.3235

By:

Goddard, Thomas D.;
Huang, Conrad C.;
Meng, Elaine C.;
Pettersen, Eric F.;
Couch, Gregory S.;
Morris, John H.;
Ferrin, Thomas E.

Publication type:

Article

Estimate your dose: RADDOSE-3D.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 217, doi. 10.1002/pro.3302

By:

Bury, Charles S.;
Brooks‐Bartlett, Jonathan C.;
Walsh, Steven P.;
Garman, Elspeth F.

Publication type:

Article

Anchor Query: Rapid online virtual screening for small-molecule protein-protein interaction inhibitors.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 229, doi. 10.1002/pro.3303

By:

Koes, David R.;
Dömling, Alexander;
Camacho, Carlos J.

Publication type:

Article

The human protein atlas: A spatial map of the human proteome.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 233, doi. 10.1002/pro.3307

By:

Thul, Peter J.;
Lindskog, Cecilia

Publication type:

Article

Issue information.

Published in:: Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 1, doi. 10.1002/pro.3251
Publication type:: Article

PixelDB: Protein-peptide complexes annotated with structural conservation of the peptide binding mode.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 276, doi. 10.1002/pro.3320

By:

Frappier, Vincent;
Duran, Madeleine;
Keating, Amy E.

Publication type:

Article

OPUS-CSF: A C-atom-based scoring function for ranking protein structural models.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 286, doi. 10.1002/pro.3327

By:

Xu, Gang;
Ma, Tianqi;
Zang, Tianwu;
Wang, Qinghua;
Ma, Jianpeng

Publication type:

Article

DichroMatch at the protein circular dichroism data bank (DM@PCDDB): A web-based tool for identifying protein nearest neighbors using circular dichroism spectroscopy.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 10, doi. 10.1002/pro.3207

By:

Whitmore, Lee;
Mavridis, Lazaros;
Wallace, B. A.;
Janes, Robert W.

Publication type:

Article

Molstack-Interactive visualization tool for presentation, interpretation, and validation of macromolecules and electron density maps.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 86, doi. 10.1002/pro.3272

By:

Porebski, Przemyslaw J.;
Sroka, Piotr;
Zheng, Heping;
Cooper, David R.;
Minor, Wladek

Publication type:

Article

New tools and functions in data-out activities at Protein Data Bank Japan (PDBj).

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 95, doi. 10.1002/pro.3273

By:

Kinjo, Akira R.;
Bekker, Gert‐Jan;
Wako, Hiroshi;
Endo, Shigeru;
Tsuchiya, Yuko;
Sato, Hiromu;
Nishi, Hafumi;
Kinoshita, Kengo;
Suzuki, Hirofumi;
Kawabata, Takeshi;
Yokochi, Masashi;
Iwata, Takeshi;
Kobayashi, Naohiro;
Fujiwara, Toshimichi;
Kurisu, Genji;
Nakamura, Haruki

Publication type:

Article

C CBuilder 2.0: Powerful and accessible coiled-coil modeling.

Published in:

Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 103, doi. 10.1002/pro.3279

By:

Wood, Christopher W.;
Woolfson, Derek N.

Publication type:

Article