Works matching IS 08873585 AND DT 2022 AND VI 90 AND IP 1

Results: 29

Crystal structure of aspartyl dipeptidase from Xenopus laevis revealed ligand binding induced loop ordering and catalytic triad assembly.

Published in:

Proteins, 2022, v. 90, n. 1, p. 299, doi. 10.1002/prot.26220

By:

Kumar, Ashwani;
Singh, Rahul;
Ghosh, Biplab;
Makde, Ravindra D.

Publication type:

Article

Computational modeling reveals key molecular properties and dynamic behavior of disruptor of telomeric silencing 1‐like (DOT1L) and partnering complexes involved in leukemogenesis.

Published in:

Proteins, 2022, v. 90, n. 1, p. 282, doi. 10.1002/prot.26219

By:

Stodola, Timothy J.;
Chi, Young‐In;
De Assuncao, Thiago M.;
Leverence, Elise N.;
Tripathi, Swarnendu;
Dsouza, Nikita R.;
Mathison, Angela J.;
Volkman, Brian F.;
Smith, Brian C.;
Lomberk, Gwen;
Zimmermann, Michael T.;
Urrutia, Raul

Publication type:

Article

New biochemical insights into the dynamics of water molecules at the GMP or IMP binding site of human GMPR enzyme: A molecular dynamics study.

Published in:

Proteins, 2022, v. 90, n. 1, p. 200, doi. 10.1002/prot.26207

By:

Bairagya, Hridoy R.;
Tasneem, Alvea;
Rai, Gyan Prakash;
Reyaz, Saima

Publication type:

Article

Evolutionary and structural constraints influencing apolipoprotein A‐I amyloid behavior.

Published in:

Proteins, 2022, v. 90, n. 1, p. 258, doi. 10.1002/prot.26217

By:

Gisonno, Romina A.;
Masson, Tomas;
Ramella, Nahuel A.;
Barrera, Exequiel E.;
Romanowski, Víctor;
Tricerri, M. Alejandra

Publication type:

Article

A study of a hierarchical structure of proteins and ligand binding sites of receptors using the triangular spatial relationship‐based structure comparison method and development of a size‐filtering feature designed for comparing different sizes of protein structures

Published in:

Proteins, 2022, v. 90, n. 1, p. 239, doi. 10.1002/prot.26215

By:

Kondra, Sarika;
Chen, Feng;
Chen, Yixin;
Chen, Yuwu;
Collette, Caleb J.;
Xu, Wu

Publication type:

Article

Identification of key stabilizing interactions of amyloid‐β oligomers based on fragment molecular orbital calculations on macrocyclic β‐hairpin peptides.

Published in:

Proteins, 2022, v. 90, n. 1, p. 229, doi. 10.1002/prot.26212

By:

Firouzi, Rohoullah;
Noohi, Bahare

Publication type:

Article

Dimerization underlies the aggregation propensity of intrinsically disordered coiled‐coil domain‐containing 124.

Published in:

Proteins, 2022, v. 90, n. 1, p. 218, doi. 10.1002/prot.26210

By:

Tuzlakoğlu Öztürk, Merve;
Güllülü, Ömer

Publication type:

Article

Surface salt bridges contribute to the extreme thermal stability of an FN3‐like domain from a thermophilic bacterium.

Published in:

Proteins, 2022, v. 90, n. 1, p. 270, doi. 10.1002/prot.26218

By:

Boucher, Lauren;
Somani, Sandeep;
Negron, Christopher;
Ma, Wenting;
Jacobs, Steven;
Chan, Winnie;
Malia, Thomas;
Obmolova, Galina;
Teplyakov, Alexey;
Gilliland, Gary L.;
Luo, Jinquan

Publication type:

Article

Allosteric regulation within the highly interconnected structural scaffold of AraC/XylS homologs tolerates a wide range of amino acid changes.

Published in:

Proteins, 2022, v. 90, n. 1, p. 186, doi. 10.1002/prot.26206

By:

Picard, Hunter R.;
Schwingen, Kristen S.;
Green, Lisa M.;
Shis, David L.;
Egan, Susan M.;
Bennett, Matthew R.;
Swint‐Kruse, Liskin

Publication type:

Article

A distinct ssDNA/RNA binding interface in the Nsp9 protein from SARS‐CoV‐2.

Published in:

Proteins, 2022, v. 90, n. 1, p. 176, doi. 10.1002/prot.26205

By:

El‐Kamand, Serene;
Du Plessis, Mar‐Dean;
Breen, Natasha;
Johnson, Lexie;
Beard, Samuel;
Kwan, Ann H.;
Richard, Derek J.;
Cubeddu, Liza;
Gamsjaeger, Roland

Publication type:

Article

Structural evidence that MOAP1 and PEG10 are derived from retrovirus/retrotransposon Gag proteins.

Published in:

Proteins, 2022, v. 90, n. 1, p. 309, doi. 10.1002/prot.26204

By:

Zurowska, Katarzyna;
Alam, Ayaan;
Ganser‐Pornillos, Barbie K.;
Pornillos, Owen

Publication type:

Article

TMEM106B in humans and Vac7 and Tag1 in yeast are predicted to be lipid transfer proteins.

Published in:: Proteins, 2022, v. 90, n. 1, p. 164, doi. 10.1002/prot.26201
Publication type:: Article

Structural elements determining the transglycosylating activity of glycoside hydrolase family 57 glycogen branching enzymes.

Published in:

Proteins, 2022, v. 90, n. 1, p. 155, doi. 10.1002/prot.26200

By:

Xiang, Gang;
Leemhuis, Hans;
van der Maarel, Marc Jos Elise Cornelis

Publication type:

Article

Molecular dynamics simulations reveal the disruption mechanism of a 2,4‐thiazolidinedione derivative C30 against tau hexapeptide (PHF6) oligomer.

Published in:

Proteins, 2022, v. 90, n. 1, p. 142, doi. 10.1002/prot.26196

By:

Liu, Hongli;
Zhong, Haiyang;
Liu, Huanxiang;
Yao, Xiaojun

Publication type:

Article

Structure–sequence features based prediction of phosphosites of serine/threonine protein kinases of Mycobacterium tuberculosis.

Published in:

Proteins, 2022, v. 90, n. 1, p. 131, doi. 10.1002/prot.26195

By:

Nilkanth, Vipul V.;
Mande, Shekhar C.

Publication type:

Article

Histidine protonation states are key in the LigI catalytic reaction mechanism.

Published in:

Proteins, 2022, v. 90, n. 1, p. 123, doi. 10.1002/prot.26191

By:

Zhao, Li Na;
Mondal, Dibyendu;
Li, Weifeng;
Mu, Yuguang;
Kaldis, Philipp

Publication type:

Article

Introduction of a new scheme for classifying β‐turns in protein structures.

Published in:

Proteins, 2022, v. 90, n. 1, p. 110, doi. 10.1002/prot.26190

By:

Zhang, Ruojing;
Stahr, Michael C.;
Kennedy, Michael A.

Publication type:

Article

The denatured state of HIV‐1 protease under native conditions.

Published in:

Proteins, 2022, v. 90, n. 1, p. 96, doi. 10.1002/prot.26189

By:

Rösner, Heike I.;
Caldarini, Martina;
Potel, Gregory;
Malmodin, Daniel;
Vanoni, Maria A.;
Aliverti, Alessandro;
Broglia, Ricardo A.;
Kragelund, Birthe B.;
Tiana, Guido

Publication type:

Article

Benchmarking of structure refinement methods for protein complex models.

Published in:

Proteins, 2022, v. 90, n. 1, p. 83, doi. 10.1002/prot.26188

By:

Verburgt, Jacob;
Kihara, Daisuke

Publication type:

Article

Dynamics in an unusual acyl carrier protein from a ladderane lipid‐synthesizing organism.

Published in:

Proteins, 2022, v. 90, n. 1, p. 73, doi. 10.1002/prot.26187

By:

Dietl, Andreas;
Barends, Thomas R. M.

Publication type:

Article

Improving protein tertiary structure prediction by deep learning and distance prediction in CASP14.

Published in:

Proteins, 2022, v. 90, n. 1, p. 58, doi. 10.1002/prot.26186

By:

Liu, Jian;
Wu, Tianqi;
Guo, Zhiye;
Hou, Jie;
Cheng, Jianlin

Publication type:

Article

Predicting mutant outcome by combining deep mutational scanning and machine learning.

Published in:

Proteins, 2022, v. 90, n. 1, p. 45, doi. 10.1002/prot.26184

By:

Sarfati, Hagit;
Naftaly, Si;
Papo, Niv;
Keasar, Chen

Publication type:

Article

Structures of the TetR‐like transcription regulator RcdA alone and in complexes with ligands.

Published in:

Proteins, 2022, v. 90, n. 1, p. 33, doi. 10.1002/prot.26183

By:

Pietrzyk‐Brzezinska, Agnieszka J.;
Cociurovscaia, Anna

Publication type:

Article

DynaBiS: A hierarchical sampling algorithm to identify flexible binding sites for large ligands and peptides.

Published in:

Proteins, 2022, v. 90, n. 1, p. 18, doi. 10.1002/prot.26182

By:

Melse, Okke;
Hecht, Sabrina;
Antes, Iris

Publication type:

Article

Characterization of a triazole scaffold compound as an inhibitor of Mycobacterium tuberculosis imidazoleglycerol‐phosphate dehydratase.

Published in:

Proteins, 2022, v. 90, n. 1, p. 3, doi. 10.1002/prot.26181

By:

Kumar, Deepak;
Jha, Bhavya;
Bhatia, Indu;
Ashraf, Anam;
Dwivedy, Abhisek;
Biswal, Bichitra Kumar

Publication type:

Article

Cover Image, Volume 90, Issue 1.

Published in:: Proteins, 2022, v. 90, n. 1, p. C4, doi. 10.1002/prot.26092
Publication type:: Article

Cover Image, Volume 90, Issue 1.

Published in:: Proteins, 2022, v. 90, n. 1, p. C1, doi. 10.1002/prot.26092
Publication type:: Article

Issue Information ‐ Forthcoming.

Published in:: Proteins, 2022, v. 90, n. 1, p. 314, doi. 10.1002/prot.26091
Publication type:: Article

Issue Information ‐ Table of Content.

Published in:: Proteins, 2022, v. 90, n. 1, p. 1, doi. 10.1002/prot.26090
Publication type:: Article