Works matching IS 08873585 AND DT 2014 AND VI 82 AND IP 10
Results: 51
Insights into a highly conserved network of hydrogen bonds in the agonist binding site of nicotinic acetylcholine receptors: A structural and theoretical study.
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- Proteins, 2014, v. 82, n. 10, p. 2303, doi. 10.1002/prot.24589
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- Article
Novel RNA recognition motif domain in the cytoplasmic polyadenylation element binding protein 3.
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- Proteins, 2014, v. 82, n. 10, p. 2879, doi. 10.1002/prot.24651
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Improving the orientation-dependent statistical potential using a reference state.
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- Proteins, 2014, v. 82, n. 10, p. 2383, doi. 10.1002/prot.24600
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Exploring the free energy landscape of a model β-hairpin peptide and its isoform.
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- Proteins, 2014, v. 82, n. 10, p. 2394, doi. 10.1002/prot.24601
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Network mapping among the functional domains of Chikungunya virus nonstructural proteins.
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- Proteins, 2014, v. 82, n. 10, p. 2403, doi. 10.1002/prot.24602
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- Article
Exploring the early stages of the pH-induced conformational change of influenza hemagglutinin.
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- Proteins, 2014, v. 82, n. 10, p. 2412, doi. 10.1002/prot.24606
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Binding site multiplicity with fatty acid ligands: Implications for the regulation of PKR kinase autophosphorylation with palmitate.
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- Proteins, 2014, v. 82, n. 10, p. 2429, doi. 10.1002/prot.24607
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- Article
Crystal structure of the secreted protein HP1454 from the human pathogen Helicobacter pylori.
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- Proteins, 2014, v. 82, n. 10, p. 2868, doi. 10.1002/prot.24608
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De novo inference of protein function from coarse-grained dynamics.
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- Proteins, 2014, v. 82, n. 10, p. 2443, doi. 10.1002/prot.24609
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Direct prediction of profiles of sequences compatible with a protein structure by neural networks with fragment-based local and energy-based nonlocal profiles.
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- Proteins, 2014, v. 82, n. 10, p. 2565, doi. 10.1002/prot.24620
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- Article
Predicting the side-chain dihedral angle distributions of nonpolar, aromatic, and polar amino acids using hard sphere models.
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- Proteins, 2014, v. 82, n. 10, p. 2574, doi. 10.1002/prot.24621
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Euclidean sections of protein conformation space and their implications in dimensionality reduction.
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- Proteins, 2014, v. 82, n. 10, p. 2585, doi. 10.1002/prot.24622
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Functional evolution of PLP-dependent enzymes based on active-site structural similarities.
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- Proteins, 2014, v. 82, n. 10, p. 2597, doi. 10.1002/prot.24624
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- Article
Molecular simulations of β-lactoglobulin complexed with fatty acids reveal the structural basis of ligand affinity to internal and possible external binding sites.
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- Proteins, 2014, v. 82, n. 10, p. 2609, doi. 10.1002/prot.24625
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- Article
Increasing stability of antibody via antibody engineering: Stability engineering on an anti-hVEGF.
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- Proteins, 2014, v. 82, n. 10, p. 2620, doi. 10.1002/prot.24626
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- Article
Effectiveness and limitations of local structural entropy optimization in the thermal stabilization of mesophilic and thermophilic adenylate kinases.
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- Proteins, 2014, v. 82, n. 10, p. 2631, doi. 10.1002/prot.24627
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- Article
Cytotoxicity of the V ibrio vulnificus MARTX toxin Effector DUF5 is linked to the C2A Subdomain.
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- Proteins, 2014, v. 82, n. 10, p. 2643, doi. 10.1002/prot.24628
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- Article
Geometrical comparison of two protein structures using Wigner-D functions.
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- Proteins, 2014, v. 82, n. 10, p. 2756, doi. 10.1002/prot.24640
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Computational design of protein antigens that interact with the CDR H3 loop of HIV broadly neutralizing antibody 2F5.
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- Proteins, 2014, v. 82, n. 10, p. 2770, doi. 10.1002/prot.24641
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Computational identification of post-translational modification-based nuclear import regulations by characterizing nuclear localization signal-import receptor interaction.
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- Proteins, 2014, v. 82, n. 10, p. 2783, doi. 10.1002/prot.24642
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Expansion of the APC superfamily of secondary carriers.
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- Proteins, 2014, v. 82, n. 10, p. 2797, doi. 10.1002/prot.24643
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Redesigning the type II' β-turn in green fluorescent protein to type I': Implications for folding kinetics and stability.
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- Proteins, 2014, v. 82, n. 10, p. 2812, doi. 10.1002/prot.24644
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Multiple polymer architectures of human polyhomeotic homolog 3 sterile alpha motif.
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- Proteins, 2014, v. 82, n. 10, p. 2823, doi. 10.1002/prot.24645
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- Article
Conformational transitions driven by pyridoxal-5′-phosphate uptake in the psychrophilic serine hydroxymethyltransferase from P sychromonas ingrahamii.
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- Proteins, 2014, v. 82, n. 10, p. 2831, doi. 10.1002/prot.24646
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Multivariate sequence analysis reveals additional function impacting residues in the SDR superfamily.
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- Proteins, 2014, v. 82, n. 10, p. 2842, doi. 10.1002/prot.24647
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Crystal structure of a feruloyl esterase belonging to the tannase family: A disulfide bond near a catalytic triad.
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- Proteins, 2014, v. 82, n. 10, p. 2857, doi. 10.1002/prot.24649
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Burial of nonpolar surface area and thermodynamic stabilization of globins as a function of chain elongation.
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- Proteins, 2014, v. 82, n. 10, p. 2318, doi. 10.1002/prot.24590
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The recognition of membrane-bound PtdIns3 P by PX domains.
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- Proteins, 2014, v. 82, n. 10, p. 2332, doi. 10.1002/prot.24593
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The p66 immature precursor of HIV-1 reverse transcriptase.
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- Proteins, 2014, v. 82, n. 10, p. 2343, doi. 10.1002/prot.24594
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- Article
Glucose oxidase from Penicillium amagasakiense: Characterization of the transition state of its denaturation from molecular dynamics simulations.
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- Proteins, 2014, v. 82, n. 10, p. 2353, doi. 10.1002/prot.24596
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The solution structure of full-length dodecameric MCM by SANS and molecular modeling.
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- Proteins, 2014, v. 82, n. 10, p. 2364, doi. 10.1002/prot.24598
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How the folding rates of two- and multistate proteins depend on the amino acid properties.
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- Proteins, 2014, v. 82, n. 10, p. 2375, doi. 10.1002/prot.24599
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Specificity of a protein-protein interface: Local dynamics direct substrate recognition of effector caspases.
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- Proteins, 2014, v. 82, n. 10, p. 2887, doi. 10.1002/prot.24660
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RBRDetector: Improved prediction of binding residues on RNA-binding protein structures using complementary feature- and template-based strategies.
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- Proteins, 2014, v. 82, n. 10, p. 2455, doi. 10.1002/prot.24610
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Discovery of binding proteins for a protein target using protein-protein docking-based virtual screening.
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- Proteins, 2014, v. 82, n. 10, p. 2472, doi. 10.1002/prot.24611
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- Article
Temperature-accelerated molecular dynamics gives insights into globular conformations sampled in the free state of the AC catalytic domain.
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- Proteins, 2014, v. 82, n. 10, p. 2483, doi. 10.1002/prot.24612
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A detailed representation of electrostatic energy in prediction of sequence and pH dependence of protein stability.
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- Proteins, 2014, v. 82, n. 10, p. 2497, doi. 10.1002/prot.24613
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A multiscale model for simulating binding kinetics of proteins with flexible linkers.
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- Proteins, 2014, v. 82, n. 10, p. 2512, doi. 10.1002/prot.24614
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The modular structure of ThDP-dependent enzymes.
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- Proteins, 2014, v. 82, n. 10, p. 2523, doi. 10.1002/prot.24615
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Crystal structure of the C-terminal domain of mouse TLR9.
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- Proteins, 2014, v. 82, n. 10, p. 2874, doi. 10.1002/prot.24616
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Structure-based simulations reveal concerted dynamics of GPCR activation.
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- Proteins, 2014, v. 82, n. 10, p. 2538, doi. 10.1002/prot.24617
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Crystal structure of BinB: A receptor binding component of the binary toxin from Lysinibacillus sphaericus.
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- Proteins, 2014, v. 82, n. 10, p. 2703, doi. 10.1002/prot.24636
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- Article
Structures of mesophilic and extremophilic citrate synthases reveal rigidity and flexibility for function.
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- Proteins, 2014, v. 82, n. 10, p. 2657, doi. 10.1002/prot.24630
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Extracting representative structures from protein conformational ensembles.
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- Proteins, 2014, v. 82, n. 10, p. 2671, doi. 10.1002/prot.24633
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A multiscale approach to predicting affinity changes in protein-protein interfaces.
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- Proteins, 2014, v. 82, n. 10, p. 2681, doi. 10.1002/prot.24634
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Analysis of the linker region joining the adenylation and carrier protein domains of the modular nonribosomal peptide synthetases.
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- Proteins, 2014, v. 82, n. 10, p. 2691, doi. 10.1002/prot.24635
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Specific potassium ion interactions facilitate homocysteine binding to betaine-homocysteine S-methyltransferase.
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- Proteins, 2014, v. 82, n. 10, p. 2552, doi. 10.1002/prot.24619
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Hot-spot analysis to dissect the functional protein-protein interface of a tRNA-modifying enzyme.
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- Proteins, 2014, v. 82, n. 10, p. 2713, doi. 10.1002/prot.24637
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Structural insights into the stabilization of active, tetrameric DszC by its C-terminus.
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- Proteins, 2014, v. 82, n. 10, p. 2733, doi. 10.1002/prot.24638
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Molecular dynamics simulations of the auxin-binding protein 1 in complex with indole-3-acetic acid and naphthalen-1-acetic acid.
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- Proteins, 2014, v. 82, n. 10, p. 2744, doi. 10.1002/prot.24639
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