Works matching IS 08873585 AND DT 2012 AND VI 80 AND IP 1

Results: 28

Surface-histogram: A new shape descriptor for protein-protein docking.

Published in:

Proteins, 2012, v. 80, n. 1, p. 221, doi. 10.1002/prot.23192

By:

Gu, Shengyin;
Koehl, Patrice;
Hass, Joel;
Amenta, Nina

Publication type:

Article

Prots: A fragment based protein thermo-stability potential.

Published in:

Proteins, 2012, v. 80, n. 1, p. 81, doi. 10.1002/prot.23163

By:

Li, Yunqi;
Zhang, Jian;
Tai, David;
Russell Middaugh, C.;
Zhang, Yang;
Fang, Jianwen

Publication type:

Article

Sampling-based exploration of folded state of a protein under kinematic and geometric constraints.

Published in:

Proteins, 2012, v. 80, n. 1, p. 25, doi. 10.1002/prot.23134

By:

Yao, Peggy;
Zhang, Liangjun;
Latombe, Jean-Claude

Publication type:

Article

Crystal structure of glucuronic acid dehydrogeanse from Chromohalobacter salexigens.

Published in:

Proteins, 2012, v. 80, n. 1, p. 314, doi. 10.1002/prot.23167

By:

Ahn, Jae-Woo;
Lee, Shin Youp;
Kim, Sangwoo;
Kim, Suk Min;
Lee, Sun Bok;
Kim, Kyung-Jin

Publication type:

Article

Mutational analysis of m-values as a strategy to identify cold-resistant substructures of the protein ensemble.

Published in:

Proteins, 2012, v. 80, n. 1, p. 184, doi. 10.1002/prot.23178

By:

Campbell, James C.;
Whitten, Steven T.

Publication type:

Article

Role of different β-turns in β-hairpin conformation and stability studied by optical spectroscopy.

Published in:

Proteins, 2012, v. 80, n. 1, p. 44, doi. 10.1002/prot.23140

By:

Wu, Ling;
McElheny, Dan;
Setnicka, Vladimír;
Hilario, Jovencio;
Keiderling, Timothy A.

Publication type:

Article

Solution structure of gp17 from the Siphoviridae bacteriophage SPP1: Insights into its role in virion assembly.

Published in:

Proteins, 2012, v. 80, n. 1, p. 319, doi. 10.1002/prot.23191

By:

Chagot, Benjamin;
Auzat, Isabelle;
Gallopin, Matthieu;
Petitpas, Isabelle;
Gilquin, Bernard;
Tavares, Paulo;
Zinn-Justin, Sophie

Publication type:

Article

Structural mechanisms of constitutive activation in the C5a receptors with mutations in the extracellular loops: Molecular modeling study.

Published in:

Proteins, 2012, v. 80, n. 1, p. 71, doi. 10.1002/prot.23162

By:

Nikiforovich, Gregory V.;
Baranski, Thomas J.

Publication type:

Article

The interprotein scoring noises in glide docking scores.

Published in:

Proteins, 2012, v. 80, n. 1, p. 169, doi. 10.1002/prot.23173

By:

Wang, Wei;
Zhou, Xi;
He, Wanlin;
Fan, Yi;
Chen, Yuzong;
Chen, Xin

Publication type:

Article

How many ionizable groups can sit on a protein hydrophobic core?

Published in:

Proteins, 2012, v. 80, n. 1, p. 1, doi. 10.1002/prot.23166

By:

Garcia-Seisdedos, Hector;
Ibarra-Molero, Beatriz;
Sanchez-Ruiz, Jose M.

Publication type:

Article

Protein stability and in vivo concentration of missense mutations in phenylalanine hydroxylase.

Published in:

Proteins, 2012, v. 80, n. 1, p. 61, doi. 10.1002/prot.23159

By:

Shi, Zhen;
Sellers, Jenn;
Moult, John

Publication type:

Article

Predicting flexible loop regions that interact with ligands: The challenge of accurate scoring.

Published in:

Proteins, 2012, v. 80, n. 1, p. 246, doi. 10.1002/prot.23199

By:

Danielson, Matthew L.;
Lill, Markus A.

Publication type:

Article

Structural insight into mechanism and diverse substrate selection strategy of L-ribulokinase.

Published in:

Proteins, 2012, v. 80, n. 1, p. 261, doi. 10.1002/prot.23202

By:

Agarwal, Rakhi;
Burley, Stephen K.;
Swaminathan, Subramanyam

Publication type:

Article

Secondary-structure analysis of alcohol-denatured proteins by vacuum-ultraviolet circular dichroism spectroscopy.

Published in:

Proteins, 2012, v. 80, n. 1, p. 281, doi. 10.1002/prot.23206

By:

Matsuo, Koichi;
Sakurada, Yoshie;
Tate, Shin-ichi;
Namatame, Hirofumi;
Taniguchi, Masaki;
Gekko, Kunihiko

Publication type:

Article

Prescont: Predicting protein-protein interfaces utilizing four residue properties.

Published in:

Proteins, 2012, v. 80, n. 1, p. 154, doi. 10.1002/prot.23172

By:

Zellner, Hermann;
Staudigel, Martin;
Trenner, Thomas;
Bittkowski, Meik;
Wolowski, Vincent;
Icking, Christian;
Merkl, Rainer

Publication type:

Article

BSP-SLIM: A blind low-resolution ligand-protein docking approach using predicted protein structures.

Published in:

Proteins, 2012, v. 80, n. 1, p. 93, doi. 10.1002/prot.23165

By:

Lee, Hui Sun;
Zhang, Yang

Publication type:

Article

Tryptophan side chain conformers monitored by NMR and time-resolved fluorescence spectroscopies.

Published in:

Proteins, 2012, v. 80, n. 1, p. 239, doi. 10.1002/prot.23198

By:

Julien, Olivier;
Wang, Guoli;
Jonckheer, Abel;
Engelborghs, Yves;
Sykes, Brian D.

Publication type:

Article

A novel method for protein-protein interaction site prediction using phylogenetic substitution models.

Published in:

Proteins, 2012, v. 80, n. 1, p. 126, doi. 10.1002/prot.23169

By:

La, David;
Kihara, Daisuke

Publication type:

Article

On the molecular structure of human neuroserpin polymers.

Published in:

Proteins, 2012, v. 80, n. 1, p. 8, doi. 10.1002/prot.23197

By:

Santangelo, Maria Grazia;
Noto, Rosina;
Levantino, Matteo;
Cupane, Antonio;
Ricagno, Stefano;
Pezzullo, Margherita;
Bolognesi, Martino;
Mangione, Maria Rosalia;
Martorana, Vincenzo;
Manno, Mauro

Publication type:

Article

Crystal structure of the extracellular domain of human myelin protein zero.

Published in:

Proteins, 2012, v. 80, n. 1, p. 307, doi. 10.1002/prot.23164

By:

Liu, Zhigang;
Wang, Yong;
Yedidi, Ravikiran S.;
Brunzelle, Joseph S.;
Kovari, Iulia A.;
Sohi, Jasloveleen;
Kamholz, John;
Kovari, Ladislau C.

Publication type:

Article

Computational studies of LXR molecular interactions reveal an allosteric communication pathway.

Published in:

Proteins, 2012, v. 80, n. 1, p. 294, doi. 10.1002/prot.23209

By:

Burendahl, Sofia;
Nilsson, Lennart

Publication type:

Article

hCINAP is an atypical mammalian nuclear adenylate kinase with an ATPase motif: Structural and functional studies.

Published in:

Proteins, 2012, v. 80, n. 1, p. 206, doi. 10.1002/prot.23186

By:

Drakou, Christina E.;
Malekkou, Anna;
Hayes, Joseph M.;
Lederer, Carsten W.;
Leonidas, Demetres D.;
Oikonomakos, Nikos G.;
Lamond, Angus I.;
Santama, Niovi;
Zographos, Spyros E.

Publication type:

Article

A new residue-nucleotide propensity potential with structural information considered for discriminating protein-RNA docking decoys.

Published in:

Proteins, 2012, v. 80, n. 1, p. 14, doi. 10.1002/prot.23117

By:

Li, Chun Hua;
Cao, Li Bin;
Su, Ji Guo;
Yang, Yong Xiao;
Wang, Cun Xin

Publication type:

Article

Allosteric regulation of PKCθ: Understanding multistep phosphorylation and priming by ligands in AGC kinases.

Published in:

Proteins, 2012, v. 80, n. 1, p. 269, doi. 10.1002/prot.23205

By:

Seco, Jesus;
Ferrer-Costa, Carles;
Campanera, Josep M.;
Soliva, Robert;
Barril, Xavier

Publication type:

Article

The linear interaction energy method for the prediction of protein stability changes upon mutation.

Published in:

Proteins, 2012, v. 80, n. 1, p. 111, doi. 10.1002/prot.23168

By:

Wickstrom, Lauren;
Gallicchio, Emilio;
Levy, Ronald M.

Publication type:

Article

Modulated nicking endonuclease function by the N-terminal extended region of the smr domain in human Bcl-3 binding protein.

Published in:

Proteins, 2012, v. 80, n. 1, p. 327, doi. 10.1002/prot.23211

By:

Jeong, Eui Young;
Kim, Tae Gyun;
Ban, Changill

Publication type:

Article

SIDEpro: A novel machine learning approach for the fast and accurate prediction of side-chain conformations.

Published in:

Proteins, 2012, v. 80, n. 1, p. 142, doi. 10.1002/prot.23170

By:

Nagata, Ken;
Randall, Arlo;
Baldi, Pierre

Publication type:

Article

On the use of distance constraints in protein-protein docking computations.

Published in:

Proteins, 2012, v. 80, n. 1, p. 194, doi. 10.1002/prot.23179

By:

Shih, Edward S. C.;
Hwang, Ming-Jing

Publication type:

Article