Works matching IS 08873585 AND DT 2008 AND VI 70 AND IP 1

Results: 35

Crystal structure solution of a ParB-like nuclease at atomic resolution.
Published in:
Proteins, 2008, v. 70, n. 1, p. 263, doi. 10.1002/prot.21641
By:
- Shaw, Neil;
- Tempel, Wolfram;
- Chang, Jessie;
- Yang, Hua;
- Cheng, Chongyun;
- Ng, Joseph;
- Rose, John;
- Rao, Zihe;
- Wang, Bi-Cheng;
- Liu, Zhi-Jie
Publication type:
Article
Solution structure of FK506 binding domain (FKBD) of Plasmodium falciparum FK506 binding protein 35 (PfFKBP35).
Published in:
Proteins, 2008, v. 70, n. 1, p. 300, doi. 10.1002/prot.21623
By:
- Kang, Cong Bao;
- Ye, Hong;
- Yoon, Hye Rim;
- Yoon, Ho Sup
Publication type:
Article
Structural insight of the role of the Hahella chejuensis HapK protein in prodigiosin biosynthesis.
Published in:
Proteins, 2008, v. 70, n. 1, p. 257, doi. 10.1002/prot.21582
By:
- Cho, Hyo Je;
- Kim, Kyung-Jin;
- Kim, Myung Hee;
- Kang, Beom Sik
Publication type:
Article
The structure of flavin-dependent tryptophan 7-halogenase RebH.
Published in:
Proteins, 2008, v. 70, n. 1, p. 289, doi. 10.1002/prot.21627
By:
- Bitto, Eduard;
- Huang, Yu;
- Bingman, Craig A.;
- Singh, Shanteri;
- Thorson, Jon S.;
- Phillips, George N.
Publication type:
Article
Classification of conformational stability of protein mutants from 3D pseudo-folding graph representation of protein sequences using support vector machines.
Published in:
Proteins, 2008, v. 70, n. 1, p. 167, doi. 10.1002/prot.21524
By:
- Fernández, Michael;
- Caballero, Julio;
- Fernández, Leyden;
- Abreu, Jose Ignacio;
- Acosta, Gianco
Publication type:
Article
Crystal structure of Arabidopsis thaliana cytokinin dehydrogenase.
Published in:
Proteins, 2008, v. 70, n. 1, p. 303, doi. 10.1002/prot.21678
By:
- Bae, Euiyoung;
- Bingman, Craig A.;
- Bitto, Eduard;
- Aceti, David J.;
- Phillips, George N.
Publication type:
Article
Crystal structure of a monoclonal antibody directed against an antigenic determinant common to Ogawa and Inaba serotypes of Vibrio cholerae O1.
Published in:
Proteins, 2008, v. 70, n. 1, p. 284, doi. 10.1002/prot.21609
By:
- Ahmed, Firoz;
- André-Leroux, Gwénaëlle;
- Haouz, Ahmed;
- Boutonnier, Alain;
- Delepierre, Muriel;
- Qadri, Firdausi;
- Nato, Farida;
- Fournier, Jean-Michel;
- Alzari, Pedro M.
Publication type:
Article
Protein homology detection and fold inference through multiple alignment entropy profiles.
Published in:
Proteins, 2008, v. 70, n. 1, p. 248, doi. 10.1002/prot.21506
By:
- Sánchez-Flores, Alejandro;
- Pérez-Rueda, Ernesto;
- Segovia, Lorenzo
Publication type:
Article
Functional and structural characterization of the catalytic domain of the starch synthase III from Arabidopsis thaliana.
Published in:
Proteins, 2008, v. 70, n. 1, p. 31, doi. 10.1002/prot.21469
By:
- Busi, Maria V.;
- Palopoli, Nicolas;
- Valdez, Hugo A.;
- Fornasari, Maria S.;
- Wayllace, Nahuel Z.;
- Gomez-Casati, Diego F.;
- Parisi, Gustavo;
- Ugalde, Rodolfo A.
Publication type:
Article
Structural bioinformatics analysis of enzymes involved in the biosynthesis pathway of the hypermodified nucleoside ms2io6A37 in tRNA.
Published in:
Proteins, 2008, v. 70, n. 1, p. 1, doi. 10.1002/prot.21640
By:
- Kaminska, Katarzyna H.;
- Baraniak, Urszula;
- Boniecki, Michal;
- Nowaczyk, Katarzyna;
- Czerwoniec, Anna;
- Bujnicki, Janusz M.
Publication type:
Article
Crystal structure of the biotin carboxylase domain of human acetyl-CoA carboxylase 2.
Published in:
Proteins, 2008, v. 70, n. 1, p. 268, doi. 10.1002/prot.21611
By:
- Cho, Yong Soon;
- Lee, Jae Il;
- Shin, Dongkyu;
- Kim, Hyun Tae;
- Cheon, Young Hoon;
- Seo, Chang Il;
- Kim, Yong Eun;
- Hyun, Young-Lan;
- Lee, Yoon Sup;
- Sugiyama, Kanako;
- Park, Sam-Yong;
- Ro, Seonggu;
- Cho, Joong Myung;
- Lee, Tae Gyu;
- Heo, Yong-Seok
Publication type:
Article
Correction to the article 'Study of the Villin Headpiece folding dynamics by combining coarse-grained Monte Carlo evolution and all-atom molecular dynamics'.
Published in:
Proteins, 2008, v. 70, n. 1, p. 309, doi. 10.1002/prot.21725
By:
- Micheletti, Cristian;
- Colombo, Giorgio
Publication type:
Article
Identification of fungal oxaloacetate hydrolyase within the isocitrate lyase/PEP mutase enzyme superfamily using a sequence marker-based method.
Published in:
Proteins, 2008, v. 70, n. 1, p. 157, doi. 10.1002/prot.21622
By:
- Joosten, Henk-Jan;
- Han, Ying;
- Niu, Weiling;
- Vervoort, Jacques;
- Dunaway-Mariano, Debra;
- Schaap, Peter J.
Publication type:
Article
An NMA-guided path planning approach for computing large-amplitude conformational changes in proteins.
Published in:
Proteins, 2008, v. 70, n. 1, p. 131, doi. 10.1002/prot.21570
By:
- Kirillova, Svetlana;
- Cortés, Juan;
- Stefaniu, Alin;
- Siméon, Thierry
Publication type:
Article
Crystal structure of the mouse p53 core domain in zinc-free state.
Published in:
Proteins, 2008, v. 70, n. 1, p. 280, doi. 10.1002/prot.21608
By:
- Kwon, Eunju;
- Kim, Dong Young;
- Suh, Se Won;
- Kim, Kyeong Kyu
Publication type:
Article
A potential molecular switch in an α-helical coiled coil.
Published in:
Proteins, 2008, v. 70, n. 1, p. 25, doi. 10.1002/prot.21596
By:
- Laughton, Charles A.;
- Luisi, Ben F.;
- Pratap, J. Venkatesh;
- Calladine, Chris R.
Publication type:
Article
Dissecting contact potentials for proteins: Relative contributions of individual amino acids.
Published in:
Proteins, 2008, v. 70, n. 1, p. 119, doi. 10.1002/prot.21538
By:
- Buchete, N.-V.;
- Straub, J. E.;
- Thirumalai, D.
Publication type:
Article
Structure and quantum chemical analysis of NAD+-dependent isocitrate dehydrogenase: Hydride transfer and co-factor specificity.
Published in:
Proteins, 2008, v. 70, n. 1, p. 63, doi. 10.1002/prot.21486
By:
- Imada, Katsumi;
- Tamura, Takashi;
- Takenaka, Ryo;
- Kobayashi, Issei;
- Namba, Keiichi;
- Inagaki, Kenji
Publication type:
Article
Structure and dynamics of γ-SNAP: Insight into flexibility of proteins from the SNAP family.
Published in:
Proteins, 2008, v. 70, n. 1, p. 93, doi. 10.1002/prot.21468
By:
- Bitto, Eduard;
- Bingman, Craig A.;
- Kondrashov, Dmitry A.;
- McCoy, Jason G.;
- Bannen, Ryan M.;
- Wesenberg, Gary E.;
- Phillips, George N.
Publication type:
Article
Crystal structure of the endopolygalacturonase from the phytopathogenic fungus Colletotrichum lupini and its interaction with polygalacturonase-inhibiting proteins.
Published in:
Proteins, 2008, v. 70, n. 1, p. 294, doi. 10.1002/prot.21610
By:
- Bonivento, Daniele;
- Pontiggia, Daniela;
- Matteo, Adele Di;
- Fernandez-Recio, Juan;
- Salvi, Gianni;
- Tsernoglou, Demetrius;
- Cervone, Felice;
- Lorenzo, Giulia De;
- Federici, Luca
Publication type:
Article
Modulation of human cytidine deaminase by specific aminoacids involved in the intersubunit interactions.
Published in:
Proteins, 2008, v. 70, n. 1, p. 144, doi. 10.1002/prot.21533
By:
- Vincenzetti, S.;
- Quadrini, B.;
- Mariani, P.;
- De Sanctis, G.;
- Cammertoni, N.;
- Polzonetti, V.;
- Pucciarelli, S.;
- Natalini, P.;
- Vita, A.
Publication type:
Article
Modeling the structure of mAb 14B7 bound to the anthrax protective antigen.
Published in:
Proteins, 2008, v. 70, n. 1, p. 218, doi. 10.1002/prot.21595
By:
- Sivasubramanian, Arvind;
- Maynard, Jennifer A.;
- Gray, Jeffrey J.
Publication type:
Article
High resolution X-ray crystallographic structure of bovine heart cytochrome c and its application to the design of an electron transfer biosensor.
Published in:
Proteins, 2008, v. 70, n. 1, p. 83, doi. 10.1002/prot.21452
By:
- Mirkin, Nurit;
- Jaconcic, Jean;
- Stojanoff, Vivian;
- Moreno, Abel
Publication type:
Article
Structures of dimeric dihydrodiol dehydrogenase apoenzyme and inhibitor complex: Probing the subunit interface with site-directed mutagenesis.
Published in:
Proteins, 2008, v. 70, n. 1, p. 176, doi. 10.1002/prot.21566
By:
- Carbone, Vincenzo;
- Endo, Satoshi;
- Sumii, Rie;
- Chung, Roland P.-T.;
- Matsunaga, Toshiyuki;
- Hara, Akira;
- El-Kabbani, Ossama
Publication type:
Article
A comparison of SCOP and CATH with respect to domain-domain interactions.
Published in:
Proteins, 2008, v. 70, n. 1, p. 54, doi. 10.1002/prot.21496
By:
- Jefferson, Emily R.;
- Walsh, Thomas P.;
- Barton, Geoffrey J.
Publication type:
Article
Protein-inhibitor flexible docking by a multicanonical sampling: Native complex structure with the lowest free energy and a free-energy barrier distinguishing the native complex from the others.
Published in:
Proteins, 2008, v. 70, n. 1, p. 41, doi. 10.1002/prot.21409
By:
- Kamiya, Narutoshi;
- Yonezawa, Yasushige;
- Nakamura, Haruki;
- Higo, Junichi
Publication type:
Article
Investigating the structural stability of the Tup1-interaction domain of Ssn6: Evidence for a conformational change on the complex.
Published in:
Proteins, 2008, v. 70, n. 1, p. 72, doi. 10.1002/prot.21489
By:
- Palaiomylitou, Maria;
- Tartas, Athanassios;
- Vlachakis, Dimitrios;
- Tzamarias, Dimitris;
- Vlassi, Metaxia
Publication type:
Article
Crystal structure of aminopeptidase N from human pathogen Neisseria meningitidis.
Published in:
Proteins, 2008, v. 70, n. 1, p. 273, doi. 10.1002/prot.21276
By:
- Nocek, B.;
- Mulligan, R.;
- Bargassa, M.;
- Collart, F.;
- Joachimiak, A.
Publication type:
Article
Correction of 'Dynamical behavior of the vascular endothelial growth factor: Biological implications'.
Published in:
Proteins, 2008, v. 70, n. 1, p. 307, doi. 10.1002/prot.21716
By:
- Horta, Bruno A. C.;
- Cirino, José J. V.;
- de Alencastro, Ricardo B.
Publication type:
Article
Beyond Lumry-Eyring: An unexpected pattern of operational reversibility/irreversibility in protein denaturation.
Published in:
Proteins, 2008, v. 70, n. 1, p. 19, doi. 10.1002/prot.21572
By:
- Rodriguez-Larrea, David;
- Ibarra-Molero, Beatriz;
- de Maria, Leonardo;
- Borchert, Torben V.;
- Sanchez-Ruiz, Jose M.
Publication type:
Article
The X-ray crystallographic structure and activity analysis of a Pseudomonas-specific subfamily of the HAD enzyme superfamily evidences a novel biochemical function.
Published in:
Proteins, 2008, v. 70, n. 1, p. 197, doi. 10.1002/prot.21583
By:
- Peisach, Ezra;
- Wang, Liangbing;
- Burroughs, A. Maxwell;
- Aravind, L.;
- Dunaway-Mariano, Debra;
- Allen, Karen N.
Publication type:
Article
Exploring the role of large conformational changes in the fidelity of DNA polymerase β.
Published in:
Proteins, 2008, v. 70, n. 1, p. 231, doi. 10.1002/prot.21668
By:
- Xiang, Yun;
- Goodman, Myron F.;
- Beard, William A.;
- Wilson, Samuel H.;
- Warshel, Arieh
Publication type:
Article
Amino acid pairing at the N- and C-termini of helical segments in proteins.
Published in:
Proteins, 2008, v. 70, n. 1, p. 188, doi. 10.1002/prot.21525
By:
- Fonseca, Nuno A.;
- Camacho, Rui;
- Magalhães, A. L.
Publication type:
Article
Prediction of transition metal-binding sites from apo protein structures.
Published in:
Proteins, 2008, v. 70, n. 1, p. 208, doi. 10.1002/prot.21587
By:
- Babor, Mariana;
- Gerzon, Sergey;
- Raveh, Barak;
- Sobolev, Vladimir;
- Edelman, Marvin
Publication type:
Article
Assessing model accuracy using the homology modeling automatically software.
Published in:
Proteins, 2008, v. 70, n. 1, p. 105, doi. 10.1002/prot.21466
By:
- Bhattacharya, Aneerban;
- Wunderlich, Zeba;
- Monleon, Daniel;
- Tejero, Roberto;
- Montelione, Gaetano T.
Publication type:
Article

Works matching IS 08873585 AND DT 2008 AND VI 70 AND IP 1

Crystal structure solution of a ParB-like nuclease at atomic resolution.

Solution structure of FK506 binding domain (FKBD) of Plasmodium falciparum FK506 binding protein 35 (PfFKBP35).

Structural insight of the role of the Hahella chejuensis HapK protein in prodigiosin biosynthesis.

The structure of flavin-dependent tryptophan 7-halogenase RebH.

Classification of conformational stability of protein mutants from 3D pseudo-folding graph representation of protein sequences using support vector machines.

Crystal structure of Arabidopsis thaliana cytokinin dehydrogenase.

Crystal structure of a monoclonal antibody directed against an antigenic determinant common to Ogawa and Inaba serotypes of Vibrio cholerae O1.

Protein homology detection and fold inference through multiple alignment entropy profiles.

Functional and structural characterization of the catalytic domain of the starch synthase III from Arabidopsis thaliana.

Structural bioinformatics analysis of enzymes involved in the biosynthesis pathway of the hypermodified nucleoside ms<sup>2</sup>io<sup>6</sup>A37 in tRNA.

Crystal structure of the biotin carboxylase domain of human acetyl-CoA carboxylase 2.

Correction to the article 'Study of the Villin Headpiece folding dynamics by combining coarse-grained Monte Carlo evolution and all-atom molecular dynamics'.

Identification of fungal oxaloacetate hydrolyase within the isocitrate lyase/PEP mutase enzyme superfamily using a sequence marker-based method.

An NMA-guided path planning approach for computing large-amplitude conformational changes in proteins.

Crystal structure of the mouse p53 core domain in zinc-free state.

A potential molecular switch in an α-helical coiled coil.

Dissecting contact potentials for proteins: Relative contributions of individual amino acids.

Structure and quantum chemical analysis of NAD<sup>+</sup>-dependent isocitrate dehydrogenase: Hydride transfer and co-factor specificity.

Structure and dynamics of γ-SNAP: Insight into flexibility of proteins from the SNAP family.

Crystal structure of the endopolygalacturonase from the phytopathogenic fungus Colletotrichum lupini and its interaction with polygalacturonase-inhibiting proteins.

Modulation of human cytidine deaminase by specific aminoacids involved in the intersubunit interactions.

Modeling the structure of mAb 14B7 bound to the anthrax protective antigen.

High resolution X-ray crystallographic structure of bovine heart cytochrome c and its application to the design of an electron transfer biosensor.

Structures of dimeric dihydrodiol dehydrogenase apoenzyme and inhibitor complex: Probing the subunit interface with site-directed mutagenesis.

A comparison of SCOP and CATH with respect to domain-domain interactions.

Protein-inhibitor flexible docking by a multicanonical sampling: Native complex structure with the lowest free energy and a free-energy barrier distinguishing the native complex from the others.

Investigating the structural stability of the Tup1-interaction domain of Ssn6: Evidence for a conformational change on the complex.

Crystal structure of aminopeptidase N from human pathogen Neisseria meningitidis.

Correction of 'Dynamical behavior of the vascular endothelial growth factor: Biological implications'.

Beyond Lumry-Eyring: An unexpected pattern of operational reversibility/irreversibility in protein denaturation.

The X-ray crystallographic structure and activity analysis of a Pseudomonas-specific subfamily of the HAD enzyme superfamily evidences a novel biochemical function.

Exploring the role of large conformational changes in the fidelity of DNA polymerase β.

Amino acid pairing at the N- and C-termini of helical segments in proteins.

Prediction of transition metal-binding sites from apo protein structures.

Assessing model accuracy using the homology modeling automatically software.